RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
HDAC7-230ENST00000552960 CHMLP26374 656 aa14.88□□□□□ -0.03
HDAC7-230ENST00000552960 TAF7Q15545 349 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-230ENST00000552960 EIF2S2P20042 333 aaKnown RBP14.87□□□□□ -0.03
HDAC7-230ENST00000552960 SPC24Q8NBT2 197 aa14.87□□□□□ -0.03
HDAC7-230ENST00000552960 STK31Q9BXU1 1019 aa14.87□□□□□ -0.03
HDAC7-230ENST00000552960 ALS2Q96Q42 1657 aa14.87□□□□□ -0.03
HDAC7-230ENST00000552960 RGS12O14924 1447 aa14.86□□□□□ -0.03
HDAC7-230ENST00000552960 PTPRCP08575 1304 aa14.86□□□□□ -0.03
HDAC7-230ENST00000552960 CBX1P83916 185 aa14.86□□□□□ -0.03
HDAC7-230ENST00000552960 NOLC1Q14978 699 aaKnown RBP eCLIP14.86□□□□□ -0.03
HDAC7-230ENST00000552960 WDR33Q9C0J8 1336 aaKnown RBP14.86□□□□□ -0.03
HDAC7-230ENST00000552960 DDX54Q8TDD1 881 aaKnown RBP14.86□□□□□ -0.03
HDAC7-230ENST00000552960 SRCIN1Q9C0H9 1055 aa14.86□□□□□ -0.03
HDAC7-230ENST00000552960 DCCP43146 1447 aa14.86□□□□□ -0.03
HDAC7-230ENST00000552960 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
HDAC7-230ENST00000552960 CPA1P15085 419 aa14.85□□□□□ -0.03
HDAC7-230ENST00000552960 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
HDAC7-230ENST00000552960 BCL11BQ9C0K0 894 aaPredicted RBP14.85□□□□□ -0.03
HDAC7-230ENST00000552960 IL25Q9H293 177 aa14.85□□□□□ -0.03
HDAC7-230ENST00000552960 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
HDAC7-230ENST00000552960 CUL4AQ13619 759 aa14.85□□□□□ -0.03
HDAC7-230ENST00000552960 KIF1AQ12756 1690 aa14.85□□□□□ -0.03
HDAC7-230ENST00000552960 LRRFIP2Q9Y608 721 aaKnown RBP14.85□□□□□ -0.03
HDAC7-230ENST00000552960 CCT4P50991 539 aaKnown RBP14.84□□□□□ -0.03
HDAC7-230ENST00000552960 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
HDAC7-230ENST00000552960 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
HDAC7-230ENST00000552960 MTERF4Q7Z6M4 381 aaKnown RBP14.84□□□□□ -0.03
HDAC7-230ENST00000552960 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 HTATSF1O43719 755 aaKnown RBP14.83□□□□□ -0.04
HDAC7-230ENST00000552960 AKAP4Q5JQC9 854 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 OSBPL3Q9H4L5 887 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 BTBD11A6QL63 1104 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 RNMTO43148 476 aaKnown RBP14.83□□□□□ -0.04
HDAC7-230ENST00000552960 TEFQ10587 303 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 CCDC183Q5T5S1 534 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 MYRIPQ8NFW9 859 aa14.83□□□□□ -0.04
HDAC7-230ENST00000552960 INTS4Q96HW7 963 aaKnown RBP14.83□□□□□ -0.04
HDAC7-230ENST00000552960 C1orf141Q5JVX7 400 aa14.82□□□□□ -0.04
HDAC7-230ENST00000552960 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
HDAC7-230ENST00000552960 SMC3Q9UQE7 1217 aa14.82□□□□□ -0.04
HDAC7-230ENST00000552960 TCHHQ07283 1943 aa14.82□□□□□ -0.04
HDAC7-230ENST00000552960 IGSF3O75054 1194 aa14.82□□□□□ -0.04
HDAC7-230ENST00000552960 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
HDAC7-230ENST00000552960 PRDM11Q9NQV5 511 aa14.82□□□□□ -0.04
HDAC7-230ENST00000552960 MEGF6O75095 1541 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 VPS37CA5D8V6 355 aaPredicted RBP14.81□□□□□ -0.04
HDAC7-230ENST00000552960 EIF4A1P60842 406 aaKnown RBP14.81□□□□□ -0.04
HDAC7-230ENST00000552960 CWC27Q6UX04 472 aaKnown RBP14.81□□□□□ -0.04
HDAC7-230ENST00000552960 STRN4Q9NRL3 753 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 FLIIQ13045 1269 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 PIBF1Q8WXW3 757 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 HDGFL1Q5TGJ6 251 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 RAPGEF4Q8WZA2 1011 aa14.81□□□□□ -0.04
HDAC7-230ENST00000552960 FAM184AQ8NB25 1140 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 CCDC94Q9BW85 323 aaPredicted RBP14.8□□□□□ -0.04
HDAC7-230ENST00000552960 SOS2Q07890 1332 aaPredicted RBP14.8□□□□□ -0.04
HDAC7-230ENST00000552960 STX6O43752 255 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 GNAI3P08754 354 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 SYT1P21579 422 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 ANAPC15P60006 121 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 PPP4R3BQ5MIZ7 849 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 CCDC83Q8IWF9 413 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
HDAC7-230ENST00000552960 AK2P54819 239 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 CHPF2Q9P2E5 772 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 LRRC37A3O60309 1634 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 A0A0G2JS52 829 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 CYP27B1O15528 508 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 UBTFL1P0CB47 393 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 ZSCAN22P10073 491 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 PIP4K2AP48426 406 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 PROSER3Q2NL68 480 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 NFATC2IPQ8NCF5 419 aa14.79□□□□□ -0.04
HDAC7-230ENST00000552960 PHRF1Q9P1Y6 1649 aaKnown RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 HMGN5P82970 282 aaKnown RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 OS9Q13438 667 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-230ENST00000552960 CASTP20810 708 aaKnown RBP14.78□□□□□ -0.04
HDAC7-230ENST00000552960 ATP8B2P98198 1209 aa14.78□□□□□ -0.04
HDAC7-230ENST00000552960 CAMK4Q16566 473 aa14.78□□□□□ -0.04
HDAC7-230ENST00000552960 AMOTQ4VCS5 1084 aa14.78□□□□□ -0.04
HDAC7-230ENST00000552960 FERMT3Q86UX7 667 aa14.78□□□□□ -0.04
HDAC7-230ENST00000552960 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
HDAC7-230ENST00000552960 DRC7Q8IY82 874 aa14.78□□□□□ -0.04
HDAC7-230ENST00000552960 KDM4AO75164 1064 aa14.77□□□□□ -0.04
HDAC7-230ENST00000552960 CHAF1AQ13111 956 aaPredicted RBP14.77□□□□□ -0.04
HDAC7-230ENST00000552960 CCDC30Q5VVM6 783 aa14.77□□□□□ -0.04
HDAC7-230ENST00000552960 ZNF710Q8N1W2 664 aa14.77□□□□□ -0.04
HDAC7-230ENST00000552960 NCAPD2Q15021 1401 aa14.77□□□□□ -0.04
HDAC7-230ENST00000552960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.77□□□□□ -0.04
HDAC7-230ENST00000552960 UBE2HP62256 183 aa14.77□□□□□ -0.04
HDAC7-230ENST00000552960 TOM1L2Q6ZVM7 507 aa14.77□□□□□ -0.04
HDAC7-230ENST00000552960 SMAP1Q8IYB5 467 aaPredicted RBP14.77□□□□□ -0.04
HDAC7-230ENST00000552960 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
HDAC7-230ENST00000552960 LARP1Q6PKG0 1096 aaKnown RBP14.77□□□□□ -0.05
HDAC7-230ENST00000552960 PRIMPOLQ96LW4 560 aa14.77□□□□□ -0.05
HDAC7-230ENST00000552960 SNX14Q9Y5W7 946 aa14.77□□□□□ -0.05
HDAC7-230ENST00000552960 PHKG2P15735 406 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms