RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 DNAJC10Q8IXB1 793 aa25.21■■□□□ 1.63
CDH5-202ENST00000539168 PNMA6EA0A0J9YXQ4 647 aa25.2■■□□□ 1.63
CDH5-202ENST00000539168 ANP32AP39687 249 aaKnown RBP25.2■■□□□ 1.63
CDH5-202ENST00000539168 PPP1R42Q7Z4L9 355 aa25.2■■□□□ 1.63
CDH5-202ENST00000539168 COL15A1P39059 1388 aa25.2■■□□□ 1.62
CDH5-202ENST00000539168 KAT6BQ8WYB5 2073 aa25.2■■□□□ 1.62
CDH5-202ENST00000539168 BMP2KLQ5H9B9 411 aa25.2■■□□□ 1.62
CDH5-202ENST00000539168 SRGAP3O43295 1099 aa25.18■■□□□ 1.62
CDH5-202ENST00000539168 PIP4K2AP48426 406 aaPredicted RBP25.18■■□□□ 1.62
CDH5-202ENST00000539168 LRRCC1Q9C099 1032 aa25.18■■□□□ 1.62
CDH5-202ENST00000539168 THSD7AQ9UPZ6 1657 aa25.18■■□□□ 1.62
CDH5-202ENST00000539168 EIF5BO60841 1220 aaKnown RBP25.17■■□□□ 1.62
CDH5-202ENST00000539168 CICQ96RK0 1608 aaPredicted RBP25.17■■□□□ 1.62
CDH5-202ENST00000539168 NUP188Q5SRE5 1749 aa25.17■■□□□ 1.62
CDH5-202ENST00000539168 KIF6Q6ZMV9 814 aa25.17■■□□□ 1.62
CDH5-202ENST00000539168 TRPC5Q9UL62 973 aaPredicted RBP25.17■■□□□ 1.62
CDH5-202ENST00000539168 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
CDH5-202ENST00000539168 GJD4Q96KN9 370 aaPredicted RBP25.16■■□□□ 1.62
CDH5-202ENST00000539168 AFF2P51816 1311 aa25.15■■□□□ 1.62
CDH5-202ENST00000539168 AFDNP55196 1824 aaKnown RBP25.15■■□□□ 1.62
CDH5-202ENST00000539168 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.62
CDH5-202ENST00000539168 CCDC191Q8NCU4 936 aa25.14■■□□□ 1.62
CDH5-202ENST00000539168 TTLL7Q6ZT98 887 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 PLEKHM2Q8IWE5 1019 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 ACSBG1Q96GR2 724 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 UPF2Q9HAU5 1272 aaKnown RBP25.13■■□□□ 1.61
CDH5-202ENST00000539168 EXOC6BQ9Y2D4 811 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 NOP58Q9Y2X3 529 aaKnown RBP25.13■■□□□ 1.61
CDH5-202ENST00000539168 ATRNO75882 1429 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 A0A0G2JS52 829 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 IL6STP40189 918 aaPredicted RBP25.13■■□□□ 1.61
CDH5-202ENST00000539168 MYT1Q01538 1121 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 CWC25Q9NXE8 425 aaPredicted RBP25.13■■□□□ 1.61
CDH5-202ENST00000539168 TJP1Q07157 1748 aa25.13■■□□□ 1.61
CDH5-202ENST00000539168 SURF6O75683 361 aaKnown RBP25.12■■□□□ 1.61
CDH5-202ENST00000539168 HSP90AB3PQ58FF7 597 aa25.12■■□□□ 1.61
CDH5-202ENST00000539168 ERC1Q8IUD2 1116 aa25.12■■□□□ 1.61
CDH5-202ENST00000539168 SUCLG2Q96I99 432 aa25.12■■□□□ 1.61
CDH5-202ENST00000539168 SLC4A9Q96Q91 983 aa25.12■■□□□ 1.61
CDH5-202ENST00000539168 OSBPL3Q9H4L5 887 aa25.12■■□□□ 1.61
CDH5-202ENST00000539168 ZNF831Q5JPB2 1677 aa25.12■■□□□ 1.61
CDH5-202ENST00000539168 ONECUT3O60422 494 aaPredicted RBP25.11■■□□□ 1.61
CDH5-202ENST00000539168 TRIM28Q13263 835 aaKnown RBP25.11■■□□□ 1.61
CDH5-202ENST00000539168 KIF1BPQ96EK5 621 aa25.11■■□□□ 1.61
CDH5-202ENST00000539168 LOC102724428A0A0B4J2F2 783 aa25.1■■□□□ 1.61
CDH5-202ENST00000539168 SIK1P57059 783 aa25.1■■□□□ 1.61
CDH5-202ENST00000539168 PALLDQ8WX93 1383 aa25.1■■□□□ 1.61
CDH5-202ENST00000539168 A0A087WZG4 1122 aa25.1■■□□□ 1.61
CDH5-202ENST00000539168 MAP3K15Q6ZN16 1313 aa25.09■■□□□ 1.61
CDH5-202ENST00000539168 APBB1O00213 710 aa25.09■■□□□ 1.61
CDH5-202ENST00000539168 TCIRG1Q13488 830 aa25.09■■□□□ 1.61
CDH5-202ENST00000539168 ZBTB3Q9H5J0 574 aa25.09■■□□□ 1.61
CDH5-202ENST00000539168 BICC1Q9H694 974 aaKnown RBP25.09■■□□□ 1.61
CDH5-202ENST00000539168 H7C1W4 665 aa25.08■■□□□ 1.61
CDH5-202ENST00000539168 ATP6V1AP38606 617 aa25.08■■□□□ 1.61
CDH5-202ENST00000539168 ERVV-1B6SEH8 477 aa25.07■■□□□ 1.6
CDH5-202ENST00000539168 ATP5J2-PTCD1G3V325 749 aa25.07■■□□□ 1.6
CDH5-202ENST00000539168 SMARCA5O60264 1052 aaPredicted RBP25.07■■□□□ 1.6
CDH5-202ENST00000539168 TTC22Q5TAA0 569 aa25.07■■□□□ 1.6
CDH5-202ENST00000539168 KAZALD1Q96I82 304 aa25.07■■□□□ 1.6
CDH5-202ENST00000539168 ISCA1Q9BUE6 129 aa25.07■■□□□ 1.6
CDH5-202ENST00000539168 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
CDH5-202ENST00000539168 AOX1Q06278 1338 aa25.07■■□□□ 1.6
CDH5-202ENST00000539168 GIGYF2Q6Y7W6 1299 aaKnown RBP25.06■■□□□ 1.6
CDH5-202ENST00000539168 RHPN1Q8TCX5 695 aa25.06■■□□□ 1.6
CDH5-202ENST00000539168 CCDC87Q9NVE4 849 aa25.06■■□□□ 1.6
CDH5-202ENST00000539168 ZNF330Q9Y3S2 320 aaPredicted RBP25.06■■□□□ 1.6
CDH5-202ENST00000539168 UBE3BQ7Z3V4 1068 aa25.05■■□□□ 1.6
CDH5-202ENST00000539168 ZBTB1Q9Y2K1 713 aa25.05■■□□□ 1.6
CDH5-202ENST00000539168 CASP7P55210 303 aa25.04■■□□□ 1.6
CDH5-202ENST00000539168 OS9Q13438 667 aaPredicted RBP25.04■■□□□ 1.6
CDH5-202ENST00000539168 C16orf71Q8IYS4 520 aaPredicted RBP25.04■■□□□ 1.6
CDH5-202ENST00000539168 DDRGK1Q96HY6 314 aa25.04■■□□□ 1.6
CDH5-202ENST00000539168 RREB1Q92766 1687 aa25.04■■□□□ 1.6
CDH5-202ENST00000539168 PDE1AP54750 535 aa25.04■■□□□ 1.6
CDH5-202ENST00000539168 STAP2Q9UGK3 403 aa25.04■■□□□ 1.6
CDH5-202ENST00000539168 NHSQ6T4R5 1651 aa25.03■■□□□ 1.6
CDH5-202ENST00000539168 SALL3Q9BXA9 1300 aa25.03■■□□□ 1.6
CDH5-202ENST00000539168 G3BP1Q13283 466 aaKnown RBP eCLIP25.03■■□□□ 1.6
CDH5-202ENST00000539168 MX1P20591 662 aa25.02■■□□□ 1.6
CDH5-202ENST00000539168 KCNQ2O43526 872 aa25.01■■□□□ 1.59
CDH5-202ENST00000539168 CDC45O75419 566 aa25.01■■□□□ 1.59
CDH5-202ENST00000539168 EIF5P55010 431 aaKnown RBP25.01■■□□□ 1.59
CDH5-202ENST00000539168 CRKLP46109 303 aaKnown RBP25.01■■□□□ 1.59
CDH5-202ENST00000539168 CLASRPQ8N2M8 674 aaKnown RBP25.01■■□□□ 1.59
CDH5-202ENST00000539168 IPO9Q96P70 1041 aaKnown RBP25.01■■□□□ 1.59
CDH5-202ENST00000539168 QTRT2Q9H974 415 aaKnown RBP25.01■■□□□ 1.59
CDH5-202ENST00000539168 COPRSQ9NQ92 184 aa25.01■■□□□ 1.59
CDH5-202ENST00000539168 INTS5Q6P9B9 1019 aaKnown RBP25■■□□□ 1.59
CDH5-202ENST00000539168 CASC1Q6TDU7 716 aa25■■□□□ 1.59
CDH5-202ENST00000539168 DZIP3Q86Y13 1208 aaKnown RBP25■■□□□ 1.59
CDH5-202ENST00000539168 PCCAP05165 728 aaPredicted RBP24.99■■□□□ 1.59
CDH5-202ENST00000539168 GSPT1P15170 499 aaKnown RBP24.99■■□□□ 1.59
CDH5-202ENST00000539168 OTUD7AQ8TE49 926 aaPredicted RBP24.99■■□□□ 1.59
CDH5-202ENST00000539168 ARXQ96QS3 562 aa24.99■■□□□ 1.59
CDH5-202ENST00000539168 SEPT12Q8IYM1 358 aa24.98■■□□□ 1.59
CDH5-202ENST00000539168 ANKRD36CQ5JPF3 1778 aa24.98■■□□□ 1.59
CDH5-202ENST00000539168 COL5A3P25940 1745 aaPredicted RBP24.97■■□□□ 1.59
CDH5-202ENST00000539168 ITPK1Q13572 414 aa24.97■■□□□ 1.59
CDH5-202ENST00000539168 EPHA10Q5JZY3 1008 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms