RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBE2N-203ENST00000549490 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
UBE2N-203ENST00000549490 CAPNS2Q96L46 248 aa12.21□□□□□ -0.45
UBE2N-203ENST00000549490 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
UBE2N-203ENST00000549490 DDX21Q9NR30 783 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBE2N-203ENST00000549490 ANKRD31Q8N7Z5 1873 aa12.21□□□□□ -0.46
UBE2N-203ENST00000549490 MRC1P22897 1456 aa12.21□□□□□ -0.46
UBE2N-203ENST00000549490 COL11A2P13942 1736 aaPredicted RBP12.2□□□□□ -0.46
UBE2N-203ENST00000549490 NPHP1O15259 732 aa12.2□□□□□ -0.46
UBE2N-203ENST00000549490 ST5P78524 1137 aa12.2□□□□□ -0.46
UBE2N-203ENST00000549490 FMR1Q06787 632 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBE2N-203ENST00000549490 GPR101Q96P66 508 aaPredicted RBP12.2□□□□□ -0.46
UBE2N-203ENST00000549490 POLR3GLQ9BT43 218 aa12.2□□□□□ -0.46
UBE2N-203ENST00000549490 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
UBE2N-203ENST00000549490 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
UBE2N-203ENST00000549490 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
UBE2N-203ENST00000549490 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 FZD9O00144 591 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 ECE1P42892 770 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 CYP4F22Q6NT55 531 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 MORC1Q86VD1 984 aa12.19□□□□□ -0.46
UBE2N-203ENST00000549490 SCN4AP35499 1836 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 NPR1P16066 1061 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 IL6STP40189 918 aaPredicted RBP12.18□□□□□ -0.46
UBE2N-203ENST00000549490 GRM1Q13255 1194 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
UBE2N-203ENST00000549490 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
UBE2N-203ENST00000549490 TTC5Q8N0Z6 440 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
UBE2N-203ENST00000549490 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 MCOLN1Q9GZU1 580 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 PANK3Q9H999 370 aa12.18□□□□□ -0.46
UBE2N-203ENST00000549490 A1BGP04217 495 aa12.17□□□□□ -0.46
UBE2N-203ENST00000549490 CST9Q5W186 159 aa12.17□□□□□ -0.46
UBE2N-203ENST00000549490 GPC2Q8N158 579 aa12.17□□□□□ -0.46
UBE2N-203ENST00000549490 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
UBE2N-203ENST00000549490 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
UBE2N-203ENST00000549490 AOC2O75106 756 aa12.16□□□□□ -0.46
UBE2N-203ENST00000549490 HMOX1P09601 288 aa12.16□□□□□ -0.46
UBE2N-203ENST00000549490 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
UBE2N-203ENST00000549490 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
UBE2N-203ENST00000549490 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
UBE2N-203ENST00000549490 HEG1Q9ULI3 1381 aa12.16□□□□□ -0.46
UBE2N-203ENST00000549490 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
UBE2N-203ENST00000549490 TRAF5O00463 557 aa12.15□□□□□ -0.46
UBE2N-203ENST00000549490 MAP2K2P36507 400 aa12.15□□□□□ -0.46
UBE2N-203ENST00000549490 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
UBE2N-203ENST00000549490 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
UBE2N-203ENST00000549490 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
UBE2N-203ENST00000549490 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
UBE2N-203ENST00000549490 NPM2Q86SE8 214 aaKnown RBP12.14□□□□□ -0.47
UBE2N-203ENST00000549490 GJA3Q9Y6H8 435 aa12.14□□□□□ -0.47
UBE2N-203ENST00000549490 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
UBE2N-203ENST00000549490 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
UBE2N-203ENST00000549490 CA12O43570 354 aa12.13□□□□□ -0.47
UBE2N-203ENST00000549490 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
UBE2N-203ENST00000549490 EPS15P42566 896 aa12.13□□□□□ -0.47
UBE2N-203ENST00000549490 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
UBE2N-203ENST00000549490 JDP2Q8WYK2 163 aa12.13□□□□□ -0.47
UBE2N-203ENST00000549490 SCNN1DP51172 638 aa12.12□□□□□ -0.47
UBE2N-203ENST00000549490 EIF6P56537 245 aaKnown RBP12.12□□□□□ -0.47
UBE2N-203ENST00000549490 TEFQ10587 303 aa12.12□□□□□ -0.47
UBE2N-203ENST00000549490 DGKZQ13574 1117 aa12.12□□□□□ -0.47
UBE2N-203ENST00000549490 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
UBE2N-203ENST00000549490 PSMD1Q99460 953 aa12.12□□□□□ -0.47
UBE2N-203ENST00000549490 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
UBE2N-203ENST00000549490 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
UBE2N-203ENST00000549490 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
UBE2N-203ENST00000549490 USP50Q70EL3 339 aaPredicted RBP12.11□□□□□ -0.47
UBE2N-203ENST00000549490 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
UBE2N-203ENST00000549490 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
UBE2N-203ENST00000549490 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
UBE2N-203ENST00000549490 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
UBE2N-203ENST00000549490 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
UBE2N-203ENST00000549490 KCNQ3O43525 872 aa12.1□□□□□ -0.47
UBE2N-203ENST00000549490 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
UBE2N-203ENST00000549490 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
UBE2N-203ENST00000549490 LTBP1Q14766 1721 aa12.1□□□□□ -0.47
UBE2N-203ENST00000549490 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
UBE2N-203ENST00000549490 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
UBE2N-203ENST00000549490 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
UBE2N-203ENST00000549490 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBE2N-203ENST00000549490 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
UBE2N-203ENST00000549490 COL4A5P29400 1685 aa12.09□□□□□ -0.47
UBE2N-203ENST00000549490 GNAT3A8MTJ3 354 aa12.08□□□□□ -0.48
UBE2N-203ENST00000549490 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
UBE2N-203ENST00000549490 LARGE2Q8N3Y3 721 aa12.08□□□□□ -0.48
UBE2N-203ENST00000549490 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
UBE2N-203ENST00000549490 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
UBE2N-203ENST00000549490 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
UBE2N-203ENST00000549490 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
UBE2N-203ENST00000549490 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
UBE2N-203ENST00000549490 CC2D2BQ6DHV5 1058 aa12.07□□□□□ -0.48
UBE2N-203ENST00000549490 GLIS2Q9BZE0 524 aaPredicted RBP12.07□□□□□ -0.48
UBE2N-203ENST00000549490 ADARB2Q9NS39 739 aaKnown RBP12.07□□□□□ -0.48
UBE2N-203ENST00000549490 BTBD11A6QL63 1104 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms