RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 AMIGO3Q86WK7 504 aa14.62□□□□□ -0.07
CDCA3-206ENST00000536241 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
CDCA3-206ENST00000536241 AK7Q96M32 723 aa14.62□□□□□ -0.07
CDCA3-206ENST00000536241 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
CDCA3-206ENST00000536241 TAF1LQ8IZX4 1826 aa14.61□□□□□ -0.07
CDCA3-206ENST00000536241 ADCY9O60503 1353 aa14.61□□□□□ -0.07
CDCA3-206ENST00000536241 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
CDCA3-206ENST00000536241 CICQ96RK0 1608 aaPredicted RBP14.61□□□□□ -0.07
CDCA3-206ENST00000536241 UPF1Q92900 1129 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDCA3-206ENST00000536241 ABCC4O15439 1325 aa14.61□□□□□ -0.07
CDCA3-206ENST00000536241 HLFQ16534 295 aa14.6□□□□□ -0.07
CDCA3-206ENST00000536241 TRAPPC3LQ5T215 181 aa14.6□□□□□ -0.07
CDCA3-206ENST00000536241 INTS3Q68E01 1043 aaKnown RBP14.6□□□□□ -0.07
CDCA3-206ENST00000536241 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
CDCA3-206ENST00000536241 ITPRIPQ8IWB1 547 aa14.6□□□□□ -0.07
CDCA3-206ENST00000536241 EXOC6Q8TAG9 804 aa14.6□□□□□ -0.07
CDCA3-206ENST00000536241 ARHGEF1Q92888 912 aaKnown RBP14.6□□□□□ -0.07
CDCA3-206ENST00000536241 METTL22Q9BUU2 404 aaPredicted RBP14.6□□□□□ -0.07
CDCA3-206ENST00000536241 A0A087WZG4 1122 aa14.59□□□□□ -0.07
CDCA3-206ENST00000536241 PHF14O94880 888 aa14.59□□□□□ -0.07
CDCA3-206ENST00000536241 MVPQ14764 893 aaKnown RBP14.59□□□□□ -0.07
CDCA3-206ENST00000536241 BEND3Q5T5X7 828 aa14.59□□□□□ -0.07
CDCA3-206ENST00000536241 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
CDCA3-206ENST00000536241 MAP3K15Q6ZN16 1313 aa14.59□□□□□ -0.07
CDCA3-206ENST00000536241 C4BP0C0L5 1744 aa14.59□□□□□ -0.07
CDCA3-206ENST00000536241 CCT4P50991 539 aaKnown RBP14.58□□□□□ -0.08
CDCA3-206ENST00000536241 ZNF827Q17R98 1081 aa14.58□□□□□ -0.08
CDCA3-206ENST00000536241 MYD88Q99836 296 aa14.58□□□□□ -0.08
CDCA3-206ENST00000536241 TFCP2L1Q9NZI6 479 aa14.58□□□□□ -0.08
CDCA3-206ENST00000536241 COL15A1P39059 1388 aa14.58□□□□□ -0.08
CDCA3-206ENST00000536241 ERVV-1B6SEH8 477 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 ATP5J2-PTCD1G3V325 749 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 CAMTA2O94983 1202 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 NEXNQ0ZGT2 675 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 GIGYF2Q6Y7W6 1299 aaKnown RBP14.57□□□□□ -0.08
CDCA3-206ENST00000536241 SRCIN1Q9C0H9 1055 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 RREB1Q92766 1687 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.57□□□□□ -0.08
CDCA3-206ENST00000536241 ZBTB7BO15156 539 aaPredicted RBP14.57□□□□□ -0.08
CDCA3-206ENST00000536241 IGKV5-2P06315 115 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 RFC4P35249 363 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 TCIRG1Q13488 830 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 CWF19L2Q2TBE0 894 aaKnown RBP14.57□□□□□ -0.08
CDCA3-206ENST00000536241 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
CDCA3-206ENST00000536241 SRP68Q9UHB9 627 aaKnown RBP14.56□□□□□ -0.08
CDCA3-206ENST00000536241 NARFQ9UHQ1 456 aa14.56□□□□□ -0.08
CDCA3-206ENST00000536241 DDX19BQ9UMR2 479 aa14.56□□□□□ -0.08
CDCA3-206ENST00000536241 ZPR1O75312 459 aa14.55□□□□□ -0.08
CDCA3-206ENST00000536241 SSFA2P28290 1259 aa14.55□□□□□ -0.08
CDCA3-206ENST00000536241 SLC15A2Q16348 729 aa14.55□□□□□ -0.08
CDCA3-206ENST00000536241 USPL1Q5W0Q7 1092 aa14.55□□□□□ -0.08
CDCA3-206ENST00000536241 RGPD3A6NKT7 1758 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-206ENST00000536241 RGPD4Q7Z3J3 1758 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 NEURL1BA8MQ27 555 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 ALDH1L1O75891 902 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 ADRA2BP18089 450 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 COL23A1Q86Y22 540 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-206ENST00000536241 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 BCL2L12Q9HB09 334 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 ANO8Q9HCE9 1232 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-206ENST00000536241 STK32BQ9NY57 414 aa14.54□□□□□ -0.08
CDCA3-206ENST00000536241 GPTP24298 496 aa14.53□□□□□ -0.08
CDCA3-206ENST00000536241 HSP90AB3PQ58FF7 597 aa14.53□□□□□ -0.08
CDCA3-206ENST00000536241 CLEC4GQ6UXB4 293 aa14.53□□□□□ -0.08
CDCA3-206ENST00000536241 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
CDCA3-206ENST00000536241 MSH5O43196 834 aa14.52□□□□□ -0.08
CDCA3-206ENST00000536241 TRIM28Q13263 835 aaKnown RBP14.52□□□□□ -0.08
CDCA3-206ENST00000536241 GCKRQ14397 625 aa14.52□□□□□ -0.08
CDCA3-206ENST00000536241 ZNF34Q8IZ26 560 aa14.52□□□□□ -0.08
CDCA3-206ENST00000536241 JARID2Q92833 1246 aaPredicted RBP14.52□□□□□ -0.08
CDCA3-206ENST00000536241 MEIS3Q99687 375 aa14.52□□□□□ -0.08
CDCA3-206ENST00000536241 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.08
CDCA3-206ENST00000536241 UBR3Q6ZT12 1888 aa14.52□□□□□ -0.09
CDCA3-206ENST00000536241 ATP10DQ9P241 1426 aa14.52□□□□□ -0.09
CDCA3-206ENST00000536241 USP42Q9H9J4 1324 aaKnown RBP14.51□□□□□ -0.09
CDCA3-206ENST00000536241 CCDC191Q8NCU4 936 aa14.51□□□□□ -0.09
CDCA3-206ENST00000536241 FLAD1Q8NFF5 587 aa14.51□□□□□ -0.09
CDCA3-206ENST00000536241 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
CDCA3-206ENST00000536241 C9orf78Q9NZ63 289 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-206ENST00000536241 ZNF652Q9Y2D9 606 aa14.51□□□□□ -0.09
CDCA3-206ENST00000536241 ARFGEF2Q9Y6D5 1785 aa14.51□□□□□ -0.09
CDCA3-206ENST00000536241 PNPLA7Q6ZV29 1317 aa14.51□□□□□ -0.09
CDCA3-206ENST00000536241 NUP98P52948 1817 aa14.51□□□□□ -0.09
CDCA3-206ENST00000536241 NBPF7P0C2Y1 421 aaPredicted RBP14.5□□□□□ -0.09
CDCA3-206ENST00000536241 ERICH6BQ5W0A0 696 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 BICDL1Q6ZP65 573 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 NLRP10Q86W26 655 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 CWC25Q9NXE8 425 aaPredicted RBP14.5□□□□□ -0.09
CDCA3-206ENST00000536241 NIP7Q9Y221 180 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDCA3-206ENST00000536241 PXDNLA1KZ92 1463 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 NUP188Q5SRE5 1749 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 GRM8O00222 908 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 C1orf115Q9H7X2 142 aa14.5□□□□□ -0.09
CDCA3-206ENST00000536241 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
CDCA3-206ENST00000536241 H7C1W4 665 aa14.49□□□□□ -0.09
CDCA3-206ENST00000536241 RGL2O15211 777 aa14.49□□□□□ -0.09
CDCA3-206ENST00000536241 GNAI3P08754 354 aa14.49□□□□□ -0.09
CDCA3-206ENST00000536241 GYS1P13807 737 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms