RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ZC3H4Q9UPT8 1303 aaKnown RBP16.34■□□□□ 0.21
CAPRIN1-213ENST00000533562 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
CAPRIN1-213ENST00000533562 RASSF7Q02833 373 aa16.33■□□□□ 0.2
CAPRIN1-213ENST00000533562 LMOD3Q0VAK6 560 aa16.33■□□□□ 0.2
CAPRIN1-213ENST00000533562 STYK1Q6J9G0 422 aa16.33■□□□□ 0.2
CAPRIN1-213ENST00000533562 MASTLQ96GX5 879 aa16.33■□□□□ 0.2
CAPRIN1-213ENST00000533562 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
CAPRIN1-213ENST00000533562 C21orf2O43822 256 aa16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 SRGNP10124 158 aa16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 RRP7AQ9Y3A4 280 aaKnown RBP16.32■□□□□ 0.2
CAPRIN1-213ENST00000533562 SBF1O95248 1867 aa16.31■□□□□ 0.2
CAPRIN1-213ENST00000533562 ERVV-1B6SEH8 477 aa16.31■□□□□ 0.2
CAPRIN1-213ENST00000533562 GTF2E1P29083 439 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-213ENST00000533562 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
CAPRIN1-213ENST00000533562 SOGA3Q5TF21 947 aa16.31■□□□□ 0.2
CAPRIN1-213ENST00000533562 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
CAPRIN1-213ENST00000533562 NFKBIEO00221 500 aa16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 HLFQ16534 295 aa16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 KIF6Q6ZMV9 814 aa16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 RBM46Q8TBY0 533 aaKnown RBP16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 RRAGCQ9HB90 399 aa16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
CAPRIN1-213ENST00000533562 GLTPD2A6NH11 291 aa16.29■□□□□ 0.2
CAPRIN1-213ENST00000533562 MYL6BP14649 208 aa16.29■□□□□ 0.2
CAPRIN1-213ENST00000533562 APLP1P51693 650 aa16.29■□□□□ 0.2
CAPRIN1-213ENST00000533562 PRPF40BQ6NWY9 871 aaKnown RBP16.29■□□□□ 0.2
CAPRIN1-213ENST00000533562 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
CAPRIN1-213ENST00000533562 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 KLRG2A4D1S0 409 aaPredicted RBP16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 NPR1P16066 1061 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 PRELPP51888 382 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
CAPRIN1-213ENST00000533562 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
CAPRIN1-213ENST00000533562 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
CAPRIN1-213ENST00000533562 TAOK3Q9H2K8 898 aa16.27■□□□□ 0.2
CAPRIN1-213ENST00000533562 KDM3BQ7LBC6 1761 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 LTBP3Q9NS15 1303 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 ALDH1B1P30837 517 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 FSTL1Q12841 308 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
CAPRIN1-213ENST00000533562 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
CAPRIN1-213ENST00000533562 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
CAPRIN1-213ENST00000533562 C7orf43Q8WVR3 580 aa16.24■□□□□ 0.19
CAPRIN1-213ENST00000533562 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
CAPRIN1-213ENST00000533562 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
CAPRIN1-213ENST00000533562 CCDC88AQ3V6T2 1871 aa16.23■□□□□ 0.19
CAPRIN1-213ENST00000533562 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
CAPRIN1-213ENST00000533562 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
CAPRIN1-213ENST00000533562 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
CAPRIN1-213ENST00000533562 SLX4Q8IY92 1834 aa16.23■□□□□ 0.19
CAPRIN1-213ENST00000533562 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 CHL1O00533 1208 aa16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 GPTP24298 496 aa16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 SMC1BQ8NDV3 1235 aa16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
CAPRIN1-213ENST00000533562 FER1L6Q2WGJ9 1857 aa16.21■□□□□ 0.19
CAPRIN1-213ENST00000533562 PDIA6Q15084 440 aa16.21■□□□□ 0.19
CAPRIN1-213ENST00000533562 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
CAPRIN1-213ENST00000533562 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
CAPRIN1-213ENST00000533562 NUP98P52948 1817 aa16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 LRP10Q7Z4F1 713 aa16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
CAPRIN1-213ENST00000533562 IBTKQ9P2D0 1353 aaPredicted RBP16.19■□□□□ 0.18
CAPRIN1-213ENST00000533562 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
CAPRIN1-213ENST00000533562 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 PROSER3Q2NL68 480 aa16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 DNAJC5GQ8N7S2 189 aa16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
CAPRIN1-213ENST00000533562 DICER1Q9UPY3 1922 aaKnown RBP16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 POTECB2RU33 542 aa16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 NTSR2O95665 410 aa16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 ANXA1P04083 346 aa16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 GRIPAP1Q4V328 841 aa16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms