RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 NFKBIEO00221 500 aa26.3■■□□□ 1.8
SLC38A1-208ENST00000550173 C21orf2O43822 256 aa26.3■■□□□ 1.8
SLC38A1-208ENST00000550173 NBPF5PQ86XG9 351 aaPredicted RBP26.3■■□□□ 1.8
SLC38A1-208ENST00000550173 RBM46Q8TBY0 533 aaKnown RBP26.3■■□□□ 1.8
SLC38A1-208ENST00000550173 CEP350Q5VT06 3117 aa26.3■■□□□ 1.8
SLC38A1-208ENST00000550173 ZC3H4Q9UPT8 1303 aaKnown RBP26.3■■□□□ 1.8
SLC38A1-208ENST00000550173 APLP1P51693 650 aa26.28■■□□□ 1.8
SLC38A1-208ENST00000550173 CNKSR1Q969H4 720 aa26.28■■□□□ 1.8
SLC38A1-208ENST00000550173 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
SLC38A1-208ENST00000550173 RALBP1Q15311 655 aa26.27■■□□□ 1.8
SLC38A1-208ENST00000550173 STYK1Q6J9G0 422 aa26.27■■□□□ 1.8
SLC38A1-208ENST00000550173 NIP7Q9Y221 180 aaKnown RBP eCLIP26.27■■□□□ 1.8
SLC38A1-208ENST00000550173 TNRC6CQ9HCJ0 1690 aaKnown RBP26.27■■□□□ 1.8
SLC38A1-208ENST00000550173 LAMB4A4D0S4 1761 aa26.27■■□□□ 1.8
SLC38A1-208ENST00000550173 KDM3BQ7LBC6 1761 aa26.27■■□□□ 1.8
SLC38A1-208ENST00000550173 SRGNP10124 158 aa26.26■■□□□ 1.79
SLC38A1-208ENST00000550173 MASTLQ96GX5 879 aa26.26■■□□□ 1.79
SLC38A1-208ENST00000550173 GLTPD2A6NH11 291 aa26.25■■□□□ 1.79
SLC38A1-208ENST00000550173 RGL2O15211 777 aa26.25■■□□□ 1.79
SLC38A1-208ENST00000550173 EIF4A1P60842 406 aaKnown RBP26.25■■□□□ 1.79
SLC38A1-208ENST00000550173 NGEFQ8N5V2 710 aa26.25■■□□□ 1.79
SLC38A1-208ENST00000550173 CACNA1SQ13698 1873 aa26.24■■□□□ 1.79
SLC38A1-208ENST00000550173 FAM177BA6PVY3 158 aa26.24■■□□□ 1.79
SLC38A1-208ENST00000550173 HLFQ16534 295 aa26.24■■□□□ 1.79
SLC38A1-208ENST00000550173 TPTE2Q6XPS3 522 aa26.24■■□□□ 1.79
SLC38A1-208ENST00000550173 SLX4Q8IY92 1834 aa26.23■■□□□ 1.79
SLC38A1-208ENST00000550173 TIAM2Q8IVF5 1701 aa26.23■■□□□ 1.79
SLC38A1-208ENST00000550173 PRPF40BQ6NWY9 871 aaKnown RBP26.23■■□□□ 1.79
SLC38A1-208ENST00000550173 RRP7AQ9Y3A4 280 aaKnown RBP26.23■■□□□ 1.79
SLC38A1-208ENST00000550173 FER1L6Q2WGJ9 1857 aa26.23■■□□□ 1.79
SLC38A1-208ENST00000550173 FSTL1Q12841 308 aa26.22■■□□□ 1.79
SLC38A1-208ENST00000550173 DDX10Q13206 875 aaKnown RBP26.22■■□□□ 1.79
SLC38A1-208ENST00000550173 SOGA3Q5TF21 947 aa26.2■■□□□ 1.78
SLC38A1-208ENST00000550173 TAOK3Q9H2K8 898 aa26.2■■□□□ 1.78
SLC38A1-208ENST00000550173 LTBP3Q9NS15 1303 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 MYL6BP14649 208 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 VEGFAP15692 232 aaPredicted RBP26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 NPR1P16066 1061 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 GTF2E1P29083 439 aaPredicted RBP26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 RIPK4P57078 832 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 ERFEQ4G0M1 354 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 DPY19L2Q6NUT2 758 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 ARFGEF2Q9Y6D5 1785 aa26.19■■□□□ 1.78
SLC38A1-208ENST00000550173 DICER1Q9UPY3 1922 aaKnown RBP26.18■■□□□ 1.78
SLC38A1-208ENST00000550173 TSPYL4Q9UJ04 414 aa26.18■■□□□ 1.78
SLC38A1-208ENST00000550173 MAP3K15Q6ZN16 1313 aa26.17■■□□□ 1.78
SLC38A1-208ENST00000550173 KLRG2A4D1S0 409 aaPredicted RBP26.17■■□□□ 1.78
SLC38A1-208ENST00000550173 ERVV-1B6SEH8 477 aa26.17■■□□□ 1.78
SLC38A1-208ENST00000550173 KIF6Q6ZMV9 814 aa26.17■■□□□ 1.78
SLC38A1-208ENST00000550173 TTLL7Q6ZT98 887 aa26.17■■□□□ 1.78
SLC38A1-208ENST00000550173 SMC1BQ8NDV3 1235 aa26.17■■□□□ 1.78
SLC38A1-208ENST00000550173 NUP98P52948 1817 aa26.16■■□□□ 1.78
SLC38A1-208ENST00000550173 MYBBP1AQ9BQG0 1328 aaKnown RBP26.15■■□□□ 1.78
SLC38A1-208ENST00000550173 TMPOP42166 694 aaKnown RBP26.15■■□□□ 1.78
SLC38A1-208ENST00000550173 WDR90Q96KV7 1748 aa26.14■■□□□ 1.78
SLC38A1-208ENST00000550173 CCDC93Q567U6 631 aa26.14■■□□□ 1.78
SLC38A1-208ENST00000550173 DNAJC5GQ8N7S2 189 aa26.14■■□□□ 1.78
SLC38A1-208ENST00000550173 C7orf43Q8WVR3 580 aa26.14■■□□□ 1.78
SLC38A1-208ENST00000550173 NYXQ9GZU5 481 aa26.14■■□□□ 1.78
SLC38A1-208ENST00000550173 ZBTB3Q9H5J0 574 aa26.14■■□□□ 1.78
SLC38A1-208ENST00000550173 LMOD3Q0VAK6 560 aa26.13■■□□□ 1.77
SLC38A1-208ENST00000550173 ERBB4Q15303 1308 aa26.13■■□□□ 1.77
SLC38A1-208ENST00000550173 HTRA3P83110 453 aa26.12■■□□□ 1.77
SLC38A1-208ENST00000550173 POTECB2RU33 542 aa26.11■■□□□ 1.77
SLC38A1-208ENST00000550173 EIF2S2P20042 333 aaKnown RBP26.11■■□□□ 1.77
SLC38A1-208ENST00000550173 GPTP24298 496 aa26.11■■□□□ 1.77
SLC38A1-208ENST00000550173 NUTM1Q86Y26 1132 aa26.11■■□□□ 1.77
SLC38A1-208ENST00000550173 ALDH1B1P30837 517 aa26.1■■□□□ 1.77
SLC38A1-208ENST00000550173 NEUROD2Q15784 382 aa26.1■■□□□ 1.77
SLC38A1-208ENST00000550173 CCDC146Q8IYE0 955 aa26.1■■□□□ 1.77
SLC38A1-208ENST00000550173 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
SLC38A1-208ENST00000550173 ABCC12Q96J65 1359 aa26.08■■□□□ 1.77
SLC38A1-208ENST00000550173 FKBP4Q02790 459 aaKnown RBP eCLIP26.08■■□□□ 1.77
SLC38A1-208ENST00000550173 WDR43Q15061 677 aaKnown RBP eCLIP26.08■■□□□ 1.77
SLC38A1-208ENST00000550173 OLFM4Q6UX06 510 aa26.08■■□□□ 1.77
SLC38A1-208ENST00000550173 GIGYF2Q6Y7W6 1299 aaKnown RBP26.08■■□□□ 1.77
SLC38A1-208ENST00000550173 UBN2Q6ZU65 1347 aa26.08■■□□□ 1.77
SLC38A1-208ENST00000550173 DDNO94850 711 aaPredicted RBP26.07■■□□□ 1.76
SLC38A1-208ENST00000550173 SUSD4Q5VX71 490 aa26.07■■□□□ 1.76
SLC38A1-208ENST00000550173 CRY2Q49AN0 593 aa26.06■■□□□ 1.76
SLC38A1-208ENST00000550173 ZNF34Q8IZ26 560 aa26.06■■□□□ 1.76
SLC38A1-208ENST00000550173 RTKN2Q8IZC4 609 aa26.06■■□□□ 1.76
SLC38A1-208ENST00000550173 PDIA6Q15084 440 aa26.05■■□□□ 1.76
SLC38A1-208ENST00000550173 RUNDC1Q96C34 613 aa26.05■■□□□ 1.76
SLC38A1-208ENST00000550173 ZNF277Q9NRM2 450 aaPredicted RBP26.05■■□□□ 1.76
SLC38A1-208ENST00000550173 IBTKQ9P2D0 1353 aaPredicted RBP26.05■■□□□ 1.76
SLC38A1-208ENST00000550173 ANXA1P04083 346 aa26.04■■□□□ 1.76
SLC38A1-208ENST00000550173 RPGRQ92834 1020 aaKnown RBP26.04■■□□□ 1.76
SLC38A1-208ENST00000550173 KLRG1Q96E93 195 aa26.04■■□□□ 1.76
SLC38A1-208ENST00000550173 PROSER3Q2NL68 480 aa26.03■■□□□ 1.76
SLC38A1-208ENST00000550173 LRP10Q7Z4F1 713 aa26.03■■□□□ 1.76
SLC38A1-208ENST00000550173 PPP1R42Q7Z4L9 355 aa26.03■■□□□ 1.76
SLC38A1-208ENST00000550173 NECTIN2Q92692 538 aa26.03■■□□□ 1.76
SLC38A1-208ENST00000550173 LAS1LQ9Y4W2 734 aaKnown RBP26.03■■□□□ 1.76
SLC38A1-208ENST00000550173 NTSR2O95665 410 aa26.02■■□□□ 1.76
SLC38A1-208ENST00000550173 PARP10Q53GL7 1025 aa26.02■■□□□ 1.76
SLC38A1-208ENST00000550173 RIC1Q4ADV7 1423 aa26.02■■□□□ 1.76
SLC38A1-208ENST00000550173 SYNE4Q8N205 404 aa26.01■■□□□ 1.75
SLC38A1-208ENST00000550173 ADAMTS8Q9UP79 889 aa26.01■■□□□ 1.75
SLC38A1-208ENST00000550173 CHL1O00533 1208 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms