RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
RAB5C-204ENST00000547517 NPHP1O15259 732 aa15.36■□□□□ 0.05
RAB5C-204ENST00000547517 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
RAB5C-204ENST00000547517 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
RAB5C-204ENST00000547517 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
RAB5C-204ENST00000547517 MAP3K15Q6ZN16 1313 aa15.36■□□□□ 0.05
RAB5C-204ENST00000547517 HOXB7P09629 217 aa15.35■□□□□ 0.05
RAB5C-204ENST00000547517 PDIA6Q15084 440 aa15.35■□□□□ 0.05
RAB5C-204ENST00000547517 HLFQ16534 295 aa15.35■□□□□ 0.05
RAB5C-204ENST00000547517 CLEC4GQ6UXB4 293 aa15.35■□□□□ 0.05
RAB5C-204ENST00000547517 TSR2Q969E8 191 aaKnown RBP15.35■□□□□ 0.05
RAB5C-204ENST00000547517 ZBTB3Q9H5J0 574 aa15.35■□□□□ 0.05
RAB5C-204ENST00000547517 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
RAB5C-204ENST00000547517 BRCA1P38398 1863 aaKnown RBP15.34■□□□□ 0.05
RAB5C-204ENST00000547517 RGL2O15211 777 aa15.34■□□□□ 0.05
RAB5C-204ENST00000547517 CHRNA5P30532 468 aa15.34■□□□□ 0.05
RAB5C-204ENST00000547517 PRR5LQ6MZQ0 368 aa15.34■□□□□ 0.05
RAB5C-204ENST00000547517 LRP10Q7Z4F1 713 aa15.34■□□□□ 0.05
RAB5C-204ENST00000547517 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
RAB5C-204ENST00000547517 CNBD1Q8NA66 436 aa15.34■□□□□ 0.05
RAB5C-204ENST00000547517 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAB5C-204ENST00000547517 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-204ENST00000547517 GRIN3BO60391 1043 aa15.33■□□□□ 0.04
RAB5C-204ENST00000547517 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
RAB5C-204ENST00000547517 NBPF5PQ86XG9 351 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-204ENST00000547517 BCS1LQ9Y276 419 aa15.33■□□□□ 0.04
RAB5C-204ENST00000547517 ANKRD31Q8N7Z5 1873 aa15.33■□□□□ 0.04
RAB5C-204ENST00000547517 ATP10DQ9P241 1426 aa15.33■□□□□ 0.04
RAB5C-204ENST00000547517 COL11A2P13942 1736 aaPredicted RBP15.32■□□□□ 0.04
RAB5C-204ENST00000547517 NUP98P52948 1817 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 ST5P78524 1137 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
RAB5C-204ENST00000547517 C8orf58Q8NAV2 365 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 DDX21Q9NR30 783 aaKnown RBP eCLIP15.32■□□□□ 0.04
RAB5C-204ENST00000547517 IL16Q14005 1332 aa15.32■□□□□ 0.04
RAB5C-204ENST00000547517 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
RAB5C-204ENST00000547517 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
RAB5C-204ENST00000547517 KCNA3P22001 575 aa15.31■□□□□ 0.04
RAB5C-204ENST00000547517 CHD4Q14839 1912 aa15.31■□□□□ 0.04
RAB5C-204ENST00000547517 GPTP24298 496 aa15.3■□□□□ 0.04
RAB5C-204ENST00000547517 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
RAB5C-204ENST00000547517 COPS6Q7L5N1 327 aa15.3■□□□□ 0.04
RAB5C-204ENST00000547517 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
RAB5C-204ENST00000547517 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
RAB5C-204ENST00000547517 PIM2Q9P1W9 311 aa15.3■□□□□ 0.04
RAB5C-204ENST00000547517 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
RAB5C-204ENST00000547517 UBN2Q6ZU65 1347 aa15.29■□□□□ 0.04
RAB5C-204ENST00000547517 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
RAB5C-204ENST00000547517 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
RAB5C-204ENST00000547517 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
RAB5C-204ENST00000547517 BRIP1Q9BX63 1249 aa15.29■□□□□ 0.04
RAB5C-204ENST00000547517 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
RAB5C-204ENST00000547517 H0YIN7 160 aa15.28■□□□□ 0.04
RAB5C-204ENST00000547517 PDE6BP35913 854 aa15.28■□□□□ 0.04
RAB5C-204ENST00000547517 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
RAB5C-204ENST00000547517 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
RAB5C-204ENST00000547517 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
RAB5C-204ENST00000547517 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
RAB5C-204ENST00000547517 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.04
RAB5C-204ENST00000547517 HYPKQ9NX55 129 aa15.27■□□□□ 0.04
RAB5C-204ENST00000547517 IBTKQ9P2D0 1353 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-204ENST00000547517 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-204ENST00000547517 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-204ENST00000547517 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
RAB5C-204ENST00000547517 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
RAB5C-204ENST00000547517 ZNF34Q8IZ26 560 aa15.26■□□□□ 0.03
RAB5C-204ENST00000547517 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
RAB5C-204ENST00000547517 ARFGEF2Q9Y6D5 1785 aa15.26■□□□□ 0.03
RAB5C-204ENST00000547517 HSP90AB3PQ58FF7 597 aa15.25■□□□□ 0.03
RAB5C-204ENST00000547517 SUSD4Q5VX71 490 aa15.25■□□□□ 0.03
RAB5C-204ENST00000547517 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
RAB5C-204ENST00000547517 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
RAB5C-204ENST00000547517 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
RAB5C-204ENST00000547517 PDZRN3Q9UPQ7 1066 aa15.25■□□□□ 0.03
RAB5C-204ENST00000547517 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
RAB5C-204ENST00000547517 NTSR2O95665 410 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 GOLGA2Q08379 1002 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 MIER1Q8N108 512 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 TTLL6Q8N841 843 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
RAB5C-204ENST00000547517 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
RAB5C-204ENST00000547517 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
RAB5C-204ENST00000547517 SRGNP10124 158 aa15.23■□□□□ 0.03
RAB5C-204ENST00000547517 EXOSC9Q06265 439 aaKnown RBP15.23■□□□□ 0.03
RAB5C-204ENST00000547517 ANKRD13DQ6ZTN6 518 aa15.23■□□□□ 0.03
RAB5C-204ENST00000547517 PPP1R42Q7Z4L9 355 aa15.23■□□□□ 0.03
RAB5C-204ENST00000547517 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
RAB5C-204ENST00000547517 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
RAB5C-204ENST00000547517 TCIRG1Q13488 830 aa15.22■□□□□ 0.03
RAB5C-204ENST00000547517 STYK1Q6J9G0 422 aa15.22■□□□□ 0.03
RAB5C-204ENST00000547517 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
RAB5C-204ENST00000547517 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
RAB5C-204ENST00000547517 RIC1Q4ADV7 1423 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms