RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
CTCFL-212ENST00000539382 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
CTCFL-212ENST00000539382 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
CTCFL-212ENST00000539382 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
CTCFL-212ENST00000539382 LINS1Q8NG48 757 aa13.88□□□□□ -0.19
CTCFL-212ENST00000539382 KCNQ2O43526 872 aa13.87□□□□□ -0.19
CTCFL-212ENST00000539382 C16orf71Q8IYS4 520 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-212ENST00000539382 METTL22Q9BUU2 404 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-212ENST00000539382 APBB1O00213 710 aa13.87□□□□□ -0.19
CTCFL-212ENST00000539382 ALDH1L1O75891 902 aa13.87□□□□□ -0.19
CTCFL-212ENST00000539382 MYD88Q99836 296 aa13.87□□□□□ -0.19
CTCFL-212ENST00000539382 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
CTCFL-212ENST00000539382 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
CTCFL-212ENST00000539382 SMARCA5O60264 1052 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-212ENST00000539382 KAZALD1Q96I82 304 aa13.86□□□□□ -0.19
CTCFL-212ENST00000539382 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
CTCFL-212ENST00000539382 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
CTCFL-212ENST00000539382 A0A0G2JS52 829 aa13.85□□□□□ -0.19
CTCFL-212ENST00000539382 EXOC6BQ9Y2D4 811 aa13.85□□□□□ -0.19
CTCFL-212ENST00000539382 AFF2P51816 1311 aa13.85□□□□□ -0.19
CTCFL-212ENST00000539382 ATP5J2-PTCD1G3V325 749 aa13.85□□□□□ -0.19
CTCFL-212ENST00000539382 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-212ENST00000539382 MEX3CQ5U5Q3 659 aaKnown RBP13.85□□□□□ -0.19
CTCFL-212ENST00000539382 PTF1AQ7RTS3 328 aa13.85□□□□□ -0.19
CTCFL-212ENST00000539382 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
CTCFL-212ENST00000539382 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-212ENST00000539382 C9orf78Q9NZ63 289 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-212ENST00000539382 GRM8O00222 908 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 FAM182BQ5T319 152 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 PLBD2Q8NHP8 589 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-212ENST00000539382 UTYO14607 1347 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 HMMRO75330 724 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 SEC24BO95487 1268 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 CYP19A1P11511 503 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-212ENST00000539382 GCKRQ14397 625 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
CTCFL-212ENST00000539382 SUCLG2Q96I99 432 aa13.83□□□□□ -0.2
CTCFL-212ENST00000539382 ZBTB3Q9H5J0 574 aa13.83□□□□□ -0.2
CTCFL-212ENST00000539382 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.83□□□□□ -0.2
CTCFL-212ENST00000539382 POLA2Q14181 598 aa13.83□□□□□ -0.2
CTCFL-212ENST00000539382 GJD4Q96KN9 370 aaPredicted RBP13.83□□□□□ -0.2
CTCFL-212ENST00000539382 EP400Q96L91 3159 aa13.82□□□□□ -0.2
CTCFL-212ENST00000539382 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
CTCFL-212ENST00000539382 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
CTCFL-212ENST00000539382 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
CTCFL-212ENST00000539382 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-212ENST00000539382 ZNF330Q9Y3S2 320 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-212ENST00000539382 STARD3NLO95772 234 aa13.81□□□□□ -0.2
CTCFL-212ENST00000539382 ANP32AP39687 249 aaKnown RBP13.81□□□□□ -0.2
CTCFL-212ENST00000539382 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
CTCFL-212ENST00000539382 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
CTCFL-212ENST00000539382 ZBTB1Q9Y2K1 713 aa13.81□□□□□ -0.2
CTCFL-212ENST00000539382 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
CTCFL-212ENST00000539382 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
CTCFL-212ENST00000539382 TJP1Q07157 1748 aa13.81□□□□□ -0.2
CTCFL-212ENST00000539382 MTX1Q13505 466 aa13.8□□□□□ -0.2
CTCFL-212ENST00000539382 NUP188Q5SRE5 1749 aa13.8□□□□□ -0.2
CTCFL-212ENST00000539382 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-212ENST00000539382 ITPK1Q13572 414 aa13.8□□□□□ -0.2
CTCFL-212ENST00000539382 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
CTCFL-212ENST00000539382 SIK1P57059 783 aa13.79□□□□□ -0.2
CTCFL-212ENST00000539382 NPM2Q86SE8 214 aaKnown RBP13.79□□□□□ -0.2
CTCFL-212ENST00000539382 CASP7P55210 303 aa13.79□□□□□ -0.2
CTCFL-212ENST00000539382 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
CTCFL-212ENST00000539382 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
CTCFL-212ENST00000539382 ATRNO75882 1429 aa13.78□□□□□ -0.2
CTCFL-212ENST00000539382 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
CTCFL-212ENST00000539382 SURF6O75683 361 aaKnown RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
CTCFL-212ENST00000539382 KCNQ4P56696 695 aa13.78□□□□□ -0.2
CTCFL-212ENST00000539382 RTL5Q5HYW3 569 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 AFDNP55196 1824 aaKnown RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 A0A087WZG4 1122 aa13.78□□□□□ -0.2
CTCFL-212ENST00000539382 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-212ENST00000539382 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
CTCFL-212ENST00000539382 HLFQ16534 295 aa13.77□□□□□ -0.21
CTCFL-212ENST00000539382 BMP2KLQ5H9B9 411 aa13.77□□□□□ -0.21
CTCFL-212ENST00000539382 ARXQ96QS3 562 aa13.76□□□□□ -0.21
CTCFL-212ENST00000539382 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
CTCFL-212ENST00000539382 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
CTCFL-212ENST00000539382 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-212ENST00000539382 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-212ENST00000539382 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
CTCFL-212ENST00000539382 H7C1W4 665 aa13.76□□□□□ -0.21
CTCFL-212ENST00000539382 TSHZ3Q63HK5 1081 aa13.76□□□□□ -0.21
CTCFL-212ENST00000539382 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
CTCFL-212ENST00000539382 CRKLP46109 303 aaKnown RBP13.75□□□□□ -0.21
CTCFL-212ENST00000539382 TCIRG1Q13488 830 aa13.75□□□□□ -0.21
CTCFL-212ENST00000539382 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
CTCFL-212ENST00000539382 KLHDC4Q8TBB5 520 aa13.75□□□□□ -0.21
CTCFL-212ENST00000539382 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
CTCFL-212ENST00000539382 MAP3K15Q6ZN16 1313 aa13.75□□□□□ -0.21
CTCFL-212ENST00000539382 MYH14Q7Z406 1995 aaKnown RBP13.75□□□□□ -0.21
CTCFL-212ENST00000539382 CWC25Q9NXE8 425 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-212ENST00000539382 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms