RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 DUSP27Q5VZP5 1158 aa27.77■■■□□ 2.04
PKP3-211ENST00000534401 DDX21Q9NR30 783 aaKnown RBP eCLIP27.77■■■□□ 2.04
PKP3-211ENST00000534401 ZNF652Q9Y2D9 606 aa27.77■■■□□ 2.04
PKP3-211ENST00000534401 MYL6BP14649 208 aa27.76■■■□□ 2.03
PKP3-211ENST00000534401 HLFQ16534 295 aa27.76■■■□□ 2.03
PKP3-211ENST00000534401 WDR63Q8IWG1 891 aa27.76■■■□□ 2.03
PKP3-211ENST00000534401 SETDB2Q96T68 719 aa27.76■■■□□ 2.03
PKP3-211ENST00000534401 UTRNP46939 3433 aa27.75■■■□□ 2.03
PKP3-211ENST00000534401 A0A0G2JLW4 131 aa27.75■■■□□ 2.03
PKP3-211ENST00000534401 DPEP1P16444 411 aa27.75■■■□□ 2.03
PKP3-211ENST00000534401 YY1P25490 414 aa27.75■■■□□ 2.03
PKP3-211ENST00000534401 BICDL1Q6ZP65 573 aa27.75■■■□□ 2.03
PKP3-211ENST00000534401 ANKRD31Q8N7Z5 1873 aa27.74■■■□□ 2.03
PKP3-211ENST00000534401 GRIN3BO60391 1043 aa27.73■■■□□ 2.03
PKP3-211ENST00000534401 PRR5LQ6MZQ0 368 aa27.73■■■□□ 2.03
PKP3-211ENST00000534401 C8orf58Q8NAV2 365 aa27.73■■■□□ 2.03
PKP3-211ENST00000534401 ATP10DQ9P241 1426 aa27.73■■■□□ 2.03
PKP3-211ENST00000534401 SENP3-EIF4A1A0A087X0R7 540 aa27.72■■■□□ 2.03
PKP3-211ENST00000534401 HDGFL1Q5TGJ6 251 aa27.72■■■□□ 2.03
PKP3-211ENST00000534401 ANXA1P04083 346 aa27.71■■■□□ 2.03
PKP3-211ENST00000534401 GIGYF2Q6Y7W6 1299 aaKnown RBP27.71■■■□□ 2.03
PKP3-211ENST00000534401 DLEC1Q9Y238 1755 aa27.71■■■□□ 2.03
PKP3-211ENST00000534401 KIF6Q6ZMV9 814 aa27.7■■■□□ 2.02
PKP3-211ENST00000534401 BRIP1Q9BX63 1249 aa27.7■■■□□ 2.02
PKP3-211ENST00000534401 DBF4Q9UBU7 674 aaPredicted RBP27.7■■■□□ 2.02
PKP3-211ENST00000534401 ZNF521Q96K83 1311 aa27.69■■■□□ 2.02
PKP3-211ENST00000534401 ZNF34Q8IZ26 560 aa27.69■■■□□ 2.02
PKP3-211ENST00000534401 NECTIN2Q92692 538 aa27.69■■■□□ 2.02
PKP3-211ENST00000534401 CHPF2Q9P2E5 772 aa27.69■■■□□ 2.02
PKP3-211ENST00000534401 NIP7Q9Y221 180 aaKnown RBP eCLIP27.69■■■□□ 2.02
PKP3-211ENST00000534401 ARFGEF1Q9Y6D6 1849 aa27.69■■■□□ 2.02
PKP3-211ENST00000534401 COPS6Q7L5N1 327 aa27.68■■■□□ 2.02
PKP3-211ENST00000534401 PDZRN3Q9UPQ7 1066 aa27.68■■■□□ 2.02
PKP3-211ENST00000534401 PELP1Q8IZL8 1130 aaKnown RBP27.67■■■□□ 2.02
PKP3-211ENST00000534401 TSPYL6Q8N831 410 aa27.67■■■□□ 2.02
PKP3-211ENST00000534401 XAGE3Q8WTP9 111 aa27.67■■■□□ 2.02
PKP3-211ENST00000534401 TSR2Q969E8 191 aaKnown RBP27.67■■■□□ 2.02
PKP3-211ENST00000534401 PIM2Q9P1W9 311 aa27.67■■■□□ 2.02
PKP3-211ENST00000534401 CHRNA5P30532 468 aa27.66■■■□□ 2.02
PKP3-211ENST00000534401 DIEXFQ68CQ4 756 aaKnown RBP27.66■■■□□ 2.02
PKP3-211ENST00000534401 CNBD1Q8NA66 436 aa27.66■■■□□ 2.02
PKP3-211ENST00000534401 ZBTB3Q9H5J0 574 aa27.66■■■□□ 2.02
PKP3-211ENST00000534401 HYPKQ9NX55 129 aa27.66■■■□□ 2.02
PKP3-211ENST00000534401 IBTKQ9P2D0 1353 aaPredicted RBP27.65■■■□□ 2.02
PKP3-211ENST00000534401 KLRG2A4D1S0 409 aaPredicted RBP27.65■■■□□ 2.02
PKP3-211ENST00000534401 CHMP4AQ9BY43 222 aa27.65■■■□□ 2.02
PKP3-211ENST00000534401 TPTE2Q6XPS3 522 aa27.64■■■□□ 2.02
PKP3-211ENST00000534401 NBPF5PQ86XG9 351 aaPredicted RBP27.64■■■□□ 2.02
PKP3-211ENST00000534401 SPINK5Q9NQ38 1064 aaPredicted RBP27.64■■■□□ 2.02
PKP3-211ENST00000534401 SALL2Q9Y467 1007 aaPredicted RBP27.64■■■□□ 2.02
PKP3-211ENST00000534401 ELL2O00472 640 aaPredicted RBP27.63■■■□□ 2.01
PKP3-211ENST00000534401 PDE6BP35913 854 aa27.63■■■□□ 2.01
PKP3-211ENST00000534401 UBN2Q6ZU65 1347 aa27.63■■■□□ 2.01
PKP3-211ENST00000534401 FANCIQ9NVI1 1328 aa27.63■■■□□ 2.01
PKP3-211ENST00000534401 ANKRD36CQ5JPF3 1778 aa27.63■■■□□ 2.01
PKP3-211ENST00000534401 COL11A2P13942 1736 aaPredicted RBP27.61■■■□□ 2.01
PKP3-211ENST00000534401 H0YIN7 160 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 ST5P78524 1137 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 DALRD3Q5D0E6 543 aaKnown RBP27.6■■■□□ 2.01
PKP3-211ENST00000534401 CCDC30Q5VVM6 783 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 C2CD5Q86YS7 1000 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 CCDC24Q8N4L8 307 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 PLBD2Q8NHP8 589 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 BCS1LQ9Y276 419 aa27.6■■■□□ 2.01
PKP3-211ENST00000534401 RIC1Q4ADV7 1423 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 CACNA1FO60840 1977 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 AIMP1Q12904 312 aaKnown RBP27.59■■■□□ 2.01
PKP3-211ENST00000534401 TCIRG1Q13488 830 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 PARP10Q53GL7 1025 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 ANKRD13DQ6ZTN6 518 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 NYXQ9GZU5 481 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 WWC3Q9ULE0 1092 aa27.59■■■□□ 2.01
PKP3-211ENST00000534401 TWISTNBQ3B726 338 aaPredicted RBP27.58■■■□□ 2.01
PKP3-211ENST00000534401 HSP90AB3PQ58FF7 597 aa27.58■■■□□ 2.01
PKP3-211ENST00000534401 SUSD4Q5VX71 490 aa27.58■■■□□ 2.01
PKP3-211ENST00000534401 MIER1Q8N108 512 aa27.58■■■□□ 2.01
PKP3-211ENST00000534401 NTSR2O95665 410 aa27.57■■■□□ 2
PKP3-211ENST00000534401 SRGNP10124 158 aa27.57■■■□□ 2
PKP3-211ENST00000534401 GPTP24298 496 aa27.56■■■□□ 2
PKP3-211ENST00000534401 TTLL6Q8N841 843 aa27.56■■■□□ 2
PKP3-211ENST00000534401 VAMP4O75379 141 aa27.55■■■□□ 2
PKP3-211ENST00000534401 GOLGA2Q08379 1002 aa27.55■■■□□ 2
PKP3-211ENST00000534401 STYK1Q6J9G0 422 aa27.55■■■□□ 2
PKP3-211ENST00000534401 PHAXQ9H814 394 aaKnown RBP27.55■■■□□ 2
PKP3-211ENST00000534401 TRIM28Q13263 835 aaKnown RBP27.54■■■□□ 2
PKP3-211ENST00000534401 RNF123Q5XPI4 1314 aa27.54■■■□□ 2
PKP3-211ENST00000534401 NLRP10Q86W26 655 aa27.54■■■□□ 2
PKP3-211ENST00000534401 ISCA1Q9BUE6 129 aa27.54■■■□□ 2
PKP3-211ENST00000534401 MYH16Q9H6N6 1097 aa27.54■■■□□ 2
PKP3-211ENST00000534401 ARFGEF2Q9Y6D5 1785 aa27.54■■■□□ 2
PKP3-211ENST00000534401 ABCC12Q96J65 1359 aa27.53■■■□□ 2
PKP3-211ENST00000534401 EXOSC9Q06265 439 aaKnown RBP27.53■■■□□ 2
PKP3-211ENST00000534401 SLC10A5Q5PT55 438 aa27.53■■■□□ 2
PKP3-211ENST00000534401 PPP1R42Q7Z4L9 355 aa27.53■■■□□ 2
PKP3-211ENST00000534401 FAM177BA6PVY3 158 aa27.52■■■□□ 2
PKP3-211ENST00000534401 NPHP1O15259 732 aa27.52■■■□□ 2
PKP3-211ENST00000534401 CRY2Q49AN0 593 aa27.52■■■□□ 2
PKP3-211ENST00000534401 ERFEQ4G0M1 354 aa27.52■■■□□ 2
PKP3-211ENST00000534401 MASTLQ96GX5 879 aa27.52■■■□□ 2
PKP3-211ENST00000534401 NUTM1Q86Y26 1132 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms