RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
DDX55-213ENST00000545042 ST5P78524 1137 aa17.22■□□□□ 0.35
DDX55-213ENST00000545042 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
DDX55-213ENST00000545042 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
DDX55-213ENST00000545042 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
DDX55-213ENST00000545042 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX55-213ENST00000545042 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.35
DDX55-213ENST00000545042 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
DDX55-213ENST00000545042 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
DDX55-213ENST00000545042 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
DDX55-213ENST00000545042 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
DDX55-213ENST00000545042 NBPF5PQ86XG9 351 aaPredicted RBP17.21■□□□□ 0.35
DDX55-213ENST00000545042 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
DDX55-213ENST00000545042 H0YIN7 160 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 KCNA3P22001 575 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 CHRNA5P30532 468 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 PDE6BP35913 854 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 HLFQ16534 295 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 PRR5LQ6MZQ0 368 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 TTLL7Q6ZT98 887 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
DDX55-213ENST00000545042 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
DDX55-213ENST00000545042 PDIA6Q15084 440 aa17.19■□□□□ 0.34
DDX55-213ENST00000545042 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
DDX55-213ENST00000545042 C2CD5Q86YS7 1000 aa17.19■□□□□ 0.34
DDX55-213ENST00000545042 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
DDX55-213ENST00000545042 ZBTB3Q9H5J0 574 aa17.19■□□□□ 0.34
DDX55-213ENST00000545042 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDX55-213ENST00000545042 PROSER3Q2NL68 480 aa17.18■□□□□ 0.34
DDX55-213ENST00000545042 ANXA1P04083 346 aa17.17■□□□□ 0.34
DDX55-213ENST00000545042 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
DDX55-213ENST00000545042 CCDC24Q8N4L8 307 aa17.17■□□□□ 0.34
DDX55-213ENST00000545042 NYXQ9GZU5 481 aa17.17■□□□□ 0.34
DDX55-213ENST00000545042 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
DDX55-213ENST00000545042 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
DDX55-213ENST00000545042 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
DDX55-213ENST00000545042 IL16Q14005 1332 aa17.17■□□□□ 0.34
DDX55-213ENST00000545042 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
DDX55-213ENST00000545042 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
DDX55-213ENST00000545042 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
DDX55-213ENST00000545042 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
DDX55-213ENST00000545042 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
DDX55-213ENST00000545042 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
DDX55-213ENST00000545042 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
DDX55-213ENST00000545042 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
DDX55-213ENST00000545042 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
DDX55-213ENST00000545042 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
DDX55-213ENST00000545042 TTLL6Q8N841 843 aa17.15■□□□□ 0.34
DDX55-213ENST00000545042 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
DDX55-213ENST00000545042 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
DDX55-213ENST00000545042 GPTP24298 496 aa17.14■□□□□ 0.33
DDX55-213ENST00000545042 HSP90AB3PQ58FF7 597 aa17.14■□□□□ 0.33
DDX55-213ENST00000545042 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX55-213ENST00000545042 NUP98P52948 1817 aa17.14■□□□□ 0.33
DDX55-213ENST00000545042 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
DDX55-213ENST00000545042 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
DDX55-213ENST00000545042 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
DDX55-213ENST00000545042 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
DDX55-213ENST00000545042 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
DDX55-213ENST00000545042 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
DDX55-213ENST00000545042 ZNF34Q8IZ26 560 aa17.12■□□□□ 0.33
DDX55-213ENST00000545042 ZNF784Q8NCA9 323 aaPredicted RBP17.12■□□□□ 0.33
DDX55-213ENST00000545042 IBTKQ9P2D0 1353 aaPredicted RBP17.12■□□□□ 0.33
DDX55-213ENST00000545042 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
DDX55-213ENST00000545042 DLEC1Q9Y238 1755 aa17.11■□□□□ 0.33
DDX55-213ENST00000545042 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
DDX55-213ENST00000545042 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
DDX55-213ENST00000545042 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
DDX55-213ENST00000545042 MASTLQ96GX5 879 aa17.11■□□□□ 0.33
DDX55-213ENST00000545042 SRGNP10124 158 aa17.1■□□□□ 0.33
DDX55-213ENST00000545042 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
DDX55-213ENST00000545042 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
DDX55-213ENST00000545042 UBN2Q6ZU65 1347 aa17.1■□□□□ 0.33
DDX55-213ENST00000545042 NPR1P16066 1061 aa17.09■□□□□ 0.33
DDX55-213ENST00000545042 GOLGA2Q08379 1002 aa17.09■□□□□ 0.33
DDX55-213ENST00000545042 TCIRG1Q13488 830 aa17.09■□□□□ 0.33
DDX55-213ENST00000545042 SUSD4Q5VX71 490 aa17.09■□□□□ 0.33
DDX55-213ENST00000545042 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
DDX55-213ENST00000545042 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
DDX55-213ENST00000545042 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
DDX55-213ENST00000545042 FANCIQ9NVI1 1328 aa17.08■□□□□ 0.32
DDX55-213ENST00000545042 KLRG2A4D1S0 409 aaPredicted RBP17.08■□□□□ 0.32
DDX55-213ENST00000545042 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
DDX55-213ENST00000545042 ERFEQ4G0M1 354 aa17.08■□□□□ 0.32
DDX55-213ENST00000545042 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
DDX55-213ENST00000545042 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
DDX55-213ENST00000545042 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
DDX55-213ENST00000545042 NTSR2O95665 410 aa17.07■□□□□ 0.32
DDX55-213ENST00000545042 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
DDX55-213ENST00000545042 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
DDX55-213ENST00000545042 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
DDX55-213ENST00000545042 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
DDX55-213ENST00000545042 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
DDX55-213ENST00000545042 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
DDX55-213ENST00000545042 RIC1Q4ADV7 1423 aa17.05■□□□□ 0.32
DDX55-213ENST00000545042 ABCC12Q96J65 1359 aa17.05■□□□□ 0.32
DDX55-213ENST00000545042 C21orf2O43822 256 aa17.05■□□□□ 0.32
DDX55-213ENST00000545042 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms