RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 LMO7Q8WWI1 1683 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 SGSM2O43147 1006 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 ALDH1L1O75891 902 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
SLC38A1-204ENST00000546893 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 PPP1R42Q7Z4L9 355 aa16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
SLC38A1-204ENST00000546893 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 HIP1O00291 1037 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 KCNJ4P48050 445 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 NFAT5O94916 1531 aa16.45■□□□□ 0.22
SLC38A1-204ENST00000546893 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
SLC38A1-204ENST00000546893 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
SLC38A1-204ENST00000546893 ZNF771Q7L3S4 317 aaPredicted RBP16.44■□□□□ 0.22
SLC38A1-204ENST00000546893 TM6SF1Q9BZW5 370 aa16.44■□□□□ 0.22
SLC38A1-204ENST00000546893 PALD1Q9ULE6 856 aa16.44■□□□□ 0.22
SLC38A1-204ENST00000546893 LTN1O94822 1766 aa16.43■□□□□ 0.22
SLC38A1-204ENST00000546893 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
SLC38A1-204ENST00000546893 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
SLC38A1-204ENST00000546893 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
SLC38A1-204ENST00000546893 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
SLC38A1-204ENST00000546893 LIMCH1Q9UPQ0 1083 aa16.43■□□□□ 0.22
SLC38A1-204ENST00000546893 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 PRIMPOLQ96LW4 560 aa16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 HMGN5P82970 282 aaKnown RBP16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 KCNB2Q92953 911 aa16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 DNAJC2Q99543 621 aaKnown RBP16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
SLC38A1-204ENST00000546893 TTC14Q96N46 770 aa16.41■□□□□ 0.22
SLC38A1-204ENST00000546893 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
SLC38A1-204ENST00000546893 SYCE3A1L190 88 aa16.41■□□□□ 0.22
SLC38A1-204ENST00000546893 TEFQ10587 303 aa16.41■□□□□ 0.22
SLC38A1-204ENST00000546893 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
SLC38A1-204ENST00000546893 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 U2AF2P26368 475 aaKnown RBP eCLIP16.4■□□□□ 0.223e-6■■□□□ 13.9
SLC38A1-204ENST00000546893 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
SLC38A1-204ENST00000546893 ZSCAN22P10073 491 aaPredicted RBP16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 UNC5CLQ8IV45 518 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 RPAP1Q9BWH6 1393 aaPredicted RBP16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 SETD1BQ9UPS6 1966 aaKnown RBP16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 KCNA6P17658 529 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 UBE2HP62256 183 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 ECHDC1Q9NTX5 307 aa16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
SLC38A1-204ENST00000546893 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
SLC38A1-204ENST00000546893 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
SLC38A1-204ENST00000546893 ZNF142P52746 1687 aaPredicted RBP16.38■□□□□ 0.21
SLC38A1-204ENST00000546893 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 UTYO14607 1347 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
SLC38A1-204ENST00000546893 STX6O43752 255 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 CAPN2P17655 700 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 SLIT3O75094 1523 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 ADCY9O60503 1353 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 PSMA5P28066 241 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 USP48Q86UV5 1035 aa16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 ALDH8A1Q9H2A2 487 aaPredicted RBP16.36■□□□□ 0.21
SLC38A1-204ENST00000546893 NBPF7P0C2Y1 421 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms