RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ATP5J2-PTCD1G3V325 749 aa24.47■■□□□ 1.51
SSH1-209ENST00000551165 POLA2Q14181 598 aa24.47■■□□□ 1.51
SSH1-209ENST00000551165 SUCLG2Q96I99 432 aa24.47■■□□□ 1.51
SSH1-209ENST00000551165 ERBB4Q15303 1308 aa24.47■■□□□ 1.51
SSH1-209ENST00000551165 ARFGEF2Q9Y6D5 1785 aa24.46■■□□□ 1.51
SSH1-209ENST00000551165 NEXNQ0ZGT2 675 aa24.46■■□□□ 1.51
SSH1-209ENST00000551165 GCKRQ14397 625 aa24.46■■□□□ 1.51
SSH1-209ENST00000551165 PLBD2Q8NHP8 589 aa24.46■■□□□ 1.51
SSH1-209ENST00000551165 ZBTB47Q9UFB7 747 aaPredicted RBP24.46■■□□□ 1.51
SSH1-209ENST00000551165 GSPT1P15170 499 aaKnown RBP24.45■■□□□ 1.51
SSH1-209ENST00000551165 IBTKQ9P2D0 1353 aaPredicted RBP24.45■■□□□ 1.5
SSH1-209ENST00000551165 UTYO14607 1347 aa24.45■■□□□ 1.5
SSH1-209ENST00000551165 BMP2KLQ5H9B9 411 aa24.45■■□□□ 1.5
SSH1-209ENST00000551165 FNBP4Q8N3X1 1017 aaPredicted RBP24.45■■□□□ 1.5
SSH1-209ENST00000551165 VPS72Q15906 364 aa24.44■■□□□ 1.5
SSH1-209ENST00000551165 ZBTB3Q9H5J0 574 aa24.44■■□□□ 1.5
SSH1-209ENST00000551165 ZNF330Q9Y3S2 320 aaPredicted RBP24.44■■□□□ 1.5
SSH1-209ENST00000551165 VSIG10Q8N0Z9 540 aa24.43■■□□□ 1.5
SSH1-209ENST00000551165 IPO9Q96P70 1041 aaKnown RBP24.43■■□□□ 1.5
SSH1-209ENST00000551165 SURF6O75683 361 aaKnown RBP24.43■■□□□ 1.5
SSH1-209ENST00000551165 LRRCC1Q9C099 1032 aa24.43■■□□□ 1.5
SSH1-209ENST00000551165 BICC1Q9H694 974 aaKnown RBP24.43■■□□□ 1.5
SSH1-209ENST00000551165 SPATA31A6Q5VVP1 1343 aa24.42■■□□□ 1.5
SSH1-209ENST00000551165 EPHA10Q5JZY3 1008 aa24.42■■□□□ 1.5
SSH1-209ENST00000551165 USP21Q9UK80 565 aa24.42■■□□□ 1.5
SSH1-209ENST00000551165 KCNQ2O43526 872 aa24.4■■□□□ 1.5
SSH1-209ENST00000551165 MTX1Q13505 466 aa24.4■■□□□ 1.5
SSH1-209ENST00000551165 TSHZ3Q63HK5 1081 aa24.4■■□□□ 1.5
SSH1-209ENST00000551165 IL1RAPL2Q9NP60 686 aa24.4■■□□□ 1.5
SSH1-209ENST00000551165 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.4■■□□□ 1.5
SSH1-209ENST00000551165 AFDNP55196 1824 aaKnown RBP24.4■■□□□ 1.5
SSH1-209ENST00000551165 TTC22Q5TAA0 569 aa24.39■■□□□ 1.5
SSH1-209ENST00000551165 PA2G4Q9UQ80 394 aaKnown RBP24.39■■□□□ 1.5
SSH1-209ENST00000551165 NUP188Q5SRE5 1749 aa24.39■■□□□ 1.5
SSH1-209ENST00000551165 CYP19A1P11511 503 aaPredicted RBP24.39■■□□□ 1.49
SSH1-209ENST00000551165 TEX13AQ9BXU3 409 aaPredicted RBP24.38■■□□□ 1.49
SSH1-209ENST00000551165 STARD3NLO95772 234 aa24.38■■□□□ 1.49
SSH1-209ENST00000551165 UBE3BQ7Z3V4 1068 aa24.38■■□□□ 1.49
SSH1-209ENST00000551165 SALL3Q9BXA9 1300 aa24.37■■□□□ 1.49
SSH1-209ENST00000551165 A0A087WZG4 1122 aa24.37■■□□□ 1.49
SSH1-209ENST00000551165 MFAP1P55081 439 aaKnown RBP24.37■■□□□ 1.49
SSH1-209ENST00000551165 MYT1Q01538 1121 aa24.36■■□□□ 1.49
SSH1-209ENST00000551165 RTL5Q5HYW3 569 aaPredicted RBP24.36■■□□□ 1.49
SSH1-209ENST00000551165 PDE1AP54750 535 aa24.36■■□□□ 1.49
SSH1-209ENST00000551165 ZBTB1Q9Y2K1 713 aa24.36■■□□□ 1.49
SSH1-209ENST00000551165 RHPN1Q8TCX5 695 aa24.35■■□□□ 1.49
SSH1-209ENST00000551165 TJP1Q07157 1748 aa24.35■■□□□ 1.49
SSH1-209ENST00000551165 CASP7P55210 303 aa24.35■■□□□ 1.49
SSH1-209ENST00000551165 MEX3CQ5U5Q3 659 aaKnown RBP24.35■■□□□ 1.49
SSH1-209ENST00000551165 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
SSH1-209ENST00000551165 KLHDC4Q8TBB5 520 aa24.35■■□□□ 1.49
SSH1-209ENST00000551165 TBC1D9Q6ZT07 1266 aa24.34■■□□□ 1.49
SSH1-209ENST00000551165 ARXQ96QS3 562 aa24.34■■□□□ 1.49
SSH1-209ENST00000551165 FAM182BQ5T319 152 aa24.34■■□□□ 1.49
SSH1-209ENST00000551165 NUTM1Q86Y26 1132 aa24.34■■□□□ 1.49
SSH1-209ENST00000551165 NOP58Q9Y2X3 529 aaKnown RBP24.34■■□□□ 1.49
SSH1-209ENST00000551165 RAB11FIP3O75154 756 aa24.32■■□□□ 1.48
SSH1-209ENST00000551165 SDSP20132 328 aa24.32■■□□□ 1.48
SSH1-209ENST00000551165 HDAC5Q9UQL6 1122 aa24.32■■□□□ 1.48
SSH1-209ENST00000551165 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.32■■□□□ 1.48
SSH1-209ENST00000551165 TBC1D32Q96NH3 1257 aa24.31■■□□□ 1.48
SSH1-209ENST00000551165 OSBPL3Q9H4L5 887 aa24.31■■□□□ 1.48
SSH1-209ENST00000551165 MX1P20591 662 aa24.31■■□□□ 1.48
SSH1-209ENST00000551165 H7C1W4 665 aa24.3■■□□□ 1.48
SSH1-209ENST00000551165 CWC25Q9NXE8 425 aaPredicted RBP24.3■■□□□ 1.48
SSH1-209ENST00000551165 AFF2P51816 1311 aa24.3■■□□□ 1.48
SSH1-209ENST00000551165 OS9Q13438 667 aaPredicted RBP24.3■■□□□ 1.48
SSH1-209ENST00000551165 ITPK1Q13572 414 aa24.3■■□□□ 1.48
SSH1-209ENST00000551165 HLFQ16534 295 aa24.3■■□□□ 1.48
SSH1-209ENST00000551165 KIF1BPQ96EK5 621 aa24.3■■□□□ 1.48
SSH1-209ENST00000551165 LOC102724428A0A0B4J2F2 783 aa24.29■■□□□ 1.48
SSH1-209ENST00000551165 ATP6V1AP38606 617 aa24.29■■□□□ 1.48
SSH1-209ENST00000551165 SIK1P57059 783 aa24.29■■□□□ 1.48
SSH1-209ENST00000551165 SIL1Q9H173 461 aa24.29■■□□□ 1.48
SSH1-209ENST00000551165 SLC4A3P48751 1232 aa24.29■■□□□ 1.48
SSH1-209ENST00000551165 TCIRG1Q13488 830 aa24.28■■□□□ 1.48
SSH1-209ENST00000551165 ISCA1Q9BUE6 129 aa24.28■■□□□ 1.48
SSH1-209ENST00000551165 UPF2Q9HAU5 1272 aaKnown RBP24.28■■□□□ 1.48
SSH1-209ENST00000551165 PALLDQ8WX93 1383 aa24.28■■□□□ 1.48
SSH1-209ENST00000551165 KIF6Q6ZMV9 814 aa24.28■■□□□ 1.48
SSH1-209ENST00000551165 CDC45O75419 566 aa24.27■■□□□ 1.48
SSH1-209ENST00000551165 CCDC191Q8NCU4 936 aa24.27■■□□□ 1.48
SSH1-209ENST00000551165 SASH1O94885 1247 aa24.27■■□□□ 1.48
SSH1-209ENST00000551165 KCNQ4P56696 695 aa24.27■■□□□ 1.48
SSH1-209ENST00000551165 FOXO4P98177 505 aa24.27■■□□□ 1.48
SSH1-209ENST00000551165 INTS5Q6P9B9 1019 aaKnown RBP24.27■■□□□ 1.48
SSH1-209ENST00000551165 GJD4Q96KN9 370 aaPredicted RBP24.27■■□□□ 1.48
SSH1-209ENST00000551165 TBC1D2BQ9UPU7 963 aa24.27■■□□□ 1.48
SSH1-209ENST00000551165 MAP3K15Q6ZN16 1313 aa24.26■■□□□ 1.47
SSH1-209ENST00000551165 RFX5P48382 616 aaPredicted RBP24.26■■□□□ 1.47
SSH1-209ENST00000551165 RABL6Q3YEC7 729 aaPredicted RBP24.26■■□□□ 1.47
SSH1-209ENST00000551165 HSP90AB4PQ58FF6 505 aa24.26■■□□□ 1.47
SSH1-209ENST00000551165 STAP2Q9UGK3 403 aa24.26■■□□□ 1.47
SSH1-209ENST00000551165 C22orf23Q9BZE7 217 aa24.25■■□□□ 1.47
SSH1-209ENST00000551165 LMBR1LQ6UX01 489 aa24.25■■□□□ 1.47
SSH1-209ENST00000551165 THSD7AQ9UPZ6 1657 aa24.25■■□□□ 1.47
SSH1-209ENST00000551165 CRKLP46109 303 aaKnown RBP24.24■■□□□ 1.47
SSH1-209ENST00000551165 GPTP24298 496 aa24.23■■□□□ 1.47
SSH1-209ENST00000551165 GIGYF2Q6Y7W6 1299 aaKnown RBP24.23■■□□□ 1.47
SSH1-209ENST00000551165 COL15A1P39059 1388 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms