RNA–Protein interactions for RNA: ENST00000535451.5

LDHA-213, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-213ENST00000535451 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
LDHA-213ENST00000535451 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
LDHA-213ENST00000535451 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
LDHA-213ENST00000535451 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
LDHA-213ENST00000535451 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
LDHA-213ENST00000535451 SCN7AQ01118 1682 aa16.44■□□□□ 0.22
LDHA-213ENST00000535451 SOGA3Q5TF21 947 aa16.44■□□□□ 0.22
LDHA-213ENST00000535451 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
LDHA-213ENST00000535451 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
LDHA-213ENST00000535451 SLX4Q8IY92 1834 aa16.43■□□□□ 0.22
LDHA-213ENST00000535451 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
LDHA-213ENST00000535451 IQCA1LA6NCM1 817 aa16.42■□□□□ 0.22
LDHA-213ENST00000535451 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
LDHA-213ENST00000535451 DICER1Q9UPY3 1922 aaKnown RBP16.42■□□□□ 0.22
LDHA-213ENST00000535451 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
LDHA-213ENST00000535451 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
LDHA-213ENST00000535451 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
LDHA-213ENST00000535451 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
LDHA-213ENST00000535451 EAPPQ56P03 285 aaPredicted RBP16.41■□□□□ 0.22
LDHA-213ENST00000535451 LDHDQ86WU2 507 aa16.41■□□□□ 0.22
LDHA-213ENST00000535451 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
LDHA-213ENST00000535451 ZNF277Q9NRM2 450 aaPredicted RBP16.41■□□□□ 0.22
LDHA-213ENST00000535451 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
LDHA-213ENST00000535451 FOXN1O15353 648 aa16.4■□□□□ 0.22
LDHA-213ENST00000535451 NPR1P16066 1061 aa16.4■□□□□ 0.22
LDHA-213ENST00000535451 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
LDHA-213ENST00000535451 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
LDHA-213ENST00000535451 CLEC11AQ9Y240 323 aa16.4■□□□□ 0.22
LDHA-213ENST00000535451 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
LDHA-213ENST00000535451 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
LDHA-213ENST00000535451 CEMIPQ8WUJ3 1361 aa16.39■□□□□ 0.21
LDHA-213ENST00000535451 CLEC4GQ6UXB4 293 aa16.39■□□□□ 0.21
LDHA-213ENST00000535451 L3MBTL3Q96JM7 780 aaPredicted RBP16.39■□□□□ 0.21
LDHA-213ENST00000535451 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
LDHA-213ENST00000535451 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
LDHA-213ENST00000535451 ZNF541Q9H0D2 1346 aa16.39■□□□□ 0.21
LDHA-213ENST00000535451 SIPA1L3O60292 1781 aaPredicted RBP16.38■□□□□ 0.21
LDHA-213ENST00000535451 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
LDHA-213ENST00000535451 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
LDHA-213ENST00000535451 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
LDHA-213ENST00000535451 MCM10Q7L590 875 aa16.38■□□□□ 0.21
LDHA-213ENST00000535451 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
LDHA-213ENST00000535451 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
LDHA-213ENST00000535451 TMEM88BA6NKF7 163 aa16.37■□□□□ 0.21
LDHA-213ENST00000535451 VEGFBP49765 207 aa16.37■□□□□ 0.21
LDHA-213ENST00000535451 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
LDHA-213ENST00000535451 CFAP53Q96M91 514 aa16.37■□□□□ 0.21
LDHA-213ENST00000535451 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
LDHA-213ENST00000535451 HACL1Q9UJ83 578 aa16.37■□□□□ 0.21
LDHA-213ENST00000535451 ITGBL1O95965 494 aaPredicted RBP16.36■□□□□ 0.21
LDHA-213ENST00000535451 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
LDHA-213ENST00000535451 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
LDHA-213ENST00000535451 EPHX2P34913 555 aa16.35■□□□□ 0.21
LDHA-213ENST00000535451 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
LDHA-213ENST00000535451 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
LDHA-213ENST00000535451 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
LDHA-213ENST00000535451 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
LDHA-213ENST00000535451 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
LDHA-213ENST00000535451 KLRG2A4D1S0 409 aaPredicted RBP16.34■□□□□ 0.21
LDHA-213ENST00000535451 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
LDHA-213ENST00000535451 CTCFP49711 727 aaPredicted RBP16.34■□□□□ 0.21
LDHA-213ENST00000535451 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
LDHA-213ENST00000535451 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
LDHA-213ENST00000535451 MAP1SQ66K74 1059 aaPredicted RBP16.34■□□□□ 0.21
LDHA-213ENST00000535451 PRDM10Q9NQV6 1147 aa16.34■□□□□ 0.21
LDHA-213ENST00000535451 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
LDHA-213ENST00000535451 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
LDHA-213ENST00000535451 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
LDHA-213ENST00000535451 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
LDHA-213ENST00000535451 HLFQ16534 295 aa16.33■□□□□ 0.2
LDHA-213ENST00000535451 CNTROBQ8N137 903 aa16.33■□□□□ 0.2
LDHA-213ENST00000535451 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
LDHA-213ENST00000535451 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.2
LDHA-213ENST00000535451 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
LDHA-213ENST00000535451 SCN4AP35499 1836 aa16.32■□□□□ 0.2
LDHA-213ENST00000535451 LBX1P52954 281 aa16.32■□□□□ 0.2
LDHA-213ENST00000535451 PNMA8AQ86V59 439 aaPredicted RBP16.32■□□□□ 0.2
LDHA-213ENST00000535451 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
LDHA-213ENST00000535451 FZD9O00144 591 aa16.31■□□□□ 0.2
LDHA-213ENST00000535451 DEFB115Q30KQ5 88 aa16.31■□□□□ 0.2
LDHA-213ENST00000535451 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
LDHA-213ENST00000535451 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
LDHA-213ENST00000535451 ABT1Q9ULW3 272 aaKnown RBP16.31■□□□□ 0.2
LDHA-213ENST00000535451 GJA3Q9Y6H8 435 aa16.31■□□□□ 0.2
LDHA-213ENST00000535451 NUTM1Q86Y26 1132 aa16.3■□□□□ 0.2
LDHA-213ENST00000535451 GPC2Q8N158 579 aa16.3■□□□□ 0.2
LDHA-213ENST00000535451 RGL2O15211 777 aa16.29■□□□□ 0.2
LDHA-213ENST00000535451 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
LDHA-213ENST00000535451 RASSF10A6NK89 507 aa16.28■□□□□ 0.2
LDHA-213ENST00000535451 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
LDHA-213ENST00000535451 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
LDHA-213ENST00000535451 WDR33Q9C0J8 1336 aaKnown RBP16.27■□□□□ 0.2
LDHA-213ENST00000535451 TCERG1O14776 1098 aaKnown RBP16.27■□□□□ 0.2
LDHA-213ENST00000535451 LMOD1P29536 600 aaPredicted RBP16.27■□□□□ 0.2
LDHA-213ENST00000535451 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.2
LDHA-213ENST00000535451 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
LDHA-213ENST00000535451 PSMD1Q99460 953 aa16.27■□□□□ 0.2
LDHA-213ENST00000535451 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
LDHA-213ENST00000535451 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
LDHA-213ENST00000535451 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms