RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 CNKSR1Q969H4 720 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 ZNF496Q96IT1 587 aaPredicted RBP10.95□□□□□ -0.66
LRP6-204ENST00000540415 HACL1Q9UJ83 578 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
LRP6-204ENST00000540415 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
LRP6-204ENST00000540415 A0A087WZG4 1122 aa10.94□□□□□ -0.66
LRP6-204ENST00000540415 A1BGP04217 495 aa10.94□□□□□ -0.66
LRP6-204ENST00000540415 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
LRP6-204ENST00000540415 GRM1Q13255 1194 aa10.94□□□□□ -0.66
LRP6-204ENST00000540415 MASTLQ96GX5 879 aa10.94□□□□□ -0.66
LRP6-204ENST00000540415 ABT1Q9ULW3 272 aaKnown RBP10.94□□□□□ -0.66
LRP6-204ENST00000540415 PDZRN3Q9UPQ7 1066 aa10.94□□□□□ -0.66
LRP6-204ENST00000540415 DICER1Q9UPY3 1922 aaKnown RBP10.94□□□□□ -0.66
LRP6-204ENST00000540415 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
LRP6-204ENST00000540415 SCN7AQ01118 1682 aa10.93□□□□□ -0.66
LRP6-204ENST00000540415 STARD3NLO95772 234 aa10.93□□□□□ -0.66
LRP6-204ENST00000540415 RGS19P49795 217 aa10.93□□□□□ -0.66
LRP6-204ENST00000540415 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
LRP6-204ENST00000540415 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
LRP6-204ENST00000540415 NPHP1O15259 732 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 ST5P78524 1137 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 MAP2K1Q02750 393 aaPredicted RBP10.92□□□□□ -0.66
LRP6-204ENST00000540415 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
LRP6-204ENST00000540415 CCDC93Q567U6 631 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
LRP6-204ENST00000540415 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 CAPNS2Q96L46 248 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 SETDB2Q96T68 719 aa10.92□□□□□ -0.66
LRP6-204ENST00000540415 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
LRP6-204ENST00000540415 HEG1Q9ULI3 1381 aa10.91□□□□□ -0.66
LRP6-204ENST00000540415 TRAF5O00463 557 aa10.91□□□□□ -0.66
LRP6-204ENST00000540415 KCNQ3O43525 872 aa10.91□□□□□ -0.66
LRP6-204ENST00000540415 AOC2O75106 756 aa10.91□□□□□ -0.66
LRP6-204ENST00000540415 SOGA3Q5TF21 947 aa10.91□□□□□ -0.66
LRP6-204ENST00000540415 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
LRP6-204ENST00000540415 COL4A5P29400 1685 aa10.9□□□□□ -0.66
LRP6-204ENST00000540415 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
LRP6-204ENST00000540415 FZD9O00144 591 aa10.9□□□□□ -0.66
LRP6-204ENST00000540415 IL6STP40189 918 aaPredicted RBP10.9□□□□□ -0.66
LRP6-204ENST00000540415 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
LRP6-204ENST00000540415 SYNE4Q8N205 404 aa10.9□□□□□ -0.66
LRP6-204ENST00000540415 IL17REQ8NFR9 667 aa10.9□□□□□ -0.66
LRP6-204ENST00000540415 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.67
LRP6-204ENST00000540415 SCN4AP35499 1836 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 FAM177BA6PVY3 158 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 NPR1P16066 1061 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 IARSP41252 1262 aaKnown RBP10.89□□□□□ -0.67
LRP6-204ENST00000540415 CST9Q5W186 159 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
LRP6-204ENST00000540415 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
LRP6-204ENST00000540415 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
LRP6-204ENST00000540415 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
LRP6-204ENST00000540415 MCOLN1Q9GZU1 580 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
LRP6-204ENST00000540415 KLRG2A4D1S0 409 aaPredicted RBP10.88□□□□□ -0.67
LRP6-204ENST00000540415 EPS15P42566 896 aa10.88□□□□□ -0.67
LRP6-204ENST00000540415 CACNA1SQ13698 1873 aa10.88□□□□□ -0.67
LRP6-204ENST00000540415 LTBP1Q14766 1721 aa10.88□□□□□ -0.67
LRP6-204ENST00000540415 GPC2Q8N158 579 aa10.88□□□□□ -0.67
LRP6-204ENST00000540415 THSD7BQ9C0I4 1608 aa10.87□□□□□ -0.67
LRP6-204ENST00000540415 SNED1Q8TER0 1413 aa10.87□□□□□ -0.67
LRP6-204ENST00000540415 SCNN1DP51172 638 aa10.87□□□□□ -0.67
LRP6-204ENST00000540415 BEGAINQ9BUH8 593 aa10.87□□□□□ -0.67
LRP6-204ENST00000540415 USP16Q9Y5T5 823 aa10.87□□□□□ -0.67
LRP6-204ENST00000540415 ARFGEF2Q9Y6D5 1785 aa10.86□□□□□ -0.67
LRP6-204ENST00000540415 HSPA5P11021 654 aaKnown RBP10.86□□□□□ -0.67
LRP6-204ENST00000540415 TEFQ10587 303 aa10.86□□□□□ -0.67
LRP6-204ENST00000540415 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
LRP6-204ENST00000540415 FMNL2Q96PY5 1086 aa10.86□□□□□ -0.67
LRP6-204ENST00000540415 TEX13AQ9BXU3 409 aaPredicted RBP10.86□□□□□ -0.67
LRP6-204ENST00000540415 TLL2Q9Y6L7 1015 aa10.86□□□□□ -0.67
LRP6-204ENST00000540415 ECE1P42892 770 aa10.85□□□□□ -0.67
LRP6-204ENST00000540415 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
LRP6-204ENST00000540415 ZIC5Q96T25 663 aa10.85□□□□□ -0.67
LRP6-204ENST00000540415 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 HLFQ16534 295 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
LRP6-204ENST00000540415 NPM2Q86SE8 214 aaKnown RBP10.84□□□□□ -0.67
LRP6-204ENST00000540415 NBPF15Q8N660 670 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 JDP2Q8WYK2 163 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 NIP7Q9Y221 180 aaKnown RBP eCLIP10.84□□□□□ -0.67
LRP6-204ENST00000540415 KNSTRNQ9Y448 316 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 ABCC12Q96J65 1359 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 BCORQ6W2J9 1755 aa10.84□□□□□ -0.67
LRP6-204ENST00000540415 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
LRP6-204ENST00000540415 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
LRP6-204ENST00000540415 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
LRP6-204ENST00000540415 LMOD1P29536 600 aaPredicted RBP10.83□□□□□ -0.68
LRP6-204ENST00000540415 EIF6P56537 245 aaKnown RBP10.83□□□□□ -0.68
LRP6-204ENST00000540415 DGKZQ13574 1117 aa10.83□□□□□ -0.68
LRP6-204ENST00000540415 CLEC4GQ6UXB4 293 aa10.83□□□□□ -0.68
LRP6-204ENST00000540415 NUTM1Q86Y26 1132 aa10.83□□□□□ -0.68
LRP6-204ENST00000540415 PSMD1Q99460 953 aa10.83□□□□□ -0.68
LRP6-204ENST00000540415 BTBD11A6QL63 1104 aa10.82□□□□□ -0.68
LRP6-204ENST00000540415 CELF2O95319 508 aaKnown RBP10.82□□□□□ -0.68
LRP6-204ENST00000540415 MAP2K2P36507 400 aa10.82□□□□□ -0.68
LRP6-204ENST00000540415 SOX10P56693 466 aa10.82□□□□□ -0.68
LRP6-204ENST00000540415 CIAPIN1Q6FI81 312 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms