RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 LDHDQ86WU2 507 aa20.94■□□□□ 0.94
CD4-210ENST00000541982 FMNL2Q96PY5 1086 aa20.94■□□□□ 0.94
CD4-210ENST00000541982 CNTNAP1P78357 1384 aa20.93■□□□□ 0.94
CD4-210ENST00000541982 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
CD4-210ENST00000541982 L3MBTL3Q96JM7 780 aaPredicted RBP20.92■□□□□ 0.94
CD4-210ENST00000541982 PRDM10Q9NQV6 1147 aa20.92■□□□□ 0.94
CD4-210ENST00000541982 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
CD4-210ENST00000541982 POTEIP0CG38 1075 aa20.91■□□□□ 0.94
CD4-210ENST00000541982 POTEJP0CG39 1038 aa20.91■□□□□ 0.94
CD4-210ENST00000541982 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
CD4-210ENST00000541982 AIDAQ96BJ3 306 aa20.91■□□□□ 0.94
CD4-210ENST00000541982 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
CD4-210ENST00000541982 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
CD4-210ENST00000541982 A1BGP04217 495 aa20.9■□□□□ 0.94
CD4-210ENST00000541982 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
CD4-210ENST00000541982 TAF1DQ9H5J8 278 aaPredicted RBP20.9■□□□□ 0.94
CD4-210ENST00000541982 TMEM88BA6NKF7 163 aa20.89■□□□□ 0.93
CD4-210ENST00000541982 FOXN1O15353 648 aa20.89■□□□□ 0.93
CD4-210ENST00000541982 CTCFP49711 727 aaPredicted RBP20.89■□□□□ 0.93
CD4-210ENST00000541982 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
CD4-210ENST00000541982 DZIP3Q86Y13 1208 aaKnown RBP20.89■□□□□ 0.93
CD4-210ENST00000541982 BCORQ6W2J9 1755 aa20.89■□□□□ 0.93
CD4-210ENST00000541982 NBPF5PQ86XG9 351 aaPredicted RBP20.88■□□□□ 0.93
CD4-210ENST00000541982 ZNF652Q9Y2D9 606 aa20.88■□□□□ 0.93
CD4-210ENST00000541982 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
CD4-210ENST00000541982 NPR1P16066 1061 aa20.87■□□□□ 0.93
CD4-210ENST00000541982 BTBD11A6QL63 1104 aa20.86■□□□□ 0.93
CD4-210ENST00000541982 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
CD4-210ENST00000541982 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
CD4-210ENST00000541982 C7orf43Q8WVR3 580 aa20.86■□□□□ 0.93
CD4-210ENST00000541982 HACL1Q9UJ83 578 aa20.86■□□□□ 0.93
CD4-210ENST00000541982 VEGFBP49765 207 aa20.85■□□□□ 0.93
CD4-210ENST00000541982 EAPPQ56P03 285 aaPredicted RBP20.85■□□□□ 0.93
CD4-210ENST00000541982 RTKN2Q8IZC4 609 aa20.85■□□□□ 0.93
CD4-210ENST00000541982 CEMIPQ8WUJ3 1361 aa20.85■□□□□ 0.93
CD4-210ENST00000541982 ITGBL1O95965 494 aaPredicted RBP20.84■□□□□ 0.93
CD4-210ENST00000541982 TPTE2Q6XPS3 522 aa20.84■□□□□ 0.93
CD4-210ENST00000541982 PNMA8AQ86V59 439 aaPredicted RBP20.84■□□□□ 0.93
CD4-210ENST00000541982 CLEC11AQ9Y240 323 aa20.84■□□□□ 0.93
CD4-210ENST00000541982 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
CD4-210ENST00000541982 KLRG2A4D1S0 409 aaPredicted RBP20.83■□□□□ 0.93
CD4-210ENST00000541982 RGL2O15211 777 aa20.83■□□□□ 0.93
CD4-210ENST00000541982 EPHX2P34913 555 aa20.82■□□□□ 0.92
CD4-210ENST00000541982 ZNF277Q9NRM2 450 aaPredicted RBP20.82■□□□□ 0.92
CD4-210ENST00000541982 WBP1LQ9NX94 342 aa20.82■□□□□ 0.92
CD4-210ENST00000541982 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
CD4-210ENST00000541982 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
CD4-210ENST00000541982 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
CD4-210ENST00000541982 ALDH1B1P30837 517 aa20.81■□□□□ 0.92
CD4-210ENST00000541982 ZNF541Q9H0D2 1346 aa20.8■□□□□ 0.92
CD4-210ENST00000541982 KCNQ3O43525 872 aa20.8■□□□□ 0.92
CD4-210ENST00000541982 DEFB115Q30KQ5 88 aa20.8■□□□□ 0.92
CD4-210ENST00000541982 RASSF10A6NK89 507 aa20.79■□□□□ 0.92
CD4-210ENST00000541982 CNTROBQ8N137 903 aa20.79■□□□□ 0.92
CD4-210ENST00000541982 NIP7Q9Y221 180 aaKnown RBP eCLIP20.79■□□□□ 0.92
CD4-210ENST00000541982 ADAMTSL1Q8N6G6 1762 aa20.79■□□□□ 0.92
CD4-210ENST00000541982 FZD9O00144 591 aa20.78■□□□□ 0.92
CD4-210ENST00000541982 IARSP41252 1262 aaKnown RBP20.78■□□□□ 0.92
CD4-210ENST00000541982 LBX1P52954 281 aa20.78■□□□□ 0.92
CD4-210ENST00000541982 MAP2K1Q02750 393 aaPredicted RBP20.78■□□□□ 0.92
CD4-210ENST00000541982 GPC2Q8N158 579 aa20.78■□□□□ 0.92
CD4-210ENST00000541982 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
CD4-210ENST00000541982 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.92
CD4-210ENST00000541982 SYNE4Q8N205 404 aa20.77■□□□□ 0.92
CD4-210ENST00000541982 JDP2Q8WYK2 163 aa20.77■□□□□ 0.92
CD4-210ENST00000541982 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.92
CD4-210ENST00000541982 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.91
CD4-210ENST00000541982 PRKAR2BP31323 418 aa20.76■□□□□ 0.91
CD4-210ENST00000541982 CFAP53Q96M91 514 aa20.76■□□□□ 0.91
CD4-210ENST00000541982 MAP1SQ66K74 1059 aaPredicted RBP20.75■□□□□ 0.91
CD4-210ENST00000541982 CC2D2BQ6DHV5 1058 aa20.75■□□□□ 0.91
CD4-210ENST00000541982 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
CD4-210ENST00000541982 PSMD1Q99460 953 aa20.75■□□□□ 0.91
CD4-210ENST00000541982 WDR33Q9C0J8 1336 aaKnown RBP20.75■□□□□ 0.91
CD4-210ENST00000541982 PRAMEF22A3QJZ6 481 aa20.74■□□□□ 0.91
CD4-210ENST00000541982 EIF6P56537 245 aaKnown RBP20.74■□□□□ 0.91
CD4-210ENST00000541982 OLFM4Q6UX06 510 aa20.74■□□□□ 0.91
CD4-210ENST00000541982 RSPH6AQ9H0K4 717 aa20.74■□□□□ 0.91
CD4-210ENST00000541982 ABT1Q9ULW3 272 aaKnown RBP20.74■□□□□ 0.91
CD4-210ENST00000541982 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
CD4-210ENST00000541982 FAM177BA6PVY3 158 aa20.73■□□□□ 0.91
CD4-210ENST00000541982 HSPA8P11142 646 aaKnown RBP20.73■□□□□ 0.91
CD4-210ENST00000541982 LMOD1P29536 600 aaPredicted RBP20.73■□□□□ 0.91
CD4-210ENST00000541982 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
CD4-210ENST00000541982 NYXQ9GZU5 481 aa20.73■□□□□ 0.91
CD4-210ENST00000541982 NBPF26B4DH59 902 aa20.71■□□□□ 0.91
CD4-210ENST00000541982 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
CD4-210ENST00000541982 NBPF10Q6P3W6 841 aaKnown RBP20.71■□□□□ 0.91
CD4-210ENST00000541982 NBPF15Q8N660 670 aa20.71■□□□□ 0.91
CD4-210ENST00000541982 ABHD8Q96I13 439 aa20.71■□□□□ 0.91
CD4-210ENST00000541982 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
CD4-210ENST00000541982 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.9
CD4-210ENST00000541982 ECE1P42892 770 aa20.7■□□□□ 0.9
CD4-210ENST00000541982 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
CD4-210ENST00000541982 MCM10Q7L590 875 aa20.7■□□□□ 0.9
CD4-210ENST00000541982 BEGAINQ9BUH8 593 aa20.7■□□□□ 0.9
CD4-210ENST00000541982 HLFQ16534 295 aa20.69■□□□□ 0.9
CD4-210ENST00000541982 GJA3Q9Y6H8 435 aa20.69■□□□□ 0.9
CD4-210ENST00000541982 RPGRQ92834 1020 aaKnown RBP20.68■□□□□ 0.9
CD4-210ENST00000541982 TRPM7Q96QT4 1865 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms