RNA–Protein interactions for RNA: ENST00000549282.5

ERBB3-209, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-209ENST00000549282 TAF1DQ9H5J8 278 aaPredicted RBP19.53■□□□□ 0.72
ERBB3-209ENST00000549282 VEGFBP49765 207 aa19.52■□□□□ 0.72
ERBB3-209ENST00000549282 C7orf43Q8WVR3 580 aa19.52■□□□□ 0.72
ERBB3-209ENST00000549282 L3MBTL3Q96JM7 780 aaPredicted RBP19.52■□□□□ 0.72
ERBB3-209ENST00000549282 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
ERBB3-209ENST00000549282 GNAT3A8MTJ3 354 aa19.51■□□□□ 0.71
ERBB3-209ENST00000549282 ITGBL1O95965 494 aaPredicted RBP19.51■□□□□ 0.71
ERBB3-209ENST00000549282 FMNL2Q96PY5 1086 aa19.51■□□□□ 0.71
ERBB3-209ENST00000549282 CACNA1SQ13698 1873 aa19.51■□□□□ 0.71
ERBB3-209ENST00000549282 SCN7AQ01118 1682 aa19.5■□□□□ 0.71
ERBB3-209ENST00000549282 TMEM88BA6NKF7 163 aa19.5■□□□□ 0.71
ERBB3-209ENST00000549282 CTCFP49711 727 aaPredicted RBP19.5■□□□□ 0.71
ERBB3-209ENST00000549282 AIDAQ96BJ3 306 aa19.5■□□□□ 0.71
ERBB3-209ENST00000549282 SCN4AP35499 1836 aa19.5■□□□□ 0.71
ERBB3-209ENST00000549282 DZIP3Q86Y13 1208 aaKnown RBP19.49■□□□□ 0.71
ERBB3-209ENST00000549282 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
ERBB3-209ENST00000549282 CCDC93Q567U6 631 aa19.48■□□□□ 0.71
ERBB3-209ENST00000549282 EAPPQ56P03 285 aaPredicted RBP19.48■□□□□ 0.71
ERBB3-209ENST00000549282 GAS2L2Q8NHY3 880 aa19.48■□□□□ 0.71
ERBB3-209ENST00000549282 WBP1LQ9NX94 342 aa19.48■□□□□ 0.71
ERBB3-209ENST00000549282 CLEC11AQ9Y240 323 aa19.48■□□□□ 0.71
ERBB3-209ENST00000549282 KCNQ3O43525 872 aa19.47■□□□□ 0.71
ERBB3-209ENST00000549282 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
ERBB3-209ENST00000549282 HACL1Q9UJ83 578 aa19.47■□□□□ 0.71
ERBB3-209ENST00000549282 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
ERBB3-209ENST00000549282 U2SURPO15042 1029 aaKnown RBP19.46■□□□□ 0.71
ERBB3-209ENST00000549282 PER1O15534 1290 aaPredicted RBP19.46■□□□□ 0.71
ERBB3-209ENST00000549282 NPR1P16066 1061 aa19.46■□□□□ 0.71
ERBB3-209ENST00000549282 LBX1P52954 281 aa19.46■□□□□ 0.71
ERBB3-209ENST00000549282 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
ERBB3-209ENST00000549282 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
ERBB3-209ENST00000549282 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
ERBB3-209ENST00000549282 ZNF277Q9NRM2 450 aaPredicted RBP19.46■□□□□ 0.71
ERBB3-209ENST00000549282 ARFGEF2Q9Y6D5 1785 aa19.46■□□□□ 0.71
ERBB3-209ENST00000549282 SIPA1L3O60292 1781 aaPredicted RBP19.45■□□□□ 0.7
ERBB3-209ENST00000549282 KLRG2A4D1S0 409 aaPredicted RBP19.45■□□□□ 0.7
ERBB3-209ENST00000549282 BTBD11A6QL63 1104 aa19.45■□□□□ 0.7
ERBB3-209ENST00000549282 PIP4K2AP48426 406 aaPredicted RBP19.45■□□□□ 0.7
ERBB3-209ENST00000549282 ZNF541Q9H0D2 1346 aa19.45■□□□□ 0.7
ERBB3-209ENST00000549282 EPHX2P34913 555 aa19.44■□□□□ 0.7
ERBB3-209ENST00000549282 DEFB115Q30KQ5 88 aa19.44■□□□□ 0.7
ERBB3-209ENST00000549282 OLFM4Q6UX06 510 aa19.44■□□□□ 0.7
ERBB3-209ENST00000549282 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
ERBB3-209ENST00000549282 TPTE2Q6XPS3 522 aa19.43■□□□□ 0.7
ERBB3-209ENST00000549282 PNMA8AQ86V59 439 aaPredicted RBP19.43■□□□□ 0.7
ERBB3-209ENST00000549282 RTKN2Q8IZC4 609 aa19.43■□□□□ 0.7
ERBB3-209ENST00000549282 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
ERBB3-209ENST00000549282 RASSF10A6NK89 507 aa19.42■□□□□ 0.7
ERBB3-209ENST00000549282 MAP1SQ66K74 1059 aaPredicted RBP19.42■□□□□ 0.7
ERBB3-209ENST00000549282 ZNF652Q9Y2D9 606 aa19.42■□□□□ 0.7
ERBB3-209ENST00000549282 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
ERBB3-209ENST00000549282 FZD9O00144 591 aa19.41■□□□□ 0.7
ERBB3-209ENST00000549282 SYNE4Q8N205 404 aa19.41■□□□□ 0.7
ERBB3-209ENST00000549282 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
ERBB3-209ENST00000549282 KIF7Q2M1P5 1343 aa19.41■□□□□ 0.7
ERBB3-209ENST00000549282 BCORQ6W2J9 1755 aa19.41■□□□□ 0.7
ERBB3-209ENST00000549282 HSPA8P11142 646 aaKnown RBP19.4■□□□□ 0.7
ERBB3-209ENST00000549282 ALDH1B1P30837 517 aa19.4■□□□□ 0.7
ERBB3-209ENST00000549282 IARSP41252 1262 aaKnown RBP19.4■□□□□ 0.7
ERBB3-209ENST00000549282 NIP7Q9Y221 180 aaKnown RBP eCLIP19.4■□□□□ 0.7
ERBB3-209ENST00000549282 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
ERBB3-209ENST00000549282 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
ERBB3-209ENST00000549282 SNRPA1P09661 255 aaKnown RBP19.39■□□□□ 0.69
ERBB3-209ENST00000549282 MAP2K1Q02750 393 aaPredicted RBP19.39■□□□□ 0.69
ERBB3-209ENST00000549282 WDR33Q9C0J8 1336 aaKnown RBP19.39■□□□□ 0.69
ERBB3-209ENST00000549282 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.69
ERBB3-209ENST00000549282 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
ERBB3-209ENST00000549282 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
ERBB3-209ENST00000549282 GPC2Q8N158 579 aa19.38■□□□□ 0.69
ERBB3-209ENST00000549282 ABHD8Q96I13 439 aa19.38■□□□□ 0.69
ERBB3-209ENST00000549282 NBPF26B4DH59 902 aa19.37■□□□□ 0.69
ERBB3-209ENST00000549282 NBPF10Q6P3W6 841 aaKnown RBP19.37■□□□□ 0.69
ERBB3-209ENST00000549282 NBPF15Q8N660 670 aa19.37■□□□□ 0.69
ERBB3-209ENST00000549282 ABT1Q9ULW3 272 aaKnown RBP19.37■□□□□ 0.69
ERBB3-209ENST00000549282 RGL2O15211 777 aa19.36■□□□□ 0.69
ERBB3-209ENST00000549282 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
ERBB3-209ENST00000549282 JDP2Q8WYK2 163 aa19.36■□□□□ 0.69
ERBB3-209ENST00000549282 GTF2E1P29083 439 aaPredicted RBP19.35■□□□□ 0.69
ERBB3-209ENST00000549282 HLFQ16534 295 aa19.35■□□□□ 0.69
ERBB3-209ENST00000549282 PSMD1Q99460 953 aa19.35■□□□□ 0.69
ERBB3-209ENST00000549282 DDX21Q9NR30 783 aaKnown RBP eCLIP19.35■□□□□ 0.69
ERBB3-209ENST00000549282 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
ERBB3-209ENST00000549282 GJA3Q9Y6H8 435 aa19.34■□□□□ 0.69
ERBB3-209ENST00000549282 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
ERBB3-209ENST00000549282 MCM10Q7L590 875 aa19.33■□□□□ 0.68
ERBB3-209ENST00000549282 SLC34A2O95436 690 aa19.32■□□□□ 0.68
ERBB3-209ENST00000549282 FMR1Q06787 632 aaKnown RBP eCLIP19.32■□□□□ 0.68
ERBB3-209ENST00000549282 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
ERBB3-209ENST00000549282 RTF1Q92541 710 aaKnown RBP19.32■□□□□ 0.68
ERBB3-209ENST00000549282 LMOD1P29536 600 aaPredicted RBP19.31■□□□□ 0.68
ERBB3-209ENST00000549282 EPS15P42566 896 aa19.31■□□□□ 0.68
ERBB3-209ENST00000549282 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
ERBB3-209ENST00000549282 CC2D2BQ6DHV5 1058 aa19.31■□□□□ 0.68
ERBB3-209ENST00000549282 NPC1L1Q9UHC9 1359 aa19.31■□□□□ 0.68
ERBB3-209ENST00000549282 PAXIP1Q6ZW49 1069 aaPredicted RBP19.3■□□□□ 0.68
ERBB3-209ENST00000549282 CAPNS2Q96L46 248 aa19.3■□□□□ 0.68
ERBB3-209ENST00000549282 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
ERBB3-209ENST00000549282 SNED1Q8TER0 1413 aa19.3■□□□□ 0.68
ERBB3-209ENST00000549282 ECE1P42892 770 aa19.29■□□□□ 0.68
ERBB3-209ENST00000549282 DCTN1Q14203 1278 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms