RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 SPC24Q8NBT2 197 aa14.32□□□□□ -0.12
NEK6-212ENST00000539416 LTV1Q96GA3 475 aaPredicted RBP14.32□□□□□ -0.12
NEK6-212ENST00000539416 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
NEK6-212ENST00000539416 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
NEK6-212ENST00000539416 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
NEK6-212ENST00000539416 FAM208AQ9UK61 1670 aaKnown RBP14.32□□□□□ -0.12
NEK6-212ENST00000539416 NFE2L2Q16236 605 aa14.31□□□□□ -0.12
NEK6-212ENST00000539416 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
NEK6-212ENST00000539416 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
NEK6-212ENST00000539416 IL16Q14005 1332 aa14.31□□□□□ -0.12
NEK6-212ENST00000539416 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
NEK6-212ENST00000539416 TERF2Q15554 542 aa14.3□□□□□ -0.12
NEK6-212ENST00000539416 ERBB3P21860 1342 aa14.3□□□□□ -0.12
NEK6-212ENST00000539416 TCHHQ07283 1943 aa14.3□□□□□ -0.12
NEK6-212ENST00000539416 CHRNA2Q15822 529 aa14.3□□□□□ -0.12
NEK6-212ENST00000539416 PRDM11Q9NQV5 511 aa14.3□□□□□ -0.12
NEK6-212ENST00000539416 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
NEK6-212ENST00000539416 COL14A1Q05707 1796 aaKnown RBP14.29□□□□□ -0.12
NEK6-212ENST00000539416 CCDC183Q5T5S1 534 aa14.29□□□□□ -0.12
NEK6-212ENST00000539416 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
NEK6-212ENST00000539416 CUL4AQ13619 759 aa14.29□□□□□ -0.12
NEK6-212ENST00000539416 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
NEK6-212ENST00000539416 FAM83GA6ND36 823 aa14.28□□□□□ -0.12
NEK6-212ENST00000539416 CAPN2P17655 700 aa14.28□□□□□ -0.12
NEK6-212ENST00000539416 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
NEK6-212ENST00000539416 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
NEK6-212ENST00000539416 TSPYL6Q8N831 410 aa14.28□□□□□ -0.12
NEK6-212ENST00000539416 KIF18AQ8NI77 898 aa14.28□□□□□ -0.12
NEK6-212ENST00000539416 ERICH4A6NGS2 130 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 APBB1O00213 710 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
NEK6-212ENST00000539416 MX1P20591 662 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 TIGD1Q96MW7 591 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 JCADQ9P266 1359 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 REC8O95072 547 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.13
NEK6-212ENST00000539416 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.13
NEK6-212ENST00000539416 COL5A2P05997 1499 aaPredicted RBP14.26□□□□□ -0.13
NEK6-212ENST00000539416 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 VAMP4O75379 141 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 PTGS1P23219 599 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 C16orf45Q96MC5 204 aaPredicted RBP14.26□□□□□ -0.13
NEK6-212ENST00000539416 CNPY2Q9Y2B0 182 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 DLG5Q8TDM6 1919 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 ERC2O15083 957 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 CASC1Q6TDU7 716 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 FUCA2Q9BTY2 467 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
NEK6-212ENST00000539416 ABCC4O15439 1325 aa14.25□□□□□ -0.13
NEK6-212ENST00000539416 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
NEK6-212ENST00000539416 SYCP1Q15431 976 aa14.25□□□□□ -0.13
NEK6-212ENST00000539416 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
NEK6-212ENST00000539416 PALD1Q9ULE6 856 aa14.25□□□□□ -0.13
NEK6-212ENST00000539416 SMTNL1A8MU46 457 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 LRMPQ12912 555 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
NEK6-212ENST00000539416 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 TRERF1Q96PN7 1200 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 DNAJC2Q99543 621 aaKnown RBP14.24□□□□□ -0.13
NEK6-212ENST00000539416 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 ST7Q9NRC1 585 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 THUMPD2Q9BTF0 503 aaKnown RBP14.24□□□□□ -0.13
NEK6-212ENST00000539416 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
NEK6-212ENST00000539416 TULP2O00295 520 aa14.23□□□□□ -0.13
NEK6-212ENST00000539416 HTATSF1O43719 755 aaKnown RBP14.23□□□□□ -0.13
NEK6-212ENST00000539416 SLC20A2Q08357 652 aa14.23□□□□□ -0.13
NEK6-212ENST00000539416 KRT222Q8N1A0 295 aa14.23□□□□□ -0.13
NEK6-212ENST00000539416 TPM3P06753 285 aa14.23□□□□□ -0.13
NEK6-212ENST00000539416 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
NEK6-212ENST00000539416 TNNT1P13805 278 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 KMT5BQ4FZB7 885 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 AMOTQ4VCS5 1084 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 PLEKHO1Q53GL0 409 aaPredicted RBP14.22□□□□□ -0.13
NEK6-212ENST00000539416 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 CERS3Q8IU89 383 aa14.22□□□□□ -0.13
NEK6-212ENST00000539416 WDR33Q9C0J8 1336 aaKnown RBP14.21□□□□□ -0.13
NEK6-212ENST00000539416 MCM2P49736 904 aa14.21□□□□□ -0.13
NEK6-212ENST00000539416 EVA1CP58658 441 aa14.21□□□□□ -0.13
NEK6-212ENST00000539416 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.13
NEK6-212ENST00000539416 PLCH1Q4KWH8 1693 aa14.21□□□□□ -0.13
NEK6-212ENST00000539416 TRIM6-TRIM34B2RNG4 842 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 HSPA1LP34931 641 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 CCDC186Q7Z3E2 898 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.14
NEK6-212ENST00000539416 IFT57Q9NWB7 429 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 BTG4Q9NY30 223 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.21□□□□□ -0.14
NEK6-212ENST00000539416 NRBP1Q9UHY1 535 aa14.21□□□□□ -0.14
NEK6-212ENST00000539416 V9GYY5 206 aaPredicted RBP14.21□□□□□ -0.14
NEK6-212ENST00000539416 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
NEK6-212ENST00000539416 CCDC112Q8NEF3 446 aa14.2□□□□□ -0.14
NEK6-212ENST00000539416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.2□□□□□ -0.144e-6■■□□□ 11.9
NEK6-212ENST00000539416 UBE2HP62256 183 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms