RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 SERPINB2P05120 415 aa25.99■■□□□ 1.75
RAP1B-223ENST00000541167 CARMIL3Q8ND23 1372 aa25.98■■□□□ 1.75
RAP1B-223ENST00000541167 CLEC4GQ6UXB4 293 aa25.98■■□□□ 1.75
RAP1B-223ENST00000541167 TTLL7Q6ZT98 887 aa25.98■■□□□ 1.75
RAP1B-223ENST00000541167 C8orf58Q8NAV2 365 aa25.98■■□□□ 1.75
RAP1B-223ENST00000541167 MAP3K15Q6ZN16 1313 aa25.97■■□□□ 1.75
RAP1B-223ENST00000541167 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
RAP1B-223ENST00000541167 SETDB2Q96T68 719 aa25.97■■□□□ 1.75
RAP1B-223ENST00000541167 DDX21Q9NR30 783 aaKnown RBP eCLIP25.97■■□□□ 1.75
RAP1B-223ENST00000541167 CHPF2Q9P2E5 772 aa25.97■■□□□ 1.75
RAP1B-223ENST00000541167 PXDNLA1KZ92 1463 aa25.97■■□□□ 1.75
RAP1B-223ENST00000541167 RGL2O15211 777 aa25.96■■□□□ 1.75
RAP1B-223ENST00000541167 LRP10Q7Z4F1 713 aa25.96■■□□□ 1.75
RAP1B-223ENST00000541167 FANCIQ9NVI1 1328 aa25.95■■□□□ 1.75
RAP1B-223ENST00000541167 HLFQ16534 295 aa25.95■■□□□ 1.74
RAP1B-223ENST00000541167 ZBTB3Q9H5J0 574 aa25.95■■□□□ 1.74
RAP1B-223ENST00000541167 ERVV-1B6SEH8 477 aa25.94■■□□□ 1.74
RAP1B-223ENST00000541167 GPR162Q16538 588 aa25.94■■□□□ 1.74
RAP1B-223ENST00000541167 DBF4Q9UBU7 674 aaPredicted RBP25.94■■□□□ 1.74
RAP1B-223ENST00000541167 TGFB2P61812 414 aa25.93■■□□□ 1.74
RAP1B-223ENST00000541167 AIMP1Q12904 312 aaKnown RBP25.93■■□□□ 1.74
RAP1B-223ENST00000541167 TSPYL6Q8N831 410 aa25.93■■□□□ 1.74
RAP1B-223ENST00000541167 NIP7Q9Y221 180 aaKnown RBP eCLIP25.93■■□□□ 1.74
RAP1B-223ENST00000541167 ANKRD36CQ5JPF3 1778 aa25.92■■□□□ 1.74
RAP1B-223ENST00000541167 BRCA1P38398 1863 aaKnown RBP25.92■■□□□ 1.74
RAP1B-223ENST00000541167 NPHP1O15259 732 aa25.92■■□□□ 1.74
RAP1B-223ENST00000541167 COPS6Q7L5N1 327 aa25.92■■□□□ 1.74
RAP1B-223ENST00000541167 XAGE3Q8WTP9 111 aa25.92■■□□□ 1.74
RAP1B-223ENST00000541167 ANKRD31Q8N7Z5 1873 aa25.91■■□□□ 1.74
RAP1B-223ENST00000541167 ZNF521Q96K83 1311 aa25.91■■□□□ 1.74
RAP1B-223ENST00000541167 WWC3Q9ULE0 1092 aa25.91■■□□□ 1.74
RAP1B-223ENST00000541167 ATP10DQ9P241 1426 aa25.9■■□□□ 1.74
RAP1B-223ENST00000541167 A0A0G2JLW4 131 aa25.9■■□□□ 1.74
RAP1B-223ENST00000541167 GOLGA2Q08379 1002 aa25.9■■□□□ 1.74
RAP1B-223ENST00000541167 TWISTNBQ3B726 338 aaPredicted RBP25.9■■□□□ 1.74
RAP1B-223ENST00000541167 CHMP4AQ9BY43 222 aa25.9■■□□□ 1.74
RAP1B-223ENST00000541167 MYH16Q9H6N6 1097 aa25.9■■□□□ 1.74
RAP1B-223ENST00000541167 SPINK5Q9NQ38 1064 aaPredicted RBP25.9■■□□□ 1.74
RAP1B-223ENST00000541167 DPEP1P16444 411 aa25.89■■□□□ 1.74
RAP1B-223ENST00000541167 CCDC30Q5VVM6 783 aa25.89■■□□□ 1.74
RAP1B-223ENST00000541167 PRR5LQ6MZQ0 368 aa25.89■■□□□ 1.74
RAP1B-223ENST00000541167 CNBD1Q8NA66 436 aa25.89■■□□□ 1.74
RAP1B-223ENST00000541167 HYPKQ9NX55 129 aa25.89■■□□□ 1.74
RAP1B-223ENST00000541167 DLEC1Q9Y238 1755 aa25.88■■□□□ 1.73
RAP1B-223ENST00000541167 GIGYF2Q6Y7W6 1299 aaKnown RBP25.88■■□□□ 1.73
RAP1B-223ENST00000541167 NBPF5PQ86XG9 351 aaPredicted RBP25.88■■□□□ 1.73
RAP1B-223ENST00000541167 FAM177BA6PVY3 158 aa25.87■■□□□ 1.73
RAP1B-223ENST00000541167 YBX3P16989 372 aaKnown RBP eCLIP25.87■■□□□ 1.73
RAP1B-223ENST00000541167 ST5P78524 1137 aa25.87■■□□□ 1.73
RAP1B-223ENST00000541167 CCDC24Q8N4L8 307 aa25.87■■□□□ 1.73
RAP1B-223ENST00000541167 ARFGEF2Q9Y6D5 1785 aa25.87■■□□□ 1.73
RAP1B-223ENST00000541167 GPTP24298 496 aa25.86■■□□□ 1.73
RAP1B-223ENST00000541167 CHRNA5P30532 468 aa25.86■■□□□ 1.73
RAP1B-223ENST00000541167 EXOSC9Q06265 439 aaKnown RBP25.86■■□□□ 1.73
RAP1B-223ENST00000541167 COL11A2P13942 1736 aaPredicted RBP25.85■■□□□ 1.73
RAP1B-223ENST00000541167 CHD4Q14839 1912 aa25.84■■□□□ 1.73
RAP1B-223ENST00000541167 TCERG1O14776 1098 aaKnown RBP25.83■■□□□ 1.73
RAP1B-223ENST00000541167 HSP90AB3PQ58FF7 597 aa25.83■■□□□ 1.73
RAP1B-223ENST00000541167 TPTE2Q6XPS3 522 aa25.83■■□□□ 1.73
RAP1B-223ENST00000541167 STK31Q9BXU1 1019 aa25.83■■□□□ 1.73
RAP1B-223ENST00000541167 CACNA1FO60840 1977 aa25.83■■□□□ 1.73
RAP1B-223ENST00000541167 UBN2Q6ZU65 1347 aa25.83■■□□□ 1.73
RAP1B-223ENST00000541167 ZNF34Q8IZ26 560 aa25.82■■□□□ 1.72
RAP1B-223ENST00000541167 PLBD2Q8NHP8 589 aa25.82■■□□□ 1.72
RAP1B-223ENST00000541167 BRIP1Q9BX63 1249 aa25.82■■□□□ 1.72
RAP1B-223ENST00000541167 PHAXQ9H814 394 aaKnown RBP25.82■■□□□ 1.72
RAP1B-223ENST00000541167 ARFGEF1Q9Y6D6 1849 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 GRIN3BO60391 1043 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 KCNA3P22001 575 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 GTF2E1P29083 439 aaPredicted RBP25.81■■□□□ 1.72
RAP1B-223ENST00000541167 PDE6BP35913 854 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 ANKRD13DQ6ZTN6 518 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 C2CD5Q86YS7 1000 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 NYXQ9GZU5 481 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 PIM2Q9P1W9 311 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 BCS1LQ9Y276 419 aa25.81■■□□□ 1.72
RAP1B-223ENST00000541167 IBTKQ9P2D0 1353 aaPredicted RBP25.8■■□□□ 1.72
RAP1B-223ENST00000541167 CACNA1SQ13698 1873 aa25.79■■□□□ 1.72
RAP1B-223ENST00000541167 E9PSI1 815 aa25.79■■□□□ 1.72
RAP1B-223ENST00000541167 H0YIN7 160 aa25.79■■□□□ 1.72
RAP1B-223ENST00000541167 VAMP4O75379 141 aa25.79■■□□□ 1.72
RAP1B-223ENST00000541167 PARP10Q53GL7 1025 aa25.79■■□□□ 1.72
RAP1B-223ENST00000541167 SUSD4Q5VX71 490 aa25.79■■□□□ 1.72
RAP1B-223ENST00000541167 TNRC6CQ9HCJ0 1690 aaKnown RBP25.78■■□□□ 1.72
RAP1B-223ENST00000541167 TCIRG1Q13488 830 aa25.78■■□□□ 1.72
RAP1B-223ENST00000541167 PDZRN3Q9UPQ7 1066 aa25.78■■□□□ 1.72
RAP1B-223ENST00000541167 PPP1R42Q7Z4L9 355 aa25.77■■□□□ 1.72
RAP1B-223ENST00000541167 RIC3Q7Z5B4 369 aa25.77■■□□□ 1.72
RAP1B-223ENST00000541167 NUTM1Q86Y26 1132 aa25.77■■□□□ 1.72
RAP1B-223ENST00000541167 ABCC12Q96J65 1359 aa25.77■■□□□ 1.72
RAP1B-223ENST00000541167 SLFN5Q08AF3 891 aa25.76■■□□□ 1.71
RAP1B-223ENST00000541167 DALRD3Q5D0E6 543 aaKnown RBP25.76■■□□□ 1.71
RAP1B-223ENST00000541167 ZNF784Q8NCA9 323 aaPredicted RBP25.76■■□□□ 1.71
RAP1B-223ENST00000541167 NTSR2O95665 410 aa25.75■■□□□ 1.71
RAP1B-223ENST00000541167 DDX58O95786 925 aaKnown RBP25.75■■□□□ 1.71
RAP1B-223ENST00000541167 SLC4A2P04920 1241 aa25.75■■□□□ 1.71
RAP1B-223ENST00000541167 ERFEQ4G0M1 354 aa25.75■■□□□ 1.71
RAP1B-223ENST00000541167 NLRP10Q86W26 655 aa25.74■■□□□ 1.71
RAP1B-223ENST00000541167 ZNF622Q969S3 477 aaKnown RBP eCLIP25.74■■□□□ 1.71
RAP1B-223ENST00000541167 CDCA7LQ96GN5 454 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms