RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	NPAS3	Q8IXF0	933 aa		9.76	□□□□□ -0.85
LEMD3-205	ENST00000544506	SUSD3	Q96L08	255 aa		9.76	□□□□□ -0.85
LEMD3-205	ENST00000544506	TERT	O14746	1132 aa	Known RBP	9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	SERPINB4	P48594	390 aa		9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	KCNA1	Q09470	495 aa		9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	NLRP8	Q86W28	1048 aa		9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	ZNF280C	Q8ND82	737 aa		9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	GMCL1	Q96IK5	515 aa		9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	GJA3	Q9Y6H8	435 aa		9.75	□□□□□ -0.85
LEMD3-205	ENST00000544506	TNFRSF10B	O14763	440 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	UBAP2L	Q14157	1087 aa	Known RBP	9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	HIF1A	Q16665	826 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	C11orf91	Q3C1V1	193 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	AEBP1	Q8IUX7	1158 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	VWA5B2	Q8N398	1253 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	HELQ	Q8TDG4	1101 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	NANOS1	Q8WY41	292 aa	Known RBP	9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	BCS1L	Q9Y276	419 aa		9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.74	□□□□□ -0.85
LEMD3-205	ENST00000544506	ABL1	P00519	1130 aa		9.73	□□□□□ -0.85
LEMD3-205	ENST00000544506	ZNF211	Q13398	564 aa	Predicted RBP	9.73	□□□□□ -0.85
LEMD3-205	ENST00000544506	CCER1	Q8TC90	406 aa	Predicted RBP	9.73	□□□□□ -0.85
LEMD3-205	ENST00000544506	NEUROD4	Q9HD90	331 aa		9.73	□□□□□ -0.85
LEMD3-205	ENST00000544506	GNE	Q9Y223	722 aa	Known RBP	9.73	□□□□□ -0.85
LEMD3-205	ENST00000544506	TGFBR3L	H3BV60	316 aa		9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	MTMR3	Q13615	1198 aa		9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	SV2A	Q7L0J3	742 aa		9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	KCTD17	Q8N5Z5	321 aa		9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	GTPBP3	Q969Y2	492 aa	Known RBP	9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	ZCCHC2	Q9C0B9	1178 aa	Known RBP	9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	ANKIB1	Q9P2G1	1089 aa		9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	IVNS1ABP	Q9Y6Y0	642 aa		9.72	□□□□□ -0.85
LEMD3-205	ENST00000544506	FAM26D	Q5JW98	314 aa		9.71	□□□□□ -0.86
LEMD3-205	ENST00000544506	IER5	Q5VY09	327 aa		9.71	□□□□□ -0.86
LEMD3-205	ENST00000544506	FIGNL1	Q6PIW4	674 aa		9.71	□□□□□ -0.86
LEMD3-205	ENST00000544506	ANO2	Q9NQ90	1003 aa		9.71	□□□□□ -0.86
LEMD3-205	ENST00000544506	GPR25	O00155	361 aa		9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	BRD2	P25440	801 aa	Known RBP	9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	SAMD5	Q5TGI4	173 aa		9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	SLC16A10	Q8TF71	515 aa		9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	IFT43	Q96FT9	208 aa		9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	STIM2	Q9P246	746 aa		9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	EGFL7	Q9UHF1	273 aa		9.7	□□□□□ -0.86
LEMD3-205	ENST00000544506	DCDC2B	A2VCK2	349 aa		9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	PATL2	C9JE40	543 aa	Known RBP	9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	ATXN7	O15265	892 aa	Predicted RBP	9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	VSIG8	P0DPA2	414 aa		9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	TYRO3	Q06418	890 aa		9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	NFX1	Q12986	1120 aa	Known RBP	9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	ERBB4	Q15303	1308 aa		9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	ETFBKMT	Q8IXQ9	262 aa		9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	ZNF775	Q96BV0	537 aa	Predicted RBP	9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	DMGDH	Q9UI17	866 aa	Known RBP	9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	PCDHGC4	Q9Y5F7	938 aa		9.69	□□□□□ -0.86
LEMD3-205	ENST00000544506	BNIP3L	O60238	219 aa		9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506	FAM157B	P0CG42	384 aa		9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506	MPST	P25325	297 aa		9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506	BTLA	Q7Z6A9	289 aa		9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506	GPR161	Q8N6U8	529 aa	Known RBP	9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506	ABHD17A	Q96GS6	310 aa		9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506	NDFIP2	Q9NV92	336 aa		9.68	□□□□□ -0.86
LEMD3-205	ENST00000544506		H3BRB1	525 aa		9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	KHNYN	O15037	678 aa	Known RBP	9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	SF3B2	Q13435	895 aa	Known RBP	9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	FOXR1	Q6PIV2	292 aa		9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	TREML1	Q86YW5	311 aa		9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	ABTB2	Q8N961	1025 aa		9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	CEP63	Q96MT8	703 aa		9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	TRERF1	Q96PN7	1200 aa		9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	TUT1	Q9H6E5	874 aa	Known RBP	9.67	□□□□□ -0.86
LEMD3-205	ENST00000544506	ICMT	O60725	284 aa		9.66	□□□□□ -0.86
LEMD3-205	ENST00000544506	MICAL2	O94851	1124 aa		9.66	□□□□□ -0.86
LEMD3-205	ENST00000544506	IDH3A	P50213	366 aa		9.66	□□□□□ -0.86
LEMD3-205	ENST00000544506	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.66	□□□□□ -0.86
LEMD3-205	ENST00000544506	IRF7	Q92985	503 aa		9.66	□□□□□ -0.86
LEMD3-205	ENST00000544506	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.66	□□□□□ -0.86
LEMD3-205	ENST00000544506	ZBTB39	O15060	712 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	EFS	O43281	561 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	MAPT	P10636	758 aa	Known RBP	9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	TNP2	Q05952	138 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	LCE2C	Q5TA81	110 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	GLYCTK	Q8IVS8	523 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	CFHR5	Q9BXR6	569 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	BRD7	Q9NPI1	651 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	HCN2	Q9UL51	889 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	PHF24	Q9UPV7	400 aa		9.65	□□□□□ -0.86
LEMD3-205	ENST00000544506	SOWAHD	A6NJG2	315 aa		9.64	□□□□□ -0.87
LEMD3-205	ENST00000544506	NPR3	P17342	541 aa		9.64	□□□□□ -0.87
LEMD3-205	ENST00000544506	GAS6	Q14393	721 aa		9.64	□□□□□ -0.87
LEMD3-205	ENST00000544506	WFS1	O76024	890 aa		9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	INPP5B	P32019	993 aa		9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	ZAP70	P43403	619 aa		9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	EIF1AX	P47813	144 aa	Known RBP	9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	ARSD	P51689	593 aa		9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	NOM1	Q5C9Z4	860 aa	Known RBP	9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	STRN4	Q9NRL3	753 aa		9.63	□□□□□ -0.87
LEMD3-205	ENST00000544506	OPLAH	O14841	1288 aa		9.62	□□□□□ -0.87
LEMD3-205	ENST00000544506	FAM13A	O94988	1023 aa		9.62	□□□□□ -0.87
LEMD3-205	ENST00000544506	FGFR3	P22607	806 aa		9.62	□□□□□ -0.87

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