RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 KLRG1Q96E93 195 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 AK7Q96M32 723 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 V9GY48 417 aaPredicted RBP7.66□□□□□ -1.18
HOXB3-213ENST00000552000 CD163L1Q9NR16 1453 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.65□□□□□ -1.18
HOXB3-213ENST00000552000 FBLN1P23142 703 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 AMPHP49418 695 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 PRELPP51888 382 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 PDE4DIPQ5VU43 2346 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 HDGFL2Q7Z4V5 671 aaPredicted RBP7.65□□□□□ -1.18
HOXB3-213ENST00000552000 USHBP1Q8N6Y0 703 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 PALLDQ8WX93 1383 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 SLC12A5Q9H2X9 1139 aa7.65□□□□□ -1.18
HOXB3-213ENST00000552000 ITGB4P16144 1822 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 N4BP2Q86UW6 1770 aaPredicted RBP7.64□□□□□ -1.19
HOXB3-213ENST00000552000 C4BP0C0L5 1744 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 TOGARAM1Q9Y4F4 1720 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 CICQ96RK0 1608 aaPredicted RBP7.64□□□□□ -1.19
HOXB3-213ENST00000552000 EDC4Q6P2E9 1401 aaKnown RBP7.64□□□□□ -1.19
HOXB3-213ENST00000552000 ROCK2O75116 1388 aaKnown RBP7.64□□□□□ -1.19
HOXB3-213ENST00000552000 MAP3K19Q56UN5 1328 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 HOXC9P31274 260 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 MPRIPQ6WCQ1 1025 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 ARHGAP27Q6ZUM4 889 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 JMYQ8N9B5 988 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 RBM46Q8TBY0 533 aaKnown RBP7.64□□□□□ -1.19
HOXB3-213ENST00000552000 BCS1LQ9Y276 419 aa7.64□□□□□ -1.19
HOXB3-213ENST00000552000 TJAP1Q5JTD0 557 aa7.63□□□□□ -1.19
HOXB3-213ENST00000552000 NBPF6Q5VWK0 638 aa7.63□□□□□ -1.19
HOXB3-213ENST00000552000 PPP1R18Q6NYC8 613 aa7.63□□□□□ -1.19
HOXB3-213ENST00000552000 C16orf71Q8IYS4 520 aaPredicted RBP7.63□□□□□ -1.19
HOXB3-213ENST00000552000 RAPGEF4Q8WZA2 1011 aa7.63□□□□□ -1.19
HOXB3-213ENST00000552000 NBPF4Q96M43 638 aa7.63□□□□□ -1.19
HOXB3-213ENST00000552000 IL21Q9HBE4 155 aa7.63□□□□□ -1.19
HOXB3-213ENST00000552000 PXDNLA1KZ92 1463 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 A0A1W2PP64 1363 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 A0A0G2JLW4 131 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 GTPBP6O43824 516 aaPredicted RBP7.62□□□□□ -1.19
HOXB3-213ENST00000552000 MMP10P09238 476 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 TATP17735 454 aaPredicted RBP7.62□□□□□ -1.19
HOXB3-213ENST00000552000 HMGB2P26583 209 aaKnown RBP7.62□□□□□ -1.19
HOXB3-213ENST00000552000 SSFA2P28290 1259 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 SMARCC1Q92922 1105 aaPredicted RBP7.62□□□□□ -1.19
HOXB3-213ENST00000552000 MTRQ99707 1265 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 TERF2IPQ9NYB0 399 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 KIF13BQ9NQT8 1826 aa7.62□□□□□ -1.19
HOXB3-213ENST00000552000 NSD3Q9BZ95 1437 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 CGNL1Q0VF96 1302 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 PCDH11XQ9BZA7 1347 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 PCDH11YQ9BZA8 1340 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 CYP27B1O15528 508 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 FCHSD2O94868 740 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 FSTL1Q12841 308 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 C9orf131Q5VYM1 1079 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 LINC00116Q8NCU8 138 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 COG3Q96JB2 828 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 MAP2P11137 1827 aaKnown RBP7.61□□□□□ -1.19
HOXB3-213ENST00000552000 KIAA1551Q9HCM1 1747 aa7.61□□□□□ -1.19
HOXB3-213ENST00000552000 BRCA1P38398 1863 aaKnown RBP7.6□□□□□ -1.19
HOXB3-213ENST00000552000 LOC102724428A0A0B4J2F2 783 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 DPYSL4O14531 572 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 GNPATO15228 680 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 MAP3K7O43318 606 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 DPEP1P16444 411 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 SIK1P57059 783 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 RRS1Q15050 365 aaKnown RBP7.6□□□□□ -1.19
HOXB3-213ENST00000552000 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 PIGBQ92521 554 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 DDX12PQ92771 950 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 ZNF775Q96BV0 537 aaPredicted RBP7.6□□□□□ -1.19
HOXB3-213ENST00000552000 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
HOXB3-213ENST00000552000 SBF1O95248 1867 aa7.6□□□□□ -1.19
HOXB3-213ENST00000552000 ARFGEF1Q9Y6D6 1849 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 KCPQ6ZWJ8 1503 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 RNF40O75150 1001 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 HSPA1AP0DMV8 641 aaKnown RBP7.59□□□□□ -1.19
HOXB3-213ENST00000552000 HSPA1BP0DMV9 641 aaKnown RBP7.59□□□□□ -1.19
HOXB3-213ENST00000552000 GGCXP38435 758 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 TGFB2P61812 414 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 TSKSQ9UJT2 592 aa7.59□□□□□ -1.19
HOXB3-213ENST00000552000 RTL1A6NKG5 1358 aa7.59□□□□□ -1.2
HOXB3-213ENST00000552000 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.2
HOXB3-213ENST00000552000 PKD1L3Q7Z443 1732 aa7.58□□□□□ -1.2
HOXB3-213ENST00000552000 ITPK1Q13572 414 aa7.58□□□□□ -1.2
HOXB3-213ENST00000552000 NBR1Q14596 966 aa7.58□□□□□ -1.2
HOXB3-213ENST00000552000 SIN3AQ96ST3 1273 aa7.58□□□□□ -1.2
HOXB3-213ENST00000552000 C10orf71Q711Q0 1435 aa7.58□□□□□ -1.2
HOXB3-213ENST00000552000 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
HOXB3-213ENST00000552000 KDM2BQ8NHM5 1336 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 MYH14Q7Z406 1995 aaKnown RBP7.57□□□□□ -1.2
HOXB3-213ENST00000552000 ATP6V1AP38606 617 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 TMF1P82094 1093 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 NEUROD1Q13562 356 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 HSP90AB2PQ58FF8 381 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 SMC1BQ8NDV3 1235 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms