RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
CDK4-214ENST00000552862 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
CDK4-214ENST00000552862 SRGNP10124 158 aa16.5■□□□□ 0.23
CDK4-214ENST00000552862 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
CDK4-214ENST00000552862 C21orf2O43822 256 aa16.49■□□□□ 0.23
CDK4-214ENST00000552862 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
CDK4-214ENST00000552862 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
CDK4-214ENST00000552862 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
CDK4-214ENST00000552862 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
CDK4-214ENST00000552862 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDK4-214ENST00000552862 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
CDK4-214ENST00000552862 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
CDK4-214ENST00000552862 NRXN2Q9P2S2 1712 aa16.48■□□□□ 0.23
CDK4-214ENST00000552862 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
CDK4-214ENST00000552862 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
CDK4-214ENST00000552862 KLRG2A4D1S0 409 aaPredicted RBP16.47■□□□□ 0.23
CDK4-214ENST00000552862 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
CDK4-214ENST00000552862 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
CDK4-214ENST00000552862 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
CDK4-214ENST00000552862 JDP2Q8WYK2 163 aa16.46■□□□□ 0.23
CDK4-214ENST00000552862 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
CDK4-214ENST00000552862 NFKBIEO00221 500 aa16.45■□□□□ 0.22
CDK4-214ENST00000552862 RASSF7Q02833 373 aa16.45■□□□□ 0.22
CDK4-214ENST00000552862 RALBP1Q15311 655 aa16.45■□□□□ 0.22
CDK4-214ENST00000552862 MCM10Q7L590 875 aa16.45■□□□□ 0.22
CDK4-214ENST00000552862 VPS33BQ9H267 617 aa16.45■□□□□ 0.22
CDK4-214ENST00000552862 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
CDK4-214ENST00000552862 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
CDK4-214ENST00000552862 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDK4-214ENST00000552862 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
CDK4-214ENST00000552862 PARP10Q53GL7 1025 aa16.43■□□□□ 0.22
CDK4-214ENST00000552862 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
CDK4-214ENST00000552862 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
CDK4-214ENST00000552862 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
CDK4-214ENST00000552862 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
CDK4-214ENST00000552862 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
CDK4-214ENST00000552862 L3MBTL3Q96JM7 780 aaPredicted RBP16.41■□□□□ 0.22
CDK4-214ENST00000552862 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
CDK4-214ENST00000552862 SBF1O95248 1867 aa16.41■□□□□ 0.22
CDK4-214ENST00000552862 KCNQ3O43525 872 aa16.4■□□□□ 0.22
CDK4-214ENST00000552862 RBM17Q96I25 401 aaKnown RBP16.4■□□□□ 0.22
CDK4-214ENST00000552862 PSMD1Q99460 953 aa16.4■□□□□ 0.22
CDK4-214ENST00000552862 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
CDK4-214ENST00000552862 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
CDK4-214ENST00000552862 IBTKQ9P2D0 1353 aaPredicted RBP16.39■□□□□ 0.21
CDK4-214ENST00000552862 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
CDK4-214ENST00000552862 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
CDK4-214ENST00000552862 EIF6P56537 245 aaKnown RBP16.39■□□□□ 0.21
CDK4-214ENST00000552862 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
CDK4-214ENST00000552862 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
CDK4-214ENST00000552862 HACL1Q9UJ83 578 aa16.39■□□□□ 0.21
CDK4-214ENST00000552862 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
CDK4-214ENST00000552862 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
CDK4-214ENST00000552862 GPC2Q8N158 579 aa16.38■□□□□ 0.21
CDK4-214ENST00000552862 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
CDK4-214ENST00000552862 CRAMP1Q96RY5 1269 aa16.38■□□□□ 0.21
CDK4-214ENST00000552862 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
CDK4-214ENST00000552862 SIPA1L3O60292 1781 aaPredicted RBP16.37■□□□□ 0.21
CDK4-214ENST00000552862 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
CDK4-214ENST00000552862 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
CDK4-214ENST00000552862 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
CDK4-214ENST00000552862 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
CDK4-214ENST00000552862 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
CDK4-214ENST00000552862 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
CDK4-214ENST00000552862 DCTN1Q14203 1278 aa16.36■□□□□ 0.21
CDK4-214ENST00000552862 CRY2Q49AN0 593 aa16.36■□□□□ 0.21
CDK4-214ENST00000552862 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
CDK4-214ENST00000552862 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
CDK4-214ENST00000552862 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
CDK4-214ENST00000552862 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
CDK4-214ENST00000552862 BBOX1O75936 387 aa16.35■□□□□ 0.21
CDK4-214ENST00000552862 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
CDK4-214ENST00000552862 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
CDK4-214ENST00000552862 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
CDK4-214ENST00000552862 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
CDK4-214ENST00000552862 WDR90Q96KV7 1748 aa16.35■□□□□ 0.21
CDK4-214ENST00000552862 FZD9O00144 591 aa16.34■□□□□ 0.21
CDK4-214ENST00000552862 RIPK4P57078 832 aa16.34■□□□□ 0.21
CDK4-214ENST00000552862 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
CDK4-214ENST00000552862 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
CDK4-214ENST00000552862 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
CDK4-214ENST00000552862 TAF1DQ9H5J8 278 aaPredicted RBP16.34■□□□□ 0.21
CDK4-214ENST00000552862 RIC1Q4ADV7 1423 aa16.34■□□□□ 0.21
CDK4-214ENST00000552862 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.2
CDK4-214ENST00000552862 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
CDK4-214ENST00000552862 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
CDK4-214ENST00000552862 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
CDK4-214ENST00000552862 FAM177BA6PVY3 158 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 POTECB2RU33 542 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 MYL6BP14649 208 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 EPHX2P34913 555 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 HLFQ16534 295 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
CDK4-214ENST00000552862 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
CDK4-214ENST00000552862 HOXB7P09629 217 aa16.31■□□□□ 0.2
CDK4-214ENST00000552862 PRELPP51888 382 aa16.31■□□□□ 0.2
CDK4-214ENST00000552862 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDK4-214ENST00000552862 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms