RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 TJP1Q07157 1748 aa29.58■■■□□ 2.33
PTPMT1-205ENST00000534775 PNMA6EA0A0J9YXQ4 647 aa29.57■■■□□ 2.32
PTPMT1-205ENST00000534775 ACSBG1Q96GR2 724 aa29.57■■■□□ 2.32
PTPMT1-205ENST00000534775 A0A0G2JS52 829 aa29.56■■■□□ 2.32
PTPMT1-205ENST00000534775 MYT1Q01538 1121 aa29.56■■■□□ 2.32
PTPMT1-205ENST00000534775 SSH3Q8TE77 659 aa29.56■■■□□ 2.32
PTPMT1-205ENST00000534775 CICQ96RK0 1608 aaPredicted RBP29.55■■■□□ 2.32
PTPMT1-205ENST00000534775 GCKRQ14397 625 aa29.55■■■□□ 2.32
PTPMT1-205ENST00000534775 GJD4Q96KN9 370 aaPredicted RBP29.55■■■□□ 2.32
PTPMT1-205ENST00000534775 ATRNO75882 1429 aa29.54■■■□□ 2.32
PTPMT1-205ENST00000534775 POLA2Q14181 598 aa29.54■■■□□ 2.32
PTPMT1-205ENST00000534775 PPP1R42Q7Z4L9 355 aa29.54■■■□□ 2.32
PTPMT1-205ENST00000534775 SMARCC1Q92922 1105 aaPredicted RBP29.54■■■□□ 2.32
PTPMT1-205ENST00000534775 TRPC5Q9UL62 973 aaPredicted RBP29.54■■■□□ 2.32
PTPMT1-205ENST00000534775 CYP19A1P11511 503 aaPredicted RBP29.53■■■□□ 2.32
PTPMT1-205ENST00000534775 MTX1Q13505 466 aa29.53■■■□□ 2.32
PTPMT1-205ENST00000534775 TTLL7Q6ZT98 887 aa29.53■■■□□ 2.32
PTPMT1-205ENST00000534775 SLC4A9Q96Q91 983 aa29.53■■■□□ 2.32
PTPMT1-205ENST00000534775 SRGAP3O43295 1099 aa29.52■■■□□ 2.32
PTPMT1-205ENST00000534775 KIF6Q6ZMV9 814 aa29.49■■■□□ 2.31
PTPMT1-205ENST00000534775 EXOC6BQ9Y2D4 811 aa29.49■■■□□ 2.31
PTPMT1-205ENST00000534775 PALLDQ8WX93 1383 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 ZNF831Q5JPB2 1677 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 APBB1O00213 710 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 RAB11FIP3O75154 756 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 FBXO41Q8TF61 875 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 SUCLG2Q96I99 432 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 LRRCC1Q9C099 1032 aa29.48■■■□□ 2.31
PTPMT1-205ENST00000534775 COL15A1P39059 1388 aa29.47■■■□□ 2.31
PTPMT1-205ENST00000534775 HSP90AB4PQ58FF6 505 aa29.47■■■□□ 2.31
PTPMT1-205ENST00000534775 ZBTB3Q9H5J0 574 aa29.47■■■□□ 2.31
PTPMT1-205ENST00000534775 LOC102724428A0A0B4J2F2 783 aa29.46■■■□□ 2.31
PTPMT1-205ENST00000534775 SIK1P57059 783 aa29.46■■■□□ 2.31
PTPMT1-205ENST00000534775 BMP2KLQ5H9B9 411 aa29.46■■■□□ 2.31
PTPMT1-205ENST00000534775 ZNF330Q9Y3S2 320 aaPredicted RBP29.46■■■□□ 2.31
PTPMT1-205ENST00000534775 ATP5J2-PTCD1G3V325 749 aa29.45■■■□□ 2.31
PTPMT1-205ENST00000534775 ONECUT3O60422 494 aaPredicted RBP29.45■■■□□ 2.31
PTPMT1-205ENST00000534775 NHSQ6T4R5 1651 aa29.45■■■□□ 2.31
PTPMT1-205ENST00000534775 ATP6V1AP38606 617 aa29.45■■■□□ 2.3
PTPMT1-205ENST00000534775 PLEKHM2Q8IWE5 1019 aa29.45■■■□□ 2.3
PTPMT1-205ENST00000534775 CWC25Q9NXE8 425 aaPredicted RBP29.45■■■□□ 2.3
PTPMT1-205ENST00000534775 KCNQ2O43526 872 aa29.44■■■□□ 2.3
PTPMT1-205ENST00000534775 SMARCA5O60264 1052 aaPredicted RBP29.44■■■□□ 2.3
PTPMT1-205ENST00000534775 SURF6O75683 361 aaKnown RBP29.44■■■□□ 2.3
PTPMT1-205ENST00000534775 IL6STP40189 918 aaPredicted RBP29.44■■■□□ 2.3
PTPMT1-205ENST00000534775 NPM2Q86SE8 214 aaKnown RBP29.44■■■□□ 2.3
PTPMT1-205ENST00000534775 CCDC191Q8NCU4 936 aa29.44■■■□□ 2.3
PTPMT1-205ENST00000534775 RREB1Q92766 1687 aa29.43■■■□□ 2.3
PTPMT1-205ENST00000534775 A0A087WZG4 1122 aa29.43■■■□□ 2.3
PTPMT1-205ENST00000534775 ANP32AP39687 249 aaKnown RBP29.43■■■□□ 2.3
PTPMT1-205ENST00000534775 BICC1Q9H694 974 aaKnown RBP29.43■■■□□ 2.3
PTPMT1-205ENST00000534775 KAZALD1Q96I82 304 aa29.42■■■□□ 2.3
PTPMT1-205ENST00000534775 ZBTB1Q9Y2K1 713 aa29.42■■■□□ 2.3
PTPMT1-205ENST00000534775 MAP3K15Q6ZN16 1313 aa29.42■■■□□ 2.3
PTPMT1-205ENST00000534775 NOP58Q9Y2X3 529 aaKnown RBP29.42■■■□□ 2.3
PTPMT1-205ENST00000534775 TCIRG1Q13488 830 aa29.41■■■□□ 2.3
PTPMT1-205ENST00000534775 UBE3BQ7Z3V4 1068 aa29.41■■■□□ 2.3
PTPMT1-205ENST00000534775 C16orf71Q8IYS4 520 aaPredicted RBP29.4■■■□□ 2.3
PTPMT1-205ENST00000534775 CCDC87Q9NVE4 849 aa29.4■■■□□ 2.3
PTPMT1-205ENST00000534775 H7C1W4 665 aa29.39■■■□□ 2.3
PTPMT1-205ENST00000534775 TRIM28Q13263 835 aaKnown RBP29.39■■■□□ 2.3
PTPMT1-205ENST00000534775 HSP90AB3PQ58FF7 597 aa29.39■■■□□ 2.3
PTPMT1-205ENST00000534775 KIF1BPQ96EK5 621 aa29.39■■■□□ 2.3
PTPMT1-205ENST00000534775 ISCA1Q9BUE6 129 aa29.39■■■□□ 2.3
PTPMT1-205ENST00000534775 QTRT2Q9H974 415 aaKnown RBP29.39■■■□□ 2.3
PTPMT1-205ENST00000534775 COL5A3P25940 1745 aaPredicted RBP29.39■■■□□ 2.29
PTPMT1-205ENST00000534775 BTAF1O14981 1849 aa29.38■■■□□ 2.29
PTPMT1-205ENST00000534775 ANKRD36CQ5JPF3 1778 aa29.38■■■□□ 2.29
PTPMT1-205ENST00000534775 GIGYF2Q6Y7W6 1299 aaKnown RBP29.38■■■□□ 2.29
PTPMT1-205ENST00000534775 CASP7P55210 303 aa29.37■■■□□ 2.29
PTPMT1-205ENST00000534775 ERC1Q8IUD2 1116 aa29.37■■■□□ 2.29
PTPMT1-205ENST00000534775 SEPT12Q8IYM1 358 aa29.37■■■□□ 2.29
PTPMT1-205ENST00000534775 ARXQ96QS3 562 aa29.37■■■□□ 2.29
PTPMT1-205ENST00000534775 CRKLP46109 303 aaKnown RBP29.36■■■□□ 2.29
PTPMT1-205ENST00000534775 TTC22Q5TAA0 569 aa29.36■■■□□ 2.29
PTPMT1-205ENST00000534775 RHPN1Q8TCX5 695 aa29.36■■■□□ 2.29
PTPMT1-205ENST00000534775 BCL11AQ9H165 835 aa29.36■■■□□ 2.29
PTPMT1-205ENST00000534775 OSBPL3Q9H4L5 887 aa29.36■■■□□ 2.29
PTPMT1-205ENST00000534775 ERVV-1B6SEH8 477 aa29.35■■■□□ 2.29
PTPMT1-205ENST00000534775 OS9Q13438 667 aaPredicted RBP29.35■■■□□ 2.29
PTPMT1-205ENST00000534775 ITPK1Q13572 414 aa29.35■■■□□ 2.29
PTPMT1-205ENST00000534775 INTS5Q6P9B9 1019 aaKnown RBP29.35■■■□□ 2.29
PTPMT1-205ENST00000534775 RABL6Q3YEC7 729 aaPredicted RBP29.34■■■□□ 2.29
PTPMT1-205ENST00000534775 OTUD7AQ8TE49 926 aaPredicted RBP29.34■■■□□ 2.29
PTPMT1-205ENST00000534775 SBF2Q86WG5 1849 aa29.34■■■□□ 2.29
PTPMT1-205ENST00000534775 EIF5P55010 431 aaKnown RBP29.34■■■□□ 2.29
PTPMT1-205ENST00000534775 DZIP3Q86Y13 1208 aaKnown RBP29.34■■■□□ 2.29
PTPMT1-205ENST00000534775 UPF2Q9HAU5 1272 aaKnown RBP29.34■■■□□ 2.29
PTPMT1-205ENST00000534775 NUP98P52948 1817 aa29.33■■■□□ 2.29
PTPMT1-205ENST00000534775 EPHA10Q5JZY3 1008 aa29.32■■■□□ 2.28
PTPMT1-205ENST00000534775 SALL3Q9BXA9 1300 aa29.32■■■□□ 2.28
PTPMT1-205ENST00000534775 PDE1AP54750 535 aa29.31■■■□□ 2.28
PTPMT1-205ENST00000534775 JARID2Q92833 1246 aaPredicted RBP29.31■■■□□ 2.28
PTPMT1-205ENST00000534775 MX1P20591 662 aa29.31■■■□□ 2.28
PTPMT1-205ENST00000534775 GSPT1P15170 499 aaKnown RBP29.3■■■□□ 2.28
PTPMT1-205ENST00000534775 G3BP1Q13283 466 aaKnown RBP eCLIP29.3■■■□□ 2.28
PTPMT1-205ENST00000534775 AOX1Q06278 1338 aa29.29■■■□□ 2.28
PTPMT1-205ENST00000534775 MYH14Q7Z406 1995 aaKnown RBP29.29■■■□□ 2.28
PTPMT1-205ENST00000534775 ZNF772Q68DY9 489 aaPredicted RBP29.29■■■□□ 2.28
PTPMT1-205ENST00000534775 IL1RAPL2Q9NP60 686 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms