RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.05
VTN-202ENST00000539746 CWC25Q9NXE8 425 aaPredicted RBP14.71□□□□□ -0.05
VTN-202ENST00000539746 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
VTN-202ENST00000539746 C5P01031 1676 aa14.71□□□□□ -0.06
VTN-202ENST00000539746 GRM8O00222 908 aa14.7□□□□□ -0.06
VTN-202ENST00000539746 A1BGP04217 495 aa14.7□□□□□ -0.06
VTN-202ENST00000539746 G2E3Q7L622 706 aa14.7□□□□□ -0.06
VTN-202ENST00000539746 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
VTN-202ENST00000539746 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
VTN-202ENST00000539746 ADCY9O60503 1353 aa14.7□□□□□ -0.06
VTN-202ENST00000539746 COL15A1P39059 1388 aa14.7□□□□□ -0.06
VTN-202ENST00000539746 N4BP2Q86UW6 1770 aaPredicted RBP14.7□□□□□ -0.06
VTN-202ENST00000539746 KCNQ2O43526 872 aa14.69□□□□□ -0.06
VTN-202ENST00000539746 ZPR1O75312 459 aa14.69□□□□□ -0.06
VTN-202ENST00000539746 EIF5P55010 431 aaKnown RBP14.69□□□□□ -0.06
VTN-202ENST00000539746 GIGYF2Q6Y7W6 1299 aaKnown RBP14.69□□□□□ -0.06
VTN-202ENST00000539746 ARXQ96QS3 562 aa14.69□□□□□ -0.06
VTN-202ENST00000539746 PRAMEF22A3QJZ6 481 aa14.68□□□□□ -0.06
VTN-202ENST00000539746 F6X3S4 739 aa14.68□□□□□ -0.06
VTN-202ENST00000539746 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
VTN-202ENST00000539746 TCIRG1Q13488 830 aa14.68□□□□□ -0.06
VTN-202ENST00000539746 PPP1R42Q7Z4L9 355 aa14.68□□□□□ -0.06
VTN-202ENST00000539746 UTYO14607 1347 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 NEURL1BA8MQ27 555 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 NBPF26B4DH59 902 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 SSFA2P28290 1259 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 GCKRQ14397 625 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 NBPF14Q5TI25 921 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 B4GALNT3Q6L9W6 998 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 NBPF10Q6P3W6 841 aaKnown RBP14.67□□□□□ -0.06
VTN-202ENST00000539746 ERC1Q8IUD2 1116 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 NBPF15Q8N660 670 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 ANKRD44Q8N8A2 993 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 MYD88Q99836 296 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 NYXQ9GZU5 481 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
VTN-202ENST00000539746 BTAF1O14981 1849 aa14.66□□□□□ -0.06
VTN-202ENST00000539746 TRIM37O94972 964 aa14.66□□□□□ -0.06
VTN-202ENST00000539746 BAG6P46379 1132 aa14.66□□□□□ -0.06
VTN-202ENST00000539746 LRP10Q7Z4F1 713 aa14.66□□□□□ -0.06
VTN-202ENST00000539746 ZBTB1Q9Y2K1 713 aa14.66□□□□□ -0.06
VTN-202ENST00000539746 RGPD3A6NKT7 1758 aaPredicted RBP14.65□□□□□ -0.06
VTN-202ENST00000539746 RGPD4Q7Z3J3 1758 aa14.65□□□□□ -0.06
VTN-202ENST00000539746 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
VTN-202ENST00000539746 APBA3O96018 575 aa14.65□□□□□ -0.06
VTN-202ENST00000539746 RFC4P35249 363 aa14.65□□□□□ -0.06
VTN-202ENST00000539746 TRAPPC3LQ5T215 181 aa14.65□□□□□ -0.06
VTN-202ENST00000539746 TJP1Q07157 1748 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 GNPATO15228 680 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 ANXA1P04083 346 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 MTX1Q13505 466 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 INTS5Q6P9B9 1019 aaKnown RBP14.64□□□□□ -0.07
VTN-202ENST00000539746 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 ZBTB3Q9H5J0 574 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 RREB1Q92766 1687 aa14.64□□□□□ -0.07
VTN-202ENST00000539746 PCCAP05165 728 aaPredicted RBP14.63□□□□□ -0.07
VTN-202ENST00000539746 ATP8B2P98198 1209 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 ZBTB38Q8NAP3 1195 aaPredicted RBP14.63□□□□□ -0.07
VTN-202ENST00000539746 MEIS3Q99687 375 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 NARFQ9UHQ1 456 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 SBF2Q86WG5 1849 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 LY75O60449 1722 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 CDHR2Q9BYE9 1310 aa14.63□□□□□ -0.07
VTN-202ENST00000539746 ITPK1Q13572 414 aa14.62□□□□□ -0.07
VTN-202ENST00000539746 CEP85Q6P2H3 762 aa14.62□□□□□ -0.07
VTN-202ENST00000539746 POTEAQ6S8J7 498 aa14.62□□□□□ -0.07
VTN-202ENST00000539746 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
VTN-202ENST00000539746 ISCA1Q9BUE6 129 aa14.62□□□□□ -0.07
VTN-202ENST00000539746 KDM2BQ8NHM5 1336 aa14.62□□□□□ -0.07
VTN-202ENST00000539746 TXNRD1Q16881 649 aa14.61□□□□□ -0.07
VTN-202ENST00000539746 SMC5Q8IY18 1101 aa14.61□□□□□ -0.07
VTN-202ENST00000539746 LINC00116Q8NCU8 138 aa14.61□□□□□ -0.07
VTN-202ENST00000539746 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
VTN-202ENST00000539746 NPHP1O15259 732 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 SRGAP3O43295 1099 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 IGKV5-2P06315 115 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 GTF2E1P29083 439 aaPredicted RBP14.6□□□□□ -0.07
VTN-202ENST00000539746 TTLL7Q6ZT98 887 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 SETDB2Q96T68 719 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 UTP14AQ9BVJ6 771 aaKnown RBP14.6□□□□□ -0.07
VTN-202ENST00000539746 DCTPP1Q9H773 170 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 RGS17Q9UGC6 210 aaPredicted RBP14.6□□□□□ -0.07
VTN-202ENST00000539746 PCDHB15Q9Y5E8 787 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
VTN-202ENST00000539746 SH3TC1Q8TE82 1336 aa14.6□□□□□ -0.07
VTN-202ENST00000539746 H7C1W4 665 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
VTN-202ENST00000539746 CWF19L2Q2TBE0 894 aaKnown RBP14.59□□□□□ -0.07
VTN-202ENST00000539746 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 SSH3Q8TE77 659 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 PLA2G12BQ9BX93 195 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
VTN-202ENST00000539746 TNNQ9UQP3 1299 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 ARFGEF2Q9Y6D5 1785 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
VTN-202ENST00000539746 CAMTA2O94983 1202 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 G3BP1Q13283 466 aaKnown RBP eCLIP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms