RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 DLG5Q8TDM6 1919 aa18.92■□□□□ 0.62
TROAP-203ENST00000546735 EIF4A1P60842 406 aaKnown RBP18.92■□□□□ 0.62
TROAP-203ENST00000546735 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
TROAP-203ENST00000546735 NBPF5PQ86XG9 351 aaPredicted RBP18.92■□□□□ 0.62
TROAP-203ENST00000546735 PNISRQ8TF01 805 aaKnown RBP18.92■□□□□ 0.62
TROAP-203ENST00000546735 PDZRN3Q9UPQ7 1066 aa18.92■□□□□ 0.62
TROAP-203ENST00000546735 NIP7Q9Y221 180 aaKnown RBP eCLIP18.92■□□□□ 0.62
TROAP-203ENST00000546735 RALBP1Q15311 655 aa18.91■□□□□ 0.62
TROAP-203ENST00000546735 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
TROAP-203ENST00000546735 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
TROAP-203ENST00000546735 SRGNP10124 158 aa18.9■□□□□ 0.62
TROAP-203ENST00000546735 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
TROAP-203ENST00000546735 KDM3BQ7LBC6 1761 aa18.89■□□□□ 0.61
TROAP-203ENST00000546735 STYK1Q6J9G0 422 aa18.89■□□□□ 0.61
TROAP-203ENST00000546735 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
TROAP-203ENST00000546735 RBM46Q8TBY0 533 aaKnown RBP18.89■□□□□ 0.61
TROAP-203ENST00000546735 CNKSR1Q969H4 720 aa18.89■□□□□ 0.61
TROAP-203ENST00000546735 MASTLQ96GX5 879 aa18.89■□□□□ 0.61
TROAP-203ENST00000546735 MYL6BP14649 208 aa18.88■□□□□ 0.61
TROAP-203ENST00000546735 RIPK4P57078 832 aa18.88■□□□□ 0.61
TROAP-203ENST00000546735 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
TROAP-203ENST00000546735 LAMB4A4D0S4 1761 aa18.87■□□□□ 0.61
TROAP-203ENST00000546735 TPTE2Q6XPS3 522 aa18.87■□□□□ 0.61
TROAP-203ENST00000546735 ZC3H4Q9UPT8 1303 aaKnown RBP18.87■□□□□ 0.61
TROAP-203ENST00000546735 CEP350Q5VT06 3117 aa18.87■□□□□ 0.61
TROAP-203ENST00000546735 GLTPD2A6NH11 291 aa18.86■□□□□ 0.61
TROAP-203ENST00000546735 APLP1P51693 650 aa18.86■□□□□ 0.61
TROAP-203ENST00000546735 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
TROAP-203ENST00000546735 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
TROAP-203ENST00000546735 HTRA3P83110 453 aa18.85■□□□□ 0.61
TROAP-203ENST00000546735 TAOK3Q9H2K8 898 aa18.85■□□□□ 0.61
TROAP-203ENST00000546735 SLX4Q8IY92 1834 aa18.85■□□□□ 0.61
TROAP-203ENST00000546735 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
TROAP-203ENST00000546735 TIAM2Q8IVF5 1701 aa18.84■□□□□ 0.61
TROAP-203ENST00000546735 RGL2O15211 777 aa18.84■□□□□ 0.61
TROAP-203ENST00000546735 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
TROAP-203ENST00000546735 TMPOP42166 694 aaKnown RBP18.84■□□□□ 0.61
TROAP-203ENST00000546735 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
TROAP-203ENST00000546735 ZBTB3Q9H5J0 574 aa18.84■□□□□ 0.61
TROAP-203ENST00000546735 TNRC6CQ9HCJ0 1690 aaKnown RBP18.83■□□□□ 0.61
TROAP-203ENST00000546735 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.61
TROAP-203ENST00000546735 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.6
TROAP-203ENST00000546735 NPR1P16066 1061 aa18.83■□□□□ 0.6
TROAP-203ENST00000546735 GPTP24298 496 aa18.83■□□□□ 0.6
TROAP-203ENST00000546735 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
TROAP-203ENST00000546735 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
TROAP-203ENST00000546735 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.6
TROAP-203ENST00000546735 NUTM1Q86Y26 1132 aa18.83■□□□□ 0.6
TROAP-203ENST00000546735 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
TROAP-203ENST00000546735 CCDC88AQ3V6T2 1871 aa18.82■□□□□ 0.6
TROAP-203ENST00000546735 ERVV-1B6SEH8 477 aa18.82■□□□□ 0.6
TROAP-203ENST00000546735 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
TROAP-203ENST00000546735 FSTL1Q12841 308 aa18.82■□□□□ 0.6
TROAP-203ENST00000546735 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
TROAP-203ENST00000546735 FER1L6Q2WGJ9 1857 aa18.82■□□□□ 0.6
TROAP-203ENST00000546735 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
TROAP-203ENST00000546735 LTBP3Q9NS15 1303 aa18.81■□□□□ 0.6
TROAP-203ENST00000546735 POTECB2RU33 542 aa18.81■□□□□ 0.6
TROAP-203ENST00000546735 ANXA1P04083 346 aa18.81■□□□□ 0.6
TROAP-203ENST00000546735 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
TROAP-203ENST00000546735 UBN2Q6ZU65 1347 aa18.8■□□□□ 0.6
TROAP-203ENST00000546735 CCDC93Q567U6 631 aa18.8■□□□□ 0.6
TROAP-203ENST00000546735 SOGA3Q5TF21 947 aa18.8■□□□□ 0.6
TROAP-203ENST00000546735 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
TROAP-203ENST00000546735 DNAJC5GQ8N7S2 189 aa18.8■□□□□ 0.6
TROAP-203ENST00000546735 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
TROAP-203ENST00000546735 PDIA6Q15084 440 aa18.79■□□□□ 0.6
TROAP-203ENST00000546735 PROSER3Q2NL68 480 aa18.79■□□□□ 0.6
TROAP-203ENST00000546735 SUSD4Q5VX71 490 aa18.79■□□□□ 0.6
TROAP-203ENST00000546735 SMC1BQ8NDV3 1235 aa18.79■□□□□ 0.6
TROAP-203ENST00000546735 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
TROAP-203ENST00000546735 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
TROAP-203ENST00000546735 DDNO94850 711 aaPredicted RBP18.78■□□□□ 0.6
TROAP-203ENST00000546735 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
TROAP-203ENST00000546735 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
TROAP-203ENST00000546735 LRP10Q7Z4F1 713 aa18.78■□□□□ 0.6
TROAP-203ENST00000546735 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
TROAP-203ENST00000546735 KRT24Q2M2I5 525 aa18.77■□□□□ 0.6
TROAP-203ENST00000546735 GIGYF2Q6Y7W6 1299 aaKnown RBP18.77■□□□□ 0.6
TROAP-203ENST00000546735 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.6
TROAP-203ENST00000546735 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.6
TROAP-203ENST00000546735 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
TROAP-203ENST00000546735 LAS1LQ9Y4W2 734 aaKnown RBP18.77■□□□□ 0.6
TROAP-203ENST00000546735 WDR90Q96KV7 1748 aa18.77■□□□□ 0.59
TROAP-203ENST00000546735 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
TROAP-203ENST00000546735 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
TROAP-203ENST00000546735 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
TROAP-203ENST00000546735 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
TROAP-203ENST00000546735 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
TROAP-203ENST00000546735 NUP98P52948 1817 aa18.76■□□□□ 0.59
TROAP-203ENST00000546735 NTSR2O95665 410 aa18.75■□□□□ 0.59
TROAP-203ENST00000546735 CRY2Q49AN0 593 aa18.75■□□□□ 0.59
TROAP-203ENST00000546735 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
TROAP-203ENST00000546735 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
TROAP-203ENST00000546735 C3orf67Q6ZVT6 689 aa18.74■□□□□ 0.59
TROAP-203ENST00000546735 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
TROAP-203ENST00000546735 DICER1Q9UPY3 1922 aaKnown RBP18.74■□□□□ 0.59
TROAP-203ENST00000546735 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
TROAP-203ENST00000546735 CHL1O00533 1208 aa18.73■□□□□ 0.59
TROAP-203ENST00000546735 POTEIP0CG38 1075 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms