RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
DEPDC4-207ENST00000549249 ZNF790Q6PG37 636 aa10.39□□□□□ -0.75
DEPDC4-207ENST00000549249 BCL9O00512 1426 aa10.39□□□□□ -0.75
DEPDC4-207ENST00000549249 NHSQ6T4R5 1651 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 PRAMEF22A3QJZ6 481 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 SPNS2Q8IVW8 549 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 PIGBQ92521 554 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 ZNF496Q96IT1 587 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 N4BP2Q86UW6 1770 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 KIF16BQ96L93 1317 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 A0A0G2JS52 829 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 HOXB7P09629 217 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 RLBP1P12271 317 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 MYT1Q01538 1121 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 TJP1Q07157 1748 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 CRBNQ96SW2 442 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 TMOD3Q9NYL9 352 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 NOB1Q9ULX3 412 aaKnown RBP10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 BTAF1O14981 1849 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 TRIM27P14373 513 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 PANK1Q8TE04 598 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 CICQ96RK0 1608 aaPredicted RBP10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 PRIM1P49642 420 aaKnown RBP10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 EMP3P54852 163 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 G2E3Q7L622 706 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 KRT27Q7Z3Y8 459 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ACSBG1Q96GR2 724 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 EIF2S2P20042 333 aaKnown RBP10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 ERICH6BQ5W0A0 696 aa10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 ABCC4O15439 1325 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 KCNQ2O43526 872 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 ANXA1P04083 346 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 PDIA6Q15084 440 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 FAM182BQ5T319 152 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 ARHGAP45Q92619 1136 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 USP16Q9Y5T5 823 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 ZNF831Q5JPB2 1677 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 RREB1Q92766 1687 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 G3V3G9 751 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 BAG6P46379 1132 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PROSER3Q2NL68 480 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 TMEM57Q8N5G2 664 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 SYTL4Q96C24 671 aaPredicted RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 SLC4A9Q96Q91 983 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PHAXQ9H814 394 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 LY75O60449 1722 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 COL5A3P25940 1745 aaPredicted RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 MYH14Q7Z406 1995 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PTPRCP08575 1304 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 FLIIQ13045 1269 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 LRP10Q7Z4F1 713 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 HS6ST3Q8IZP7 471 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 PPP4R2Q9NY27 417 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 TAF1LQ8IZX4 1826 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 F6X3S4 739 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 DEFB132Q7Z7B7 95 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 FTSJ3Q8IY81 847 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 ADCY9O60503 1353 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 MS4A1P11836 297 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms