RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CT47B1P0C2W7 299 aaPredicted RBP22.31■■□□□ 1.16
HDAC7-227ENST00000548080 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
HDAC7-227ENST00000548080 HOXB7P09629 217 aa22.3■■□□□ 1.16
HDAC7-227ENST00000548080 DDR1Q08345 913 aa22.3■■□□□ 1.16
HDAC7-227ENST00000548080 FHDC1Q9C0D6 1143 aaPredicted RBP22.3■■□□□ 1.16
HDAC7-227ENST00000548080 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
HDAC7-227ENST00000548080 TWISTNBQ3B726 338 aaPredicted RBP22.29■■□□□ 1.16
HDAC7-227ENST00000548080 LRP10Q7Z4F1 713 aa22.29■■□□□ 1.16
HDAC7-227ENST00000548080 ERBB4Q15303 1308 aa22.29■■□□□ 1.16
HDAC7-227ENST00000548080 RRP1P56182 461 aaKnown RBP22.28■■□□□ 1.16
HDAC7-227ENST00000548080 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
HDAC7-227ENST00000548080 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
HDAC7-227ENST00000548080 NFIXQ14938 502 aa22.28■■□□□ 1.16
HDAC7-227ENST00000548080 HLFQ16534 295 aa22.28■■□□□ 1.16
HDAC7-227ENST00000548080 XAGE3Q8WTP9 111 aa22.28■■□□□ 1.16
HDAC7-227ENST00000548080 DDX21Q9NR30 783 aaKnown RBP eCLIP22.28■■□□□ 1.16
HDAC7-227ENST00000548080 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
HDAC7-227ENST00000548080 AFDNP55196 1824 aaKnown RBP22.26■■□□□ 1.15
HDAC7-227ENST00000548080 TM4SF1P30408 202 aa22.26■■□□□ 1.15
HDAC7-227ENST00000548080 KIF6Q6ZMV9 814 aa22.26■■□□□ 1.15
HDAC7-227ENST00000548080 COPS6Q7L5N1 327 aa22.26■■□□□ 1.15
HDAC7-227ENST00000548080 NUP98P52948 1817 aa22.25■■□□□ 1.15
HDAC7-227ENST00000548080 POLRMTO00411 1230 aaKnown RBP22.25■■□□□ 1.15
HDAC7-227ENST00000548080 DBF4Q9UBU7 674 aaPredicted RBP22.25■■□□□ 1.15
HDAC7-227ENST00000548080 MAP3K15Q6ZN16 1313 aa22.24■■□□□ 1.15
HDAC7-227ENST00000548080 RARSP54136 660 aaKnown RBP22.24■■□□□ 1.15
HDAC7-227ENST00000548080 IRX6P78412 446 aaPredicted RBP22.24■■□□□ 1.15
HDAC7-227ENST00000548080 NLGN2Q8NFZ4 835 aa22.24■■□□□ 1.15
HDAC7-227ENST00000548080 PHAXQ9H814 394 aaKnown RBP22.24■■□□□ 1.15
HDAC7-227ENST00000548080 SYT17Q9BSW7 474 aa22.23■■□□□ 1.15
HDAC7-227ENST00000548080 CCDC30Q5VVM6 783 aa22.22■■□□□ 1.15
HDAC7-227ENST00000548080 FAM177BA6PVY3 158 aa22.22■■□□□ 1.15
HDAC7-227ENST00000548080 VAMP4O75379 141 aa22.22■■□□□ 1.15
HDAC7-227ENST00000548080 CCDC24Q8N4L8 307 aa22.22■■□□□ 1.15
HDAC7-227ENST00000548080 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
HDAC7-227ENST00000548080 BCAR3O75815 825 aa22.21■■□□□ 1.15
HDAC7-227ENST00000548080 SERPINB2P05120 415 aa22.21■■□□□ 1.15
HDAC7-227ENST00000548080 ERICH6BQ5W0A0 696 aa22.21■■□□□ 1.15
HDAC7-227ENST00000548080 ZNF652Q9Y2D9 606 aa22.21■■□□□ 1.15
HDAC7-227ENST00000548080 GPTP24298 496 aa22.2■■□□□ 1.14
HDAC7-227ENST00000548080 ZNF428Q96B54 188 aa22.2■■□□□ 1.14
HDAC7-227ENST00000548080 HYPKQ9NX55 129 aa22.2■■□□□ 1.14
HDAC7-227ENST00000548080 WWC3Q9ULE0 1092 aa22.2■■□□□ 1.14
HDAC7-227ENST00000548080 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.14
HDAC7-227ENST00000548080 PLIN1O60240 522 aa22.19■■□□□ 1.14
HDAC7-227ENST00000548080 SETDB2Q96T68 719 aa22.19■■□□□ 1.14
HDAC7-227ENST00000548080 NRXN2Q9P2S2 1712 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 C10orf71Q711Q0 1435 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 CLEC4GQ6UXB4 293 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 G2E3Q7L622 706 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 STK31Q9BXU1 1019 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 N4BP2Q86UW6 1770 aaPredicted RBP22.18■■□□□ 1.14
HDAC7-227ENST00000548080 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
HDAC7-227ENST00000548080 GIGYF2Q6Y7W6 1299 aaKnown RBP22.17■■□□□ 1.14
HDAC7-227ENST00000548080 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
HDAC7-227ENST00000548080 ARFGEF2Q9Y6D5 1785 aa22.17■■□□□ 1.14
HDAC7-227ENST00000548080 SLC4A2P04920 1241 aa22.16■■□□□ 1.14
HDAC7-227ENST00000548080 ANKRD36CQ5JPF3 1778 aa22.16■■□□□ 1.14
HDAC7-227ENST00000548080 ALDH1L2Q3SY69 923 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 CD2APQ9Y5K6 639 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 KIAA1551Q9HCM1 1747 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 UBN2Q6ZU65 1347 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 PRR5LQ6MZQ0 368 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 ANKRD13DQ6ZTN6 518 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 SSH1Q8WYL5 1049 aa22.15■■□□□ 1.14
HDAC7-227ENST00000548080 ATP10DQ9P241 1426 aa22.14■■□□□ 1.14
HDAC7-227ENST00000548080 NPHP1O15259 732 aa22.14■■□□□ 1.13
HDAC7-227ENST00000548080 NBPF5PQ86XG9 351 aaPredicted RBP22.14■■□□□ 1.13
HDAC7-227ENST00000548080 PLBD2Q8NHP8 589 aa22.14■■□□□ 1.13
HDAC7-227ENST00000548080 BCL2L13Q9BXK5 485 aa22.14■■□□□ 1.13
HDAC7-227ENST00000548080 SMC4Q9NTJ3 1288 aa22.14■■□□□ 1.13
HDAC7-227ENST00000548080 ANKRD31Q8N7Z5 1873 aa22.14■■□□□ 1.13
HDAC7-227ENST00000548080 ZNF34Q8IZ26 560 aa22.13■■□□□ 1.13
HDAC7-227ENST00000548080 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
HDAC7-227ENST00000548080 PXDNLA1KZ92 1463 aa22.12■■□□□ 1.13
HDAC7-227ENST00000548080 A0A0G2JLW4 131 aa22.12■■□□□ 1.13
HDAC7-227ENST00000548080 RIC3Q7Z5B4 369 aa22.12■■□□□ 1.13
HDAC7-227ENST00000548080 CNBD1Q8NA66 436 aa22.12■■□□□ 1.13
HDAC7-227ENST00000548080 CHMP4AQ9BY43 222 aa22.12■■□□□ 1.13
HDAC7-227ENST00000548080 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
HDAC7-227ENST00000548080 CHRNA5P30532 468 aa22.11■■□□□ 1.13
HDAC7-227ENST00000548080 SUSD4Q5VX71 490 aa22.11■■□□□ 1.13
HDAC7-227ENST00000548080 NUTM1Q86Y26 1132 aa22.11■■□□□ 1.13
HDAC7-227ENST00000548080 RGL2O15211 777 aa22.1■■□□□ 1.13
HDAC7-227ENST00000548080 DPEP1P16444 411 aa22.1■■□□□ 1.13
HDAC7-227ENST00000548080 FRAT1Q92837 279 aaPredicted RBP22.1■■□□□ 1.13
HDAC7-227ENST00000548080 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
HDAC7-227ENST00000548080 BRPF1P55201 1214 aaPredicted RBP22.09■■□□□ 1.13
HDAC7-227ENST00000548080 FLIIQ13045 1269 aa22.09■■□□□ 1.13
HDAC7-227ENST00000548080 TCIRG1Q13488 830 aa22.09■■□□□ 1.13
HDAC7-227ENST00000548080 ADCY9O60503 1353 aa22.09■■□□□ 1.13
HDAC7-227ENST00000548080 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
HDAC7-227ENST00000548080 MYD88Q99836 296 aa22.09■■□□□ 1.13
HDAC7-227ENST00000548080 MAP3K2Q9Y2U5 619 aa22.09■■□□□ 1.13
HDAC7-227ENST00000548080 ABCC12Q96J65 1359 aa22.08■■□□□ 1.13
HDAC7-227ENST00000548080 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.12
HDAC7-227ENST00000548080 ST5P78524 1137 aa22.08■■□□□ 1.12
HDAC7-227ENST00000548080 PDE3AQ14432 1141 aa22.08■■□□□ 1.12
HDAC7-227ENST00000548080 NLRP10Q86W26 655 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1255.2 ms