RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
CHPT1-203ENST00000546873 ZNF232Q9UNY5 417 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 PCDHGC4Q9Y5F7 938 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 SHROOM2Q13796 1616 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 THBS1P07996 1170 aa11.29□□□□□ -0.6
CHPT1-203ENST00000546873 BMP4P12644 408 aa11.29□□□□□ -0.6
CHPT1-203ENST00000546873 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
CHPT1-203ENST00000546873 A0A1W2PNR3 127 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 ATXN7O15265 892 aaPredicted RBP11.28□□□□□ -0.6
CHPT1-203ENST00000546873 CLDN10P78369 228 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 ACDQ96AP0 544 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 ZCCHC2Q9C0B9 1178 aaKnown RBP11.28□□□□□ -0.6
CHPT1-203ENST00000546873 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
CHPT1-203ENST00000546873 USP3Q9Y6I4 520 aa11.28□□□□□ -0.6
CHPT1-203ENST00000546873 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
CHPT1-203ENST00000546873 RASA1P20936 1047 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 FGFR3P22607 806 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 UBAP2LQ14157 1087 aaKnown RBP11.27□□□□□ -0.61
CHPT1-203ENST00000546873 TEAD4Q15561 434 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 PODNQ7Z5L7 613 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
CHPT1-203ENST00000546873 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
CHPT1-203ENST00000546873 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
CHPT1-203ENST00000546873 MAPKBP1O60336 1514 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 TSPOAP1O95153 1857 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 BNIP3LO60238 219 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 NOS2P35228 1153 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
CHPT1-203ENST00000546873 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 TMEM151AQ8N4L1 468 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 KIAA1024Q9UPX6 916 aa11.26□□□□□ -0.61
CHPT1-203ENST00000546873 MAFBQ9Y5Q3 323 aaPredicted RBP11.26□□□□□ -0.61
CHPT1-203ENST00000546873 SERTM1A2A2V5 107 aa11.25□□□□□ -0.61
CHPT1-203ENST00000546873 M0R2N6 131 aa11.25□□□□□ -0.61
CHPT1-203ENST00000546873 FOXK2Q01167 660 aa11.25□□□□□ -0.61
CHPT1-203ENST00000546873 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
CHPT1-203ENST00000546873 ZIC5Q96T25 663 aa11.25□□□□□ -0.61
CHPT1-203ENST00000546873 EPHA4P54764 986 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 PSMA6P60900 246 aaKnown RBP11.24□□□□□ -0.61
CHPT1-203ENST00000546873 RASSF7Q02833 373 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 KANK3Q6NY19 840 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 SIX5Q8N196 739 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 GOLGA6L1Q8N7Z2 621 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
CHPT1-203ENST00000546873 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
CHPT1-203ENST00000546873 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
CHPT1-203ENST00000546873 OIP5O43482 229 aa11.23□□□□□ -0.61
CHPT1-203ENST00000546873 GDF11O95390 407 aa11.23□□□□□ -0.61
CHPT1-203ENST00000546873 IRS1P35568 1242 aa11.23□□□□□ -0.61
CHPT1-203ENST00000546873 TBCELQ5QJ74 424 aa11.23□□□□□ -0.61
CHPT1-203ENST00000546873 BEND7Q8N7W2 519 aaPredicted RBP11.23□□□□□ -0.61
CHPT1-203ENST00000546873 CTBSQ01459 385 aa11.22□□□□□ -0.61
CHPT1-203ENST00000546873 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
CHPT1-203ENST00000546873 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
CHPT1-203ENST00000546873 GPC6Q9Y625 555 aaPredicted RBP11.22□□□□□ -0.61
CHPT1-203ENST00000546873 ADCY10Q96PN6 1610 aa11.21□□□□□ -0.61
CHPT1-203ENST00000546873 DCDC2BA2VCK2 349 aa11.21□□□□□ -0.61
CHPT1-203ENST00000546873 TXLNAP40222 546 aa11.21□□□□□ -0.61
CHPT1-203ENST00000546873 SEC13P55735 322 aa11.21□□□□□ -0.61
CHPT1-203ENST00000546873 GALNT6Q8NCL4 622 aa11.21□□□□□ -0.61
CHPT1-203ENST00000546873 ZDHHC1Q8WTX9 485 aa11.21□□□□□ -0.61
CHPT1-203ENST00000546873 SFI1A8K8P3 1242 aa11.2□□□□□ -0.62
CHPT1-203ENST00000546873 FAM157BP0CG42 384 aa11.2□□□□□ -0.62
CHPT1-203ENST00000546873 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
CHPT1-203ENST00000546873 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
CHPT1-203ENST00000546873 TSEN2Q8NCE0 465 aaKnown RBP11.2□□□□□ -0.62
CHPT1-203ENST00000546873 TSPAN10Q9H1Z9 355 aaPredicted RBP11.2□□□□□ -0.62
CHPT1-203ENST00000546873 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
CHPT1-203ENST00000546873 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
CHPT1-203ENST00000546873 TNP2Q05952 138 aa11.19□□□□□ -0.62
CHPT1-203ENST00000546873 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
CHPT1-203ENST00000546873 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
CHPT1-203ENST00000546873 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
CHPT1-203ENST00000546873 ARAFP10398 606 aa11.18□□□□□ -0.62
CHPT1-203ENST00000546873 AMPD1P23109 780 aa11.18□□□□□ -0.62
CHPT1-203ENST00000546873 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
CHPT1-203ENST00000546873 EDARADDQ8WWZ3 215 aa11.18□□□□□ -0.62
CHPT1-203ENST00000546873 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
CHPT1-203ENST00000546873 DNMT3AQ9Y6K1 912 aaPredicted RBP11.18□□□□□ -0.62
CHPT1-203ENST00000546873 EML1O00423 815 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 C2CD2LO14523 706 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 LAMC2Q13753 1193 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 FAM182BQ5T319 152 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 C1orf53Q5VUE5 145 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 SLCO4C1Q6ZQN7 724 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 HINFPQ9BQA5 517 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 GGA1Q9UJY5 639 aa11.17□□□□□ -0.62
CHPT1-203ENST00000546873 PRR12Q9ULL5 1215 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms