RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
CPSF7-219ENST00000539952 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-219ENST00000539952 VEGFBP49765 207 aa8.08□□□□□ -1.12
CPSF7-219ENST00000539952 EIF5P55010 431 aaKnown RBP8.08□□□□□ -1.12
CPSF7-219ENST00000539952 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
CPSF7-219ENST00000539952 L3MBTL3Q96JM7 780 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-219ENST00000539952 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
CPSF7-219ENST00000539952 PASKQ96RG2 1323 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 CANXP27824 592 aaKnown RBP8.07□□□□□ -1.12
CPSF7-219ENST00000539952 LBX1P52954 281 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 SLC39A6Q13433 755 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 PNMA8AQ86V59 439 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-219ENST00000539952 MORC1Q86VD1 984 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 MASTLQ96GX5 879 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 SETDB2Q96T68 719 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 TAF1DQ9H5J8 278 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-219ENST00000539952 TIMELESSQ9UNS1 1208 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 ZBTB1Q9Y2K1 713 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 COL15A1P39059 1388 aa8.07□□□□□ -1.12
CPSF7-219ENST00000539952 NPHP1O15259 732 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 POTEIP0CG38 1075 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 RGS19P49795 217 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-219ENST00000539952 STYK1Q6J9G0 422 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 ABHD8Q96I13 439 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 HACL1Q9UJ83 578 aa8.06□□□□□ -1.12
CPSF7-219ENST00000539952 RASSF10A6NK89 507 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 SRGNP10124 158 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 IL13P35225 146 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 IL6STP40189 918 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-219ENST00000539952 ST5P78524 1137 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 TBC1D9BQ66K14 1250 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 PRR5LQ6MZQ0 368 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 RTKN2Q8IZC4 609 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 TTC5Q8N0Z6 440 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 CNTROBQ8N137 903 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 POLR3GLQ9BT43 218 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 BEGAINQ9BUH8 593 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 PANK3Q9H999 370 aa8.05□□□□□ -1.12
CPSF7-219ENST00000539952 WDR33Q9C0J8 1336 aaKnown RBP8.04□□□□□ -1.12
CPSF7-219ENST00000539952 COL5A3P25940 1745 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-219ENST00000539952 HSPA8P11142 646 aaKnown RBP8.04□□□□□ -1.12
CPSF7-219ENST00000539952 EAPPQ56P03 285 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-219ENST00000539952 CNBD1Q8NA66 436 aa8.04□□□□□ -1.12
CPSF7-219ENST00000539952 RNF25Q96BH1 459 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-219ENST00000539952 TBC1D2BQ9UPU7 963 aa8.04□□□□□ -1.12
CPSF7-219ENST00000539952 PCNTO95613 3336 aa8.04□□□□□ -1.12
CPSF7-219ENST00000539952 ALDH1B1P30837 517 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 EPHX2P34913 555 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 ECE1P42892 770 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 FKBP4Q02790 459 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPSF7-219ENST00000539952 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 CCDC93Q567U6 631 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
CPSF7-219ENST00000539952 CLEC4GQ6UXB4 293 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 TPTE2Q6XPS3 522 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 KNSTRNQ9Y448 316 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 KIF20BQ96Q89 1820 aa8.03□□□□□ -1.12
CPSF7-219ENST00000539952 CARMIL3Q8ND23 1372 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 KLRG2A4D1S0 409 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-219ENST00000539952 CCDC85CA6NKD9 419 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 FZD9O00144 591 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 PRKAR2AP13861 404 aaKnown RBP8.02□□□□□ -1.13
CPSF7-219ENST00000539952 NPR1P16066 1061 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 MAP2K2P36507 400 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 MTHFSDQ2M296 383 aaKnown RBP8.02□□□□□ -1.13
CPSF7-219ENST00000539952 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 ZNF790Q6PG37 636 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 GPC2Q8N158 579 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
CPSF7-219ENST00000539952 ABT1Q9ULW3 272 aaKnown RBP8.02□□□□□ -1.13
CPSF7-219ENST00000539952 CCDC88AQ3V6T2 1871 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 FXR2P51116 673 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPSF7-219ENST00000539952 TEFQ10587 303 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 GRIPAP1Q4V328 841 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-219ENST00000539952 CC2D2BQ6DHV5 1058 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 PIP4P2Q8N4L2 257 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 ZNF496Q96IT1 587 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-219ENST00000539952 GPR101Q96P66 508 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-219ENST00000539952 FMNL2Q96PY5 1086 aa8.01□□□□□ -1.13
CPSF7-219ENST00000539952 DDX21Q9NR30 783 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPSF7-219ENST00000539952 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-219ENST00000539952 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 CAMTA2O94983 1202 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 HMOX1P09601 288 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 IARSP41252 1262 aaKnown RBP8□□□□□ -1.13
CPSF7-219ENST00000539952 EIF6P56537 245 aaKnown RBP8□□□□□ -1.13
CPSF7-219ENST00000539952 CHRDL2Q6WN34 429 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 NBPF5PQ86XG9 351 aaPredicted RBP8□□□□□ -1.13
CPSF7-219ENST00000539952 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
CPSF7-219ENST00000539952 ZNF652Q9Y2D9 606 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 NRXN2Q9P2S2 1712 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 ANKRD26Q9UPS8 1709 aa8□□□□□ -1.13
CPSF7-219ENST00000539952 HEG1Q9ULI3 1381 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms