RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
AP003555.3-201ENST00000534086 NGEFQ8N5V2 710 aa23.33■■□□□ 1.33
AP003555.3-201ENST00000534086 RUNDC1Q96C34 613 aa23.33■■□□□ 1.33
AP003555.3-201ENST00000534086 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
AP003555.3-201ENST00000534086 NBPF5PQ86XG9 351 aaPredicted RBP23.32■■□□□ 1.32
AP003555.3-201ENST00000534086 BABAM1Q9NWV8 329 aa23.32■■□□□ 1.32
AP003555.3-201ENST00000534086 ADAMTS8Q9UP79 889 aa23.32■■□□□ 1.32
AP003555.3-201ENST00000534086 ANKRD31Q8N7Z5 1873 aa23.32■■□□□ 1.32
AP003555.3-201ENST00000534086 RNF181Q9P0P0 153 aa23.31■■□□□ 1.32
AP003555.3-201ENST00000534086 NIP7Q9Y221 180 aaKnown RBP eCLIP23.31■■□□□ 1.32
AP003555.3-201ENST00000534086 MYL6BP14649 208 aa23.3■■□□□ 1.32
AP003555.3-201ENST00000534086 HLFQ16534 295 aa23.3■■□□□ 1.32
AP003555.3-201ENST00000534086 TPTE2Q6XPS3 522 aa23.29■■□□□ 1.32
AP003555.3-201ENST00000534086 ERVV-1B6SEH8 477 aa23.28■■□□□ 1.32
AP003555.3-201ENST00000534086 RASSF7Q02833 373 aa23.28■■□□□ 1.32
AP003555.3-201ENST00000534086 FAM177BA6PVY3 158 aa23.27■■□□□ 1.32
AP003555.3-201ENST00000534086 KIF3CO14782 793 aa23.27■■□□□ 1.32
AP003555.3-201ENST00000534086 KIF6Q6ZMV9 814 aa23.27■■□□□ 1.32
AP003555.3-201ENST00000534086 SBF1O95248 1867 aa23.27■■□□□ 1.32
AP003555.3-201ENST00000534086 SRGNP10124 158 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 STYK1Q6J9G0 422 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 TTLL7Q6ZT98 887 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 CNKSR1Q969H4 720 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 ERBB4Q15303 1308 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 MAP3K15Q6ZN16 1313 aa23.26■■□□□ 1.31
AP003555.3-201ENST00000534086 C21orf2O43822 256 aa23.25■■□□□ 1.31
AP003555.3-201ENST00000534086 LMNB1P20700 586 aa23.25■■□□□ 1.31
AP003555.3-201ENST00000534086 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
AP003555.3-201ENST00000534086 ZNF219Q9P2Y4 722 aaPredicted RBP23.25■■□□□ 1.31
AP003555.3-201ENST00000534086 COL11A2P13942 1736 aaPredicted RBP23.25■■□□□ 1.31
AP003555.3-201ENST00000534086 GTF2E1P29083 439 aaPredicted RBP23.24■■□□□ 1.31
AP003555.3-201ENST00000534086 LAS1LQ9Y4W2 734 aaKnown RBP23.24■■□□□ 1.31
AP003555.3-201ENST00000534086 CHL1O00533 1208 aa23.23■■□□□ 1.31
AP003555.3-201ENST00000534086 ZBTB3Q9H5J0 574 aa23.23■■□□□ 1.31
AP003555.3-201ENST00000534086 NMRK2Q9NPI5 230 aa23.23■■□□□ 1.31
AP003555.3-201ENST00000534086 NFKBIEO00221 500 aa23.22■■□□□ 1.31
AP003555.3-201ENST00000534086 KDM2BQ8NHM5 1336 aa23.22■■□□□ 1.31
AP003555.3-201ENST00000534086 PRELPP51888 382 aa23.21■■□□□ 1.31
AP003555.3-201ENST00000534086 PRPF40BQ6NWY9 871 aaKnown RBP23.21■■□□□ 1.31
AP003555.3-201ENST00000534086 NYXQ9GZU5 481 aa23.21■■□□□ 1.31
AP003555.3-201ENST00000534086 NUP98P52948 1817 aa23.21■■□□□ 1.31
AP003555.3-201ENST00000534086 ZC3H4Q9UPT8 1303 aaKnown RBP23.2■■□□□ 1.3
AP003555.3-201ENST00000534086 KLRG2A4D1S0 409 aaPredicted RBP23.2■■□□□ 1.3
AP003555.3-201ENST00000534086 NPR1P16066 1061 aa23.2■■□□□ 1.3
AP003555.3-201ENST00000534086 PDIA6Q15084 440 aa23.2■■□□□ 1.3
AP003555.3-201ENST00000534086 GPTP24298 496 aa23.19■■□□□ 1.3
AP003555.3-201ENST00000534086 GIGYF2Q6Y7W6 1299 aaKnown RBP23.19■■□□□ 1.3
AP003555.3-201ENST00000534086 NECTIN2Q92692 538 aa23.19■■□□□ 1.3
AP003555.3-201ENST00000534086 SLX4Q8IY92 1834 aa23.19■■□□□ 1.3
AP003555.3-201ENST00000534086 TOMM70O94826 608 aa23.18■■□□□ 1.3
AP003555.3-201ENST00000534086 ANXA1P04083 346 aa23.18■■□□□ 1.3
AP003555.3-201ENST00000534086 PROSER3Q2NL68 480 aa23.18■■□□□ 1.3
AP003555.3-201ENST00000534086 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
AP003555.3-201ENST00000534086 LRP10Q7Z4F1 713 aa23.18■■□□□ 1.3
AP003555.3-201ENST00000534086 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
AP003555.3-201ENST00000534086 APAF1O14727 1248 aa23.17■■□□□ 1.3
AP003555.3-201ENST00000534086 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
AP003555.3-201ENST00000534086 NUTM1Q86Y26 1132 aa23.17■■□□□ 1.3
AP003555.3-201ENST00000534086 CACNA1SQ13698 1873 aa23.17■■□□□ 1.3
AP003555.3-201ENST00000534086 HSPA6P17066 643 aa23.16■■□□□ 1.3
AP003555.3-201ENST00000534086 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
AP003555.3-201ENST00000534086 ZNF34Q8IZ26 560 aa23.16■■□□□ 1.3
AP003555.3-201ENST00000534086 CFAP44Q96MT7 982 aa23.16■■□□□ 1.3
AP003555.3-201ENST00000534086 RRAGCQ9HB90 399 aa23.16■■□□□ 1.3
AP003555.3-201ENST00000534086 UBN2Q6ZU65 1347 aa23.15■■□□□ 1.3
AP003555.3-201ENST00000534086 ERFEQ4G0M1 354 aa23.15■■□□□ 1.3
AP003555.3-201ENST00000534086 SUSD4Q5VX71 490 aa23.15■■□□□ 1.3
AP003555.3-201ENST00000534086 TAOK3Q9H2K8 898 aa23.15■■□□□ 1.3
AP003555.3-201ENST00000534086 FER1L6Q2WGJ9 1857 aa23.15■■□□□ 1.3
AP003555.3-201ENST00000534086 CEP350Q5VT06 3117 aa23.15■■□□□ 1.3
AP003555.3-201ENST00000534086 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
AP003555.3-201ENST00000534086 GLTPD2A6NH11 291 aa23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 ALDH1B1P30837 517 aa23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 AIMP1Q12904 312 aaKnown RBP23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 C7orf43Q8WVR3 580 aa23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 DDX21Q9NR30 783 aaKnown RBP eCLIP23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 ARFGEF2Q9Y6D5 1785 aa23.14■■□□□ 1.29
AP003555.3-201ENST00000534086 ZNF316A6NFI3 1004 aaPredicted RBP23.13■■□□□ 1.29
AP003555.3-201ENST00000534086 PPP1R42Q7Z4L9 355 aa23.13■■□□□ 1.29
AP003555.3-201ENST00000534086 ABCC12Q96J65 1359 aa23.13■■□□□ 1.29
AP003555.3-201ENST00000534086 IBTKQ9P2D0 1353 aaPredicted RBP23.13■■□□□ 1.29
AP003555.3-201ENST00000534086 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
AP003555.3-201ENST00000534086 CCDC93Q567U6 631 aa23.12■■□□□ 1.29
AP003555.3-201ENST00000534086 XAGE3Q8WTP9 111 aa23.12■■□□□ 1.29
AP003555.3-201ENST00000534086 NTSR2O95665 410 aa23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 HOXB7P09629 217 aa23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 CRY2Q49AN0 593 aa23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 HDGFL1Q5TGJ6 251 aa23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 DPY19L2Q6NUT2 758 aa23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 MBIPQ9NS73 344 aa23.11■■□□□ 1.29
AP003555.3-201ENST00000534086 CCDC184Q52MB2 194 aa23.1■■□□□ 1.29
AP003555.3-201ENST00000534086 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
AP003555.3-201ENST00000534086 TIAM2Q8IVF5 1701 aa23.1■■□□□ 1.29
AP003555.3-201ENST00000534086 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
AP003555.3-201ENST00000534086 ZNF853P0CG23 659 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms