RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TSC1Q92574 1164 aa17■□□□□ 0.31
INO80E-203ENST00000540562 PPP1R9BQ96SB3 815 aa17■□□□□ 0.31
INO80E-203ENST00000540562 NLRP2Q9NX02 1062 aa17■□□□□ 0.31
INO80E-203ENST00000540562 TSPY26PQ9H489 355 aa17■□□□□ 0.31
INO80E-203ENST00000540562 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
INO80E-203ENST00000540562 PTCD1O75127 700 aaKnown RBP17■□□□□ 0.31
INO80E-203ENST00000540562 LSG1Q9H089 658 aaKnown RBP17■□□□□ 0.31
INO80E-203ENST00000540562 BICC1Q9H694 974 aaKnown RBP17■□□□□ 0.31
INO80E-203ENST00000540562 ZNF330Q9Y3S2 320 aaPredicted RBP17■□□□□ 0.31
INO80E-203ENST00000540562 TCHHQ07283 1943 aa16.99■□□□□ 0.31
INO80E-203ENST00000540562 GJB2P29033 226 aa16.99■□□□□ 0.31
INO80E-203ENST00000540562 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
INO80E-203ENST00000540562 SUCLG2Q96I99 432 aa16.99■□□□□ 0.31
INO80E-203ENST00000540562 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
INO80E-203ENST00000540562 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
INO80E-203ENST00000540562 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
INO80E-203ENST00000540562 RAD50Q92878 1312 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 UBR1Q8IWV7 1749 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 IP6K1Q92551 441 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 TTC12Q9H892 705 aaPredicted RBP16.98■□□□□ 0.31
INO80E-203ENST00000540562 CUL4AQ13619 759 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 VSIG10Q8N0Z9 540 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 FSD1Q9BTV5 496 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.98■□□□□ 0.31
INO80E-203ENST00000540562 ADCY9O60503 1353 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 STX6O43752 255 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 GCP02774 474 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 EAF2Q96CJ1 260 aaPredicted RBP16.98■□□□□ 0.31
INO80E-203ENST00000540562 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
INO80E-203ENST00000540562 TFIP11Q9UBB9 837 aaKnown RBP16.98■□□□□ 0.31
INO80E-203ENST00000540562 DIP2AQ14689 1571 aa16.97■□□□□ 0.31
INO80E-203ENST00000540562 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
INO80E-203ENST00000540562 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
INO80E-203ENST00000540562 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
INO80E-203ENST00000540562 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
INO80E-203ENST00000540562 WDR33Q9C0J8 1336 aaKnown RBP16.97■□□□□ 0.31
INO80E-203ENST00000540562 MCM2P49736 904 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 MBD3O95983 291 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 POLA2Q14181 598 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
INO80E-203ENST00000540562 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 MYD88Q99836 296 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
INO80E-203ENST00000540562 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
INO80E-203ENST00000540562 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
INO80E-203ENST00000540562 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 RAB11FIP3O75154 756 aa16.95■□□□□ 0.3
INO80E-203ENST00000540562 G3BP1Q13283 466 aaKnown RBP eCLIP16.95■□□□□ 0.3
INO80E-203ENST00000540562 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
INO80E-203ENST00000540562 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
INO80E-203ENST00000540562 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
INO80E-203ENST00000540562 ME3Q16798 604 aa16.95■□□□□ 0.3
INO80E-203ENST00000540562 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
INO80E-203ENST00000540562 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
INO80E-203ENST00000540562 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
INO80E-203ENST00000540562 SEC62Q99442 399 aaKnown RBP16.94■□□□□ 0.3
INO80E-203ENST00000540562 SASH1O94885 1247 aa16.94■□□□□ 0.3
INO80E-203ENST00000540562 ANAPC15P60006 121 aa16.94■□□□□ 0.3
INO80E-203ENST00000540562 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
INO80E-203ENST00000540562 COPS6Q7L5N1 327 aa16.93■□□□□ 0.3
INO80E-203ENST00000540562 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
INO80E-203ENST00000540562 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
INO80E-203ENST00000540562 TPCN1Q9ULQ1 816 aa16.93■□□□□ 0.3
INO80E-203ENST00000540562 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
INO80E-203ENST00000540562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
INO80E-203ENST00000540562 PXDNQ92626 1479 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 AKAP4Q5JQC9 854 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 GRM8O00222 908 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 F13A1P00488 732 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
INO80E-203ENST00000540562 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 UQCRHLA0A096LP55 91 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 UQCRHP07919 91 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
INO80E-203ENST00000540562 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
INO80E-203ENST00000540562 TTC14Q96N46 770 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
INO80E-203ENST00000540562 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
INO80E-203ENST00000540562 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
INO80E-203ENST00000540562 A0A087WWV3 80 aa16.9■□□□□ 0.3
INO80E-203ENST00000540562 ADCY5O95622 1261 aa16.9■□□□□ 0.3
INO80E-203ENST00000540562 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
INO80E-203ENST00000540562 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
INO80E-203ENST00000540562 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
INO80E-203ENST00000540562 KDM4AO75164 1064 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms