RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 HOXC9P31274 260 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 AK2P54819 239 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 NLRP6P59044 892 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 FAM193AP78312 1265 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 AMOTL2Q9Y2J4 779 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
ERBB3-214ENST00000550070 PHF14O94880 888 aa12.38□□□□□ -0.43
ERBB3-214ENST00000550070 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
ERBB3-214ENST00000550070 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
ERBB3-214ENST00000550070 SRGAP3O43295 1099 aa12.38□□□□□ -0.43
ERBB3-214ENST00000550070 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
ERBB3-214ENST00000550070 HSPA2P54652 639 aa12.38□□□□□ -0.43
ERBB3-214ENST00000550070 RUFY3Q7L099 469 aa12.38□□□□□ -0.43
ERBB3-214ENST00000550070 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
ERBB3-214ENST00000550070 MPNDQ8N594 471 aa12.37□□□□□ -0.43
ERBB3-214ENST00000550070 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
ERBB3-214ENST00000550070 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
ERBB3-214ENST00000550070 KDM4FA0A1W2PPD8 638 aa12.37□□□□□ -0.43
ERBB3-214ENST00000550070 CPA1P15085 419 aa12.37□□□□□ -0.43
ERBB3-214ENST00000550070 CWC27Q6UX04 472 aaKnown RBP12.37□□□□□ -0.43
ERBB3-214ENST00000550070 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
ERBB3-214ENST00000550070 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
ERBB3-214ENST00000550070 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
ERBB3-214ENST00000550070 SYT1P21579 422 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 STX6O43752 255 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 LARGE1O95461 756 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 UVSSAQ2YD98 709 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 USHBP1Q8N6Y0 703 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 USP25Q9UHP3 1055 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
ERBB3-214ENST00000550070 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
ERBB3-214ENST00000550070 DTNBO60941 627 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 SASS6Q6UVJ0 657 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 ZNF830Q96NB3 372 aaPredicted RBP12.35□□□□□ -0.43
ERBB3-214ENST00000550070 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 BEND3Q5T5X7 828 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 PRDM4Q9UKN5 801 aa12.35□□□□□ -0.43
ERBB3-214ENST00000550070 F13A1P00488 732 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
ERBB3-214ENST00000550070 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 DYNC1I1O14576 645 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
ERBB3-214ENST00000550070 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
ERBB3-214ENST00000550070 UBE2HP62256 183 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
ERBB3-214ENST00000550070 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 CHPF2Q9P2E5 772 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
ERBB3-214ENST00000550070 ADCY5O95622 1261 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
ERBB3-214ENST00000550070 PTH1RQ03431 593 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 HYPKQ9NX55 129 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 FIBPO43427 364 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 ANXA1P04083 346 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 ADCK5Q3MIX3 580 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
ERBB3-214ENST00000550070 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
ERBB3-214ENST00000550070 KCNQ3O43525 872 aa12.32□□□□□ -0.44
ERBB3-214ENST00000550070 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
ERBB3-214ENST00000550070 CCDC83Q8IWF9 413 aa12.32□□□□□ -0.44
ERBB3-214ENST00000550070 CEMIPQ8WUJ3 1361 aa12.32□□□□□ -0.44
ERBB3-214ENST00000550070 GJB2P29033 226 aa12.32□□□□□ -0.44
ERBB3-214ENST00000550070 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
ERBB3-214ENST00000550070 TTC12Q9H892 705 aaPredicted RBP12.32□□□□□ -0.44
ERBB3-214ENST00000550070 EID1Q9Y6B2 187 aa12.32□□□□□ -0.44
ERBB3-214ENST00000550070 ABTB2Q8N961 1025 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
ERBB3-214ENST00000550070 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
ERBB3-214ENST00000550070 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
ERBB3-214ENST00000550070 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
ERBB3-214ENST00000550070 MTMR6Q9Y217 621 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 HSP90AB4PQ58FF6 505 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 PRPF40BQ6NWY9 871 aaKnown RBP12.31□□□□□ -0.44
ERBB3-214ENST00000550070 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 PDRG1Q9NUG6 133 aa12.31□□□□□ -0.44
ERBB3-214ENST00000550070 ADCY9O60503 1353 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 ADAMTSL3P82987 1691 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 KDM4AO75164 1064 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■□□□□ 11.3
ERBB3-214ENST00000550070 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 C17orf53Q8N3J3 647 aaPredicted RBP12.3□□□□□ -0.44
ERBB3-214ENST00000550070 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
ERBB3-214ENST00000550070 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
ERBB3-214ENST00000550070 AP5Z1O43299 807 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms