RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 GPR25O00155 361 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 CELA2BP08218 269 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-213ENST00000550629 CENPCQ03188 943 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 POU4F2Q12837 409 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 CFDP1Q9UEE9 299 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-213ENST00000550629 CDC42BPAQ5VT25 1732 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
SCAF11-213ENST00000550629 ARHGAP5Q13017 1502 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 FGD6Q6ZV73 1430 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 A6NJR5 290 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 H7C1W4 665 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 UCN2Q96RP3 112 aa8.75□□□□□ -1.01
SCAF11-213ENST00000550629 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
SCAF11-213ENST00000550629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.74□□□□□ -1.01
SCAF11-213ENST00000550629 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 SPATA31C2B4DYI2 1134 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 FOXK2Q01167 660 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 EML3Q32P44 896 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 DEPDC4Q8N2C3 294 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 DYRK1BQ9Y463 629 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 TCOF1Q13428 1488 aaKnown RBP8.74□□□□□ -1.01
SCAF11-213ENST00000550629 PPRC1Q5VV67 1664 aaKnown RBP8.74□□□□□ -1.01
SCAF11-213ENST00000550629 CDC42BPBQ9Y5S2 1711 aa8.74□□□□□ -1.01
SCAF11-213ENST00000550629 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
SCAF11-213ENST00000550629 SCNN1DP51172 638 aa8.73□□□□□ -1.01
SCAF11-213ENST00000550629 GDF10P55107 478 aa8.73□□□□□ -1.01
SCAF11-213ENST00000550629 NCOA4Q13772 614 aa8.73□□□□□ -1.01
SCAF11-213ENST00000550629 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
SCAF11-213ENST00000550629 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
SCAF11-213ENST00000550629 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
SCAF11-213ENST00000550629 GTPBP3Q969Y2 492 aaKnown RBP8.73□□□□□ -1.01
SCAF11-213ENST00000550629 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-213ENST00000550629 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-213ENST00000550629 AKNAQ7Z591 1439 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
SCAF11-213ENST00000550629 LZTS3O60299 673 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-213ENST00000550629 ADAM23O75077 832 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 DBN1Q16643 649 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 PODNQ7Z5L7 613 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
SCAF11-213ENST00000550629 GLMNQ92990 594 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 PCDHGA11Q9Y5H2 935 aa8.72□□□□□ -1.01
SCAF11-213ENST00000550629 ADGRL1O94910 1474 aa8.71□□□□□ -1.01
SCAF11-213ENST00000550629 CAMSAP2Q08AD1 1489 aa8.71□□□□□ -1.01
SCAF11-213ENST00000550629 ABCC1P33527 1531 aa8.71□□□□□ -1.01
SCAF11-213ENST00000550629 SAMD9LQ8IVG5 1584 aa8.71□□□□□ -1.02
SCAF11-213ENST00000550629 PHF20L1A8MW92 1017 aa8.71□□□□□ -1.02
SCAF11-213ENST00000550629 WASLO00401 505 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-213ENST00000550629 INHAP05111 366 aa8.71□□□□□ -1.02
SCAF11-213ENST00000550629 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
SCAF11-213ENST00000550629 NEDD1Q8NHV4 660 aa8.71□□□□□ -1.02
SCAF11-213ENST00000550629 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
SCAF11-213ENST00000550629 PTPN23Q9H3S7 1636 aa8.71□□□□□ -1.02
SCAF11-213ENST00000550629 ARHGEF5Q12774 1597 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 ATP9BO43861 1147 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 BCRP11274 1271 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 GTF2IP78347 998 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 TLR1Q15399 786 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
SCAF11-213ENST00000550629 PHKA2P46019 1235 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
SCAF11-213ENST00000550629 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 POGZQ7Z3K3 1410 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 SCAPERQ9BY12 1400 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 DENND4BO75064 1496 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-213ENST00000550629 ZNF518AQ6AHZ1 1483 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 MBD5Q9P267 1494 aa8.69□□□□□ -1.02
SCAF11-213ENST00000550629 USP17L3A6NCW0 530 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 USP17L4A6NCW7 530 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 MX2P20592 715 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-213ENST00000550629 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 USP17L1Q7RTZ2 530 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
SCAF11-213ENST00000550629 ZNF777Q9ULD5 760 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-213ENST00000550629 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-213ENST00000550629 CCDC141Q6ZP82 1450 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 SYCP2Q9BX26 1530 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 ARHGEF12Q9NZN5 1544 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 TSPOAP1O95153 1857 aa8.68□□□□□ -1.02
SCAF11-213ENST00000550629 SMTNP53814 917 aa8.67□□□□□ -1.02
SCAF11-213ENST00000550629 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
SCAF11-213ENST00000550629 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
SCAF11-213ENST00000550629 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
SCAF11-213ENST00000550629 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
SCAF11-213ENST00000550629 SHANK2Q9UPX8 1470 aa8.67□□□□□ -1.02
SCAF11-213ENST00000550629 DNMT1P26358 1616 aaKnown RBP8.66□□□□□ -1.02
SCAF11-213ENST00000550629 KDM5CP41229 1560 aa8.66□□□□□ -1.02
SCAF11-213ENST00000550629 ZMYM4Q5VZL5 1548 aa8.66□□□□□ -1.02
SCAF11-213ENST00000550629 MAGI2Q86UL8 1455 aa8.66□□□□□ -1.02
SCAF11-213ENST00000550629 F11P03951 625 aa8.66□□□□□ -1.02
SCAF11-213ENST00000550629 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms