RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 NARFQ9UHQ1 456 aa22.51■■□□□ 1.19
CDK4-208ENST00000551706 WDR63Q8IWG1 891 aa22.5■■□□□ 1.19
CDK4-208ENST00000551706 SMC1BQ8NDV3 1235 aa22.5■■□□□ 1.19
CDK4-208ENST00000551706 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
CDK4-208ENST00000551706 ERBB4Q15303 1308 aa22.5■■□□□ 1.19
CDK4-208ENST00000551706 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
CDK4-208ENST00000551706 LAMB4A4D0S4 1761 aa22.49■■□□□ 1.19
CDK4-208ENST00000551706 HOXB7P09629 217 aa22.49■■□□□ 1.19
CDK4-208ENST00000551706 HSPA1AP0DMV8 641 aaKnown RBP22.49■■□□□ 1.19
CDK4-208ENST00000551706 HSPA1BP0DMV9 641 aaKnown RBP22.49■■□□□ 1.19
CDK4-208ENST00000551706 SRP68Q9UHB9 627 aaKnown RBP22.49■■□□□ 1.19
CDK4-208ENST00000551706 SALL2Q9Y467 1007 aaPredicted RBP22.49■■□□□ 1.19
CDK4-208ENST00000551706 C4AP0C0L4 1744 aa22.48■■□□□ 1.19
CDK4-208ENST00000551706 RNF181Q9P0P0 153 aa22.48■■□□□ 1.19
CDK4-208ENST00000551706 TNRC6CQ9HCJ0 1690 aaKnown RBP22.48■■□□□ 1.19
CDK4-208ENST00000551706 USPL1Q5W0Q7 1092 aa22.47■■□□□ 1.19
CDK4-208ENST00000551706 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
CDK4-208ENST00000551706 KCNA3P22001 575 aa22.46■■□□□ 1.19
CDK4-208ENST00000551706 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
CDK4-208ENST00000551706 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
CDK4-208ENST00000551706 PIM2Q9P1W9 311 aa22.46■■□□□ 1.19
CDK4-208ENST00000551706 PARP3Q9Y6F1 533 aa22.46■■□□□ 1.19
CDK4-208ENST00000551706 EIF2S2P20042 333 aaKnown RBP22.45■■□□□ 1.18
CDK4-208ENST00000551706 PIP4K2AP48426 406 aaPredicted RBP22.45■■□□□ 1.18
CDK4-208ENST00000551706 FKBP8Q14318 412 aa22.45■■□□□ 1.18
CDK4-208ENST00000551706 KRT24Q2M2I5 525 aa22.44■■□□□ 1.18
CDK4-208ENST00000551706 DUSP27Q5VZP5 1158 aa22.44■■□□□ 1.18
CDK4-208ENST00000551706 DZIP3Q86Y13 1208 aaKnown RBP22.44■■□□□ 1.18
CDK4-208ENST00000551706 CHMP4AQ9BY43 222 aa22.44■■□□□ 1.18
CDK4-208ENST00000551706 TBC1D2BQ9UPU7 963 aa22.44■■□□□ 1.18
CDK4-208ENST00000551706 RGL2O15211 777 aa22.43■■□□□ 1.18
CDK4-208ENST00000551706 DALRD3Q5D0E6 543 aaKnown RBP22.43■■□□□ 1.18
CDK4-208ENST00000551706 HDGFL1Q5TGJ6 251 aa22.42■■□□□ 1.18
CDK4-208ENST00000551706 CAMTA2O94983 1202 aa22.41■■□□□ 1.18
CDK4-208ENST00000551706 BCL2L12Q9HB09 334 aa22.41■■□□□ 1.18
CDK4-208ENST00000551706 ZNF652Q9Y2D9 606 aa22.41■■□□□ 1.18
CDK4-208ENST00000551706 MYL6BP14649 208 aa22.4■■□□□ 1.18
CDK4-208ENST00000551706 TM4SF1P30408 202 aa22.4■■□□□ 1.18
CDK4-208ENST00000551706 CLEC4GQ6UXB4 293 aa22.4■■□□□ 1.18
CDK4-208ENST00000551706 TSR2Q969E8 191 aaKnown RBP22.4■■□□□ 1.18
CDK4-208ENST00000551706 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
CDK4-208ENST00000551706 MYH16Q9H6N6 1097 aa22.39■■□□□ 1.17
CDK4-208ENST00000551706 DDX21Q9NR30 783 aaKnown RBP eCLIP22.39■■□□□ 1.17
CDK4-208ENST00000551706 SBF1O95248 1867 aa22.39■■□□□ 1.17
CDK4-208ENST00000551706 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
CDK4-208ENST00000551706 GOLGA2Q08379 1002 aa22.38■■□□□ 1.17
CDK4-208ENST00000551706 NFIXQ14938 502 aa22.38■■□□□ 1.17
CDK4-208ENST00000551706 PDIA6Q15084 440 aa22.38■■□□□ 1.17
CDK4-208ENST00000551706 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
CDK4-208ENST00000551706 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
CDK4-208ENST00000551706 DBF4Q9UBU7 674 aaPredicted RBP22.38■■□□□ 1.17
CDK4-208ENST00000551706 FANCIQ9NVI1 1328 aa22.37■■□□□ 1.17
CDK4-208ENST00000551706 SCN7AQ01118 1682 aa22.37■■□□□ 1.17
CDK4-208ENST00000551706 ERVV-1B6SEH8 477 aa22.37■■□□□ 1.17
CDK4-208ENST00000551706 ZC3H4Q9UPT8 1303 aaKnown RBP22.36■■□□□ 1.17
CDK4-208ENST00000551706 POLRMTO00411 1230 aaKnown RBP22.36■■□□□ 1.17
CDK4-208ENST00000551706 ELL2O00472 640 aaPredicted RBP22.36■■□□□ 1.17
CDK4-208ENST00000551706 SLC34A2O95436 690 aa22.36■■□□□ 1.17
CDK4-208ENST00000551706 DDR1Q08345 913 aa22.36■■□□□ 1.17
CDK4-208ENST00000551706 LRP10Q7Z4F1 713 aa22.36■■□□□ 1.17
CDK4-208ENST00000551706 MAP3K15Q6ZN16 1313 aa22.35■■□□□ 1.17
CDK4-208ENST00000551706 VEGFAP15692 232 aaPredicted RBP22.35■■□□□ 1.17
CDK4-208ENST00000551706 TBC1D9BQ66K14 1250 aa22.35■■□□□ 1.17
CDK4-208ENST00000551706 CHPF2Q9P2E5 772 aa22.35■■□□□ 1.17
CDK4-208ENST00000551706 PROSER3Q2NL68 480 aa22.34■■□□□ 1.17
CDK4-208ENST00000551706 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
CDK4-208ENST00000551706 TTLL7Q6ZT98 887 aa22.34■■□□□ 1.17
CDK4-208ENST00000551706 SETDB2Q96T68 719 aa22.34■■□□□ 1.17
CDK4-208ENST00000551706 HYPKQ9NX55 129 aa22.34■■□□□ 1.17
CDK4-208ENST00000551706 ANXA1P04083 346 aa22.33■■□□□ 1.17
CDK4-208ENST00000551706 CHRNA5P30532 468 aa22.33■■□□□ 1.17
CDK4-208ENST00000551706 TWISTNBQ3B726 338 aaPredicted RBP22.33■■□□□ 1.17
CDK4-208ENST00000551706 BICDL1Q6ZP65 573 aa22.33■■□□□ 1.17
CDK4-208ENST00000551706 CARMIL3Q8ND23 1372 aa22.33■■□□□ 1.17
CDK4-208ENST00000551706 BCORQ6W2J9 1755 aa22.33■■□□□ 1.16
CDK4-208ENST00000551706 GLTPD2A6NH11 291 aa22.32■■□□□ 1.16
CDK4-208ENST00000551706 SERPINB2P05120 415 aa22.32■■□□□ 1.16
CDK4-208ENST00000551706 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
CDK4-208ENST00000551706 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
CDK4-208ENST00000551706 E9PSI1 815 aa22.31■■□□□ 1.16
CDK4-208ENST00000551706 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
CDK4-208ENST00000551706 XAGE3Q8WTP9 111 aa22.31■■□□□ 1.16
CDK4-208ENST00000551706 RASSF7Q02833 373 aa22.3■■□□□ 1.16
CDK4-208ENST00000551706 HLFQ16534 295 aa22.3■■□□□ 1.16
CDK4-208ENST00000551706 ZBTB3Q9H5J0 574 aa22.3■■□□□ 1.16
CDK4-208ENST00000551706 EXOSC9Q06265 439 aaKnown RBP22.29■■□□□ 1.16
CDK4-208ENST00000551706 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
CDK4-208ENST00000551706 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
CDK4-208ENST00000551706 NIP7Q9Y221 180 aaKnown RBP eCLIP22.29■■□□□ 1.16
CDK4-208ENST00000551706 LMNB1P20700 586 aa22.28■■□□□ 1.16
CDK4-208ENST00000551706 GIGYF2Q6Y7W6 1299 aaKnown RBP22.28■■□□□ 1.16
CDK4-208ENST00000551706 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
CDK4-208ENST00000551706 NPHP1O15259 732 aa22.26■■□□□ 1.15
CDK4-208ENST00000551706 NBPF5PQ86XG9 351 aaPredicted RBP22.26■■□□□ 1.15
CDK4-208ENST00000551706 CNBD1Q8NA66 436 aa22.26■■□□□ 1.15
CDK4-208ENST00000551706 VAMP4O75379 141 aa22.25■■□□□ 1.15
CDK4-208ENST00000551706 SLFN5Q08AF3 891 aa22.25■■□□□ 1.15
CDK4-208ENST00000551706 ANKRD13DQ6ZTN6 518 aa22.25■■□□□ 1.15
CDK4-208ENST00000551706 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
CDK4-208ENST00000551706 NRXN2Q9P2S2 1712 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms