RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 NBPF5PQ86XG9 351 aaPredicted RBP24.61■■□□□ 1.53
TDG-208ENST00000544060 NGEFQ8N5V2 710 aa24.61■■□□□ 1.53
TDG-208ENST00000544060 ADAMTS8Q9UP79 889 aa24.61■■□□□ 1.53
TDG-208ENST00000544060 RGL2O15211 777 aa24.6■■□□□ 1.53
TDG-208ENST00000544060 C9orf131Q5VYM1 1079 aa24.6■■□□□ 1.53
TDG-208ENST00000544060 ZNF622Q969S3 477 aaKnown RBP eCLIP24.6■■□□□ 1.53
TDG-208ENST00000544060 BABAM1Q9NWV8 329 aa24.6■■□□□ 1.53
TDG-208ENST00000544060 MYL6BP14649 208 aa24.59■■□□□ 1.53
TDG-208ENST00000544060 NIP7Q9Y221 180 aaKnown RBP eCLIP24.59■■□□□ 1.53
TDG-208ENST00000544060 COL11A2P13942 1736 aaPredicted RBP24.58■■□□□ 1.53
TDG-208ENST00000544060 KIF6Q6ZMV9 814 aa24.58■■□□□ 1.53
TDG-208ENST00000544060 RNF181Q9P0P0 153 aa24.57■■□□□ 1.52
TDG-208ENST00000544060 SENP3-EIF4A1A0A087X0R7 540 aa24.56■■□□□ 1.52
TDG-208ENST00000544060 ERBB4Q15303 1308 aa24.56■■□□□ 1.52
TDG-208ENST00000544060 HLFQ16534 295 aa24.55■■□□□ 1.52
TDG-208ENST00000544060 TPTE2Q6XPS3 522 aa24.55■■□□□ 1.52
TDG-208ENST00000544060 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
TDG-208ENST00000544060 FAM177BA6PVY3 158 aa24.54■■□□□ 1.52
TDG-208ENST00000544060 ERVV-1B6SEH8 477 aa24.54■■□□□ 1.52
TDG-208ENST00000544060 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
TDG-208ENST00000544060 RASSF7Q02833 373 aa24.54■■□□□ 1.52
TDG-208ENST00000544060 TRIM35Q9UPQ4 493 aa24.54■■□□□ 1.52
TDG-208ENST00000544060 MAP3K15Q6ZN16 1313 aa24.54■■□□□ 1.52
TDG-208ENST00000544060 TTLL7Q6ZT98 887 aa24.53■■□□□ 1.52
TDG-208ENST00000544060 SBF1O95248 1867 aa24.52■■□□□ 1.52
TDG-208ENST00000544060 GTF2E1P29083 439 aaPredicted RBP24.52■■□□□ 1.52
TDG-208ENST00000544060 STYK1Q6J9G0 422 aa24.52■■□□□ 1.52
TDG-208ENST00000544060 CNKSR1Q969H4 720 aa24.52■■□□□ 1.52
TDG-208ENST00000544060 ZNF219Q9P2Y4 722 aaPredicted RBP24.52■■□□□ 1.52
TDG-208ENST00000544060 NUP98P52948 1817 aa24.51■■□□□ 1.51
TDG-208ENST00000544060 SRGNP10124 158 aa24.51■■□□□ 1.51
TDG-208ENST00000544060 MASTLQ96GX5 879 aa24.51■■□□□ 1.51
TDG-208ENST00000544060 ZBTB3Q9H5J0 574 aa24.51■■□□□ 1.51
TDG-208ENST00000544060 CACNA1SQ13698 1873 aa24.51■■□□□ 1.51
TDG-208ENST00000544060 C21orf2O43822 256 aa24.5■■□□□ 1.51
TDG-208ENST00000544060 LMNB1P20700 586 aa24.5■■□□□ 1.51
TDG-208ENST00000544060 CHL1O00533 1208 aa24.49■■□□□ 1.51
TDG-208ENST00000544060 NYXQ9GZU5 481 aa24.49■■□□□ 1.51
TDG-208ENST00000544060 KIF3CO14782 793 aa24.48■■□□□ 1.51
TDG-208ENST00000544060 KDM2BQ8NHM5 1336 aa24.48■■□□□ 1.51
TDG-208ENST00000544060 NECTIN2Q92692 538 aa24.48■■□□□ 1.51
TDG-208ENST00000544060 ARFGEF2Q9Y6D5 1785 aa24.47■■□□□ 1.51
TDG-208ENST00000544060 PRPF40BQ6NWY9 871 aaKnown RBP24.47■■□□□ 1.51
TDG-208ENST00000544060 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
TDG-208ENST00000544060 NFKBIEO00221 500 aa24.46■■□□□ 1.51
TDG-208ENST00000544060 APAF1O14727 1248 aa24.46■■□□□ 1.51
TDG-208ENST00000544060 NPR1P16066 1061 aa24.46■■□□□ 1.51
TDG-208ENST00000544060 GPTP24298 496 aa24.46■■□□□ 1.51
TDG-208ENST00000544060 NMRK2Q9NPI5 230 aa24.46■■□□□ 1.51
TDG-208ENST00000544060 SLX4Q8IY92 1834 aa24.45■■□□□ 1.5
TDG-208ENST00000544060 ZC3H4Q9UPT8 1303 aaKnown RBP24.45■■□□□ 1.5
TDG-208ENST00000544060 ANXA1P04083 346 aa24.45■■□□□ 1.5
TDG-208ENST00000544060 PDIA6Q15084 440 aa24.45■■□□□ 1.5
TDG-208ENST00000544060 SOGA3Q5TF21 947 aa24.45■■□□□ 1.5
TDG-208ENST00000544060 TIAM2Q8IVF5 1701 aa24.44■■□□□ 1.5
TDG-208ENST00000544060 KRT24Q2M2I5 525 aa24.44■■□□□ 1.5
TDG-208ENST00000544060 PROSER3Q2NL68 480 aa24.44■■□□□ 1.5
TDG-208ENST00000544060 GIGYF2Q6Y7W6 1299 aaKnown RBP24.44■■□□□ 1.5
TDG-208ENST00000544060 CFAP44Q96MT7 982 aa24.44■■□□□ 1.5
TDG-208ENST00000544060 FER1L6Q2WGJ9 1857 aa24.43■■□□□ 1.5
TDG-208ENST00000544060 CCDC88AQ3V6T2 1871 aa24.43■■□□□ 1.5
TDG-208ENST00000544060 UBN2Q6ZU65 1347 aa24.43■■□□□ 1.5
TDG-208ENST00000544060 KLRG2A4D1S0 409 aaPredicted RBP24.43■■□□□ 1.5
TDG-208ENST00000544060 CALD1Q05682 793 aaKnown RBP24.43■■□□□ 1.5
TDG-208ENST00000544060 LRP10Q7Z4F1 713 aa24.43■■□□□ 1.5
TDG-208ENST00000544060 NUTM1Q86Y26 1132 aa24.43■■□□□ 1.5
TDG-208ENST00000544060 IBTKQ9P2D0 1353 aaPredicted RBP24.42■■□□□ 1.5
TDG-208ENST00000544060 PRELPP51888 382 aa24.42■■□□□ 1.5
TDG-208ENST00000544060 ERFEQ4G0M1 354 aa24.42■■□□□ 1.5
TDG-208ENST00000544060 C16orf71Q8IYS4 520 aaPredicted RBP24.42■■□□□ 1.5
TDG-208ENST00000544060 TAOK3Q9H2K8 898 aa24.42■■□□□ 1.5
TDG-208ENST00000544060 TNRC6CQ9HCJ0 1690 aaKnown RBP24.42■■□□□ 1.5
TDG-208ENST00000544060 ABCC12Q96J65 1359 aa24.42■■□□□ 1.5
TDG-208ENST00000544060 AIMP1Q12904 312 aaKnown RBP24.41■■□□□ 1.5
TDG-208ENST00000544060 HDGFL1Q5TGJ6 251 aa24.41■■□□□ 1.5
TDG-208ENST00000544060 ZNF34Q8IZ26 560 aa24.41■■□□□ 1.5
TDG-208ENST00000544060 DDX21Q9NR30 783 aaKnown RBP eCLIP24.41■■□□□ 1.5
TDG-208ENST00000544060 TOMM70O94826 608 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 HOXB7P09629 217 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 PARP10Q53GL7 1025 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 SUSD4Q5VX71 490 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 COPS6Q7L5N1 327 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 PPP1R42Q7Z4L9 355 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 XAGE3Q8WTP9 111 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 MBIPQ9NS73 344 aa24.4■■□□□ 1.5
TDG-208ENST00000544060 LTBP3Q9NS15 1303 aa24.39■■□□□ 1.5
TDG-208ENST00000544060 ANP32CO43423 234 aa24.39■■□□□ 1.49
TDG-208ENST00000544060 ALDH1B1P30837 517 aa24.39■■□□□ 1.49
TDG-208ENST00000544060 CCDC184Q52MB2 194 aa24.39■■□□□ 1.49
TDG-208ENST00000544060 CCDC93Q567U6 631 aa24.39■■□□□ 1.49
TDG-208ENST00000544060 IFT57Q9NWB7 429 aa24.39■■□□□ 1.49
TDG-208ENST00000544060 CHPF2Q9P2E5 772 aa24.39■■□□□ 1.49
TDG-208ENST00000544060 GNAI1P63096 354 aa24.38■■□□□ 1.49
TDG-208ENST00000544060 HSP90AB3PQ58FF7 597 aa24.38■■□□□ 1.49
TDG-208ENST00000544060 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
TDG-208ENST00000544060 ANKRD36CQ5JPF3 1778 aa24.38■■□□□ 1.49
TDG-208ENST00000544060 RIC1Q4ADV7 1423 aa24.37■■□□□ 1.49
TDG-208ENST00000544060 NTSR2O95665 410 aa24.37■■□□□ 1.49
TDG-208ENST00000544060 DUSP27Q5VZP5 1158 aa24.37■■□□□ 1.49
TDG-208ENST00000544060 RRAGCQ9HB90 399 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms