RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 ARFGEF2Q9Y6D5 1785 aa19.78■□□□□ 0.76
C12orf49-204ENST00000548356 NPHP1O15259 732 aa19.78■□□□□ 0.76
C12orf49-204ENST00000548356 CAMTA2O94983 1202 aa19.78■□□□□ 0.76
C12orf49-204ENST00000548356 ITGBL1O95965 494 aaPredicted RBP19.78■□□□□ 0.76
C12orf49-204ENST00000548356 TEFQ10587 303 aa19.77■□□□□ 0.76
C12orf49-204ENST00000548356 NPM2Q86SE8 214 aaKnown RBP19.77■□□□□ 0.76
C12orf49-204ENST00000548356 C7orf43Q8WVR3 580 aa19.77■□□□□ 0.76
C12orf49-204ENST00000548356 WBP1LQ9NX94 342 aa19.77■□□□□ 0.76
C12orf49-204ENST00000548356 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
C12orf49-204ENST00000548356 DIAPH1O60610 1272 aaKnown RBP19.76■□□□□ 0.75
C12orf49-204ENST00000548356 CCDC93Q567U6 631 aa19.76■□□□□ 0.75
C12orf49-204ENST00000548356 IL17REQ8NFR9 667 aa19.75■□□□□ 0.75
C12orf49-204ENST00000548356 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
C12orf49-204ENST00000548356 A1BGP04217 495 aa19.74■□□□□ 0.75
C12orf49-204ENST00000548356 HACL1Q9UJ83 578 aa19.74■□□□□ 0.75
C12orf49-204ENST00000548356 CACNA1SQ13698 1873 aa19.73■□□□□ 0.75
C12orf49-204ENST00000548356 GNAT3A8MTJ3 354 aa19.73■□□□□ 0.75
C12orf49-204ENST00000548356 LBX1P52954 281 aa19.73■□□□□ 0.75
C12orf49-204ENST00000548356 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
C12orf49-204ENST00000548356 EAPPQ56P03 285 aaPredicted RBP19.73■□□□□ 0.75
C12orf49-204ENST00000548356 GAS2L2Q8NHY3 880 aa19.73■□□□□ 0.75
C12orf49-204ENST00000548356 ZNF541Q9H0D2 1346 aa19.73■□□□□ 0.75
C12orf49-204ENST00000548356 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
C12orf49-204ENST00000548356 RASSF10A6NK89 507 aa19.72■□□□□ 0.75
C12orf49-204ENST00000548356 SLC34A2O95436 690 aa19.72■□□□□ 0.75
C12orf49-204ENST00000548356 NPR1P16066 1061 aa19.72■□□□□ 0.75
C12orf49-204ENST00000548356 CLEC4GQ6UXB4 293 aa19.72■□□□□ 0.75
C12orf49-204ENST00000548356 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
C12orf49-204ENST00000548356 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
C12orf49-204ENST00000548356 SIPA1L3O60292 1781 aaPredicted RBP19.72■□□□□ 0.75
C12orf49-204ENST00000548356 ADAMTSL1Q8N6G6 1762 aa19.72■□□□□ 0.75
C12orf49-204ENST00000548356 KLRG2A4D1S0 409 aaPredicted RBP19.71■□□□□ 0.75
C12orf49-204ENST00000548356 EPHX2P34913 555 aa19.71■□□□□ 0.75
C12orf49-204ENST00000548356 TRIM26Q12899 539 aaPredicted RBP19.71■□□□□ 0.75
C12orf49-204ENST00000548356 DEFB115Q30KQ5 88 aa19.71■□□□□ 0.75
C12orf49-204ENST00000548356 NBPF5PQ86XG9 351 aaPredicted RBP19.71■□□□□ 0.75
C12orf49-204ENST00000548356 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
C12orf49-204ENST00000548356 HSPA8P11142 646 aaKnown RBP19.7■□□□□ 0.74
C12orf49-204ENST00000548356 RTKN2Q8IZC4 609 aa19.7■□□□□ 0.74
C12orf49-204ENST00000548356 ZNF277Q9NRM2 450 aaPredicted RBP19.7■□□□□ 0.74
C12orf49-204ENST00000548356 CEMIPQ8WUJ3 1361 aa19.7■□□□□ 0.74
C12orf49-204ENST00000548356 MAP2K1Q02750 393 aaPredicted RBP19.69■□□□□ 0.74
C12orf49-204ENST00000548356 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
C12orf49-204ENST00000548356 ABHD8Q96I13 439 aa19.69■□□□□ 0.74
C12orf49-204ENST00000548356 ZNF652Q9Y2D9 606 aa19.69■□□□□ 0.74
C12orf49-204ENST00000548356 FZD9O00144 591 aa19.68■□□□□ 0.74
C12orf49-204ENST00000548356 RGL2O15211 777 aa19.67■□□□□ 0.74
C12orf49-204ENST00000548356 MAP1SQ66K74 1059 aaPredicted RBP19.67■□□□□ 0.74
C12orf49-204ENST00000548356 TPTE2Q6XPS3 522 aa19.67■□□□□ 0.74
C12orf49-204ENST00000548356 GPC2Q8N158 579 aa19.67■□□□□ 0.74
C12orf49-204ENST00000548356 RNF123Q5XPI4 1314 aa19.67■□□□□ 0.74
C12orf49-204ENST00000548356 WDR33Q9C0J8 1336 aaKnown RBP19.67■□□□□ 0.74
C12orf49-204ENST00000548356 BTBD11A6QL63 1104 aa19.66■□□□□ 0.74
C12orf49-204ENST00000548356 KCNQ3O43525 872 aa19.66■□□□□ 0.74
C12orf49-204ENST00000548356 IARSP41252 1262 aaKnown RBP19.66■□□□□ 0.74
C12orf49-204ENST00000548356 USP16Q9Y5T5 823 aa19.66■□□□□ 0.74
C12orf49-204ENST00000548356 COL3A1P02461 1466 aaPredicted RBP19.66■□□□□ 0.74
C12orf49-204ENST00000548356 OLFM4Q6UX06 510 aa19.65■□□□□ 0.74
C12orf49-204ENST00000548356 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
C12orf49-204ENST00000548356 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
C12orf49-204ENST00000548356 ALDH1B1P30837 517 aa19.64■□□□□ 0.73
C12orf49-204ENST00000548356 FAM161AQ3B820 660 aa19.64■□□□□ 0.73
C12orf49-204ENST00000548356 SYNE4Q8N205 404 aa19.64■□□□□ 0.73
C12orf49-204ENST00000548356 ABT1Q9ULW3 272 aaKnown RBP19.64■□□□□ 0.73
C12orf49-204ENST00000548356 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
C12orf49-204ENST00000548356 PSMD1Q99460 953 aa19.63■□□□□ 0.73
C12orf49-204ENST00000548356 DDX21Q9NR30 783 aaKnown RBP eCLIP19.63■□□□□ 0.73
C12orf49-204ENST00000548356 NIP7Q9Y221 180 aaKnown RBP eCLIP19.63■□□□□ 0.73
C12orf49-204ENST00000548356 SNED1Q8TER0 1413 aa19.62■□□□□ 0.73
C12orf49-204ENST00000548356 SNRPA1P09661 255 aaKnown RBP19.62■□□□□ 0.73
C12orf49-204ENST00000548356 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
C12orf49-204ENST00000548356 JDP2Q8WYK2 163 aa19.62■□□□□ 0.73
C12orf49-204ENST00000548356 KIF7Q2M1P5 1343 aa19.61■□□□□ 0.73
C12orf49-204ENST00000548356 THSD7BQ9C0I4 1608 aa19.61■□□□□ 0.73
C12orf49-204ENST00000548356 PRAMEF22A3QJZ6 481 aa19.6■□□□□ 0.73
C12orf49-204ENST00000548356 ECE1P42892 770 aa19.6■□□□□ 0.73
C12orf49-204ENST00000548356 EIF6P56537 245 aaKnown RBP19.59■□□□□ 0.73
C12orf49-204ENST00000548356 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
C12orf49-204ENST00000548356 BEGAINQ9BUH8 593 aa19.59■□□□□ 0.73
C12orf49-204ENST00000548356 NBPF26B4DH59 902 aa19.58■□□□□ 0.72
C12orf49-204ENST00000548356 LMOD1P29536 600 aaPredicted RBP19.58■□□□□ 0.72
C12orf49-204ENST00000548356 RGS19P49795 217 aa19.58■□□□□ 0.72
C12orf49-204ENST00000548356 CRY2Q49AN0 593 aa19.58■□□□□ 0.72
C12orf49-204ENST00000548356 NBPF10Q6P3W6 841 aaKnown RBP19.58■□□□□ 0.72
C12orf49-204ENST00000548356 NBPF15Q8N660 670 aa19.58■□□□□ 0.72
C12orf49-204ENST00000548356 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
C12orf49-204ENST00000548356 CAPNS2Q96L46 248 aa19.58■□□□□ 0.72
C12orf49-204ENST00000548356 NPC1L1Q9UHC9 1359 aa19.57■□□□□ 0.72
C12orf49-204ENST00000548356 FAM177BA6PVY3 158 aa19.57■□□□□ 0.72
C12orf49-204ENST00000548356 GTF2E1P29083 439 aaPredicted RBP19.57■□□□□ 0.72
C12orf49-204ENST00000548356 MLLT1Q03111 559 aaPredicted RBP19.57■□□□□ 0.72
C12orf49-204ENST00000548356 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
C12orf49-204ENST00000548356 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
C12orf49-204ENST00000548356 GRIPAP1Q4V328 841 aa19.56■□□□□ 0.72
C12orf49-204ENST00000548356 GPR101Q96P66 508 aaPredicted RBP19.56■□□□□ 0.72
C12orf49-204ENST00000548356 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
C12orf49-204ENST00000548356 LTBP1Q14766 1721 aa19.56■□□□□ 0.72
C12orf49-204ENST00000548356 CCDC85CA6NKD9 419 aa19.55■□□□□ 0.72
C12orf49-204ENST00000548356 SCNN1DP51172 638 aa19.55■□□□□ 0.72
C12orf49-204ENST00000548356 HLFQ16534 295 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms