RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 ATG3Q9NT62 314 aa27.01■■□□□ 1.91
AP004608.1-202ENST00000533390 A1BGP04217 495 aa27■■□□□ 1.91
AP004608.1-202ENST00000533390 BARGINQ6ZT62 677 aa27■■□□□ 1.91
AP004608.1-202ENST00000533390 SURF6O75683 361 aaKnown RBP27■■□□□ 1.91
AP004608.1-202ENST00000533390 SYTL4Q96C24 671 aaPredicted RBP27■■□□□ 1.91
AP004608.1-202ENST00000533390 GCKRQ14397 625 aa26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 HSP90AB4PQ58FF6 505 aa26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 OTUD7AQ8TE49 926 aaPredicted RBP26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 RBM42Q9BTD8 480 aaKnown RBP26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 UNC5CLQ8IV45 518 aa26.98■■□□□ 1.91
AP004608.1-202ENST00000533390 MFAP1P55081 439 aaKnown RBP26.98■■□□□ 1.91
AP004608.1-202ENST00000533390 NUP188Q5SRE5 1749 aa26.98■■□□□ 1.91
AP004608.1-202ENST00000533390 GSPT1P15170 499 aaKnown RBP26.97■■□□□ 1.91
AP004608.1-202ENST00000533390 SUCLG2Q96I99 432 aa26.97■■□□□ 1.91
AP004608.1-202ENST00000533390 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
AP004608.1-202ENST00000533390 C8orf37Q96NL8 207 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 STARD3NLO95772 234 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 CERKQ8TCT0 537 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 TBC1D32Q96NH3 1257 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 OSBPL3Q9H4L5 887 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 CDC45O75419 566 aa26.95■■□□□ 1.9
AP004608.1-202ENST00000533390 DNAJC10Q8IXB1 793 aa26.95■■□□□ 1.9
AP004608.1-202ENST00000533390 PRIM1P49642 420 aaKnown RBP26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 PDE1AP54750 535 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 TTLL7Q6ZT98 887 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 KIF1BPQ96EK5 621 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 SPATA31A6Q5VVP1 1343 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 EIF5BO60841 1220 aaKnown RBP26.93■■□□□ 1.9
AP004608.1-202ENST00000533390 BICC1Q9H694 974 aaKnown RBP26.93■■□□□ 1.9
AP004608.1-202ENST00000533390 OS9Q13438 667 aaPredicted RBP26.92■■□□□ 1.9
AP004608.1-202ENST00000533390 RHPN1Q8TCX5 695 aa26.92■■□□□ 1.9
AP004608.1-202ENST00000533390 DAXXQ9UER7 740 aaPredicted RBP26.92■■□□□ 1.9
AP004608.1-202ENST00000533390 ATP5J2-PTCD1G3V325 749 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 MX1P20591 662 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 TBC1D9Q6ZT07 1266 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 VPS72Q15906 364 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 KAZALD1Q96I82 304 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 C22orf23Q9BZE7 217 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 SALL3Q9BXA9 1300 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 MARCH10Q8NA82 808 aaPredicted RBP26.9■■□□□ 1.9
AP004608.1-202ENST00000533390 IL1RAPL2Q9NP60 686 aa26.89■■□□□ 1.9
AP004608.1-202ENST00000533390 BCL9LQ86UU0 1499 aa26.89■■□□□ 1.9
AP004608.1-202ENST00000533390 A0A087WZG4 1122 aa26.89■■□□□ 1.89
AP004608.1-202ENST00000533390 A0A0G2JS52 829 aa26.89■■□□□ 1.89
AP004608.1-202ENST00000533390 ZBTB3Q9H5J0 574 aa26.89■■□□□ 1.89
AP004608.1-202ENST00000533390 ERC1Q8IUD2 1116 aa26.88■■□□□ 1.89
AP004608.1-202ENST00000533390 ZNF330Q9Y3S2 320 aaPredicted RBP26.88■■□□□ 1.89
AP004608.1-202ENST00000533390 COL15A1P39059 1388 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 SDSP20132 328 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 CASC1Q6TDU7 716 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 UBE3BQ7Z3V4 1068 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 KIF6Q6ZMV9 814 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 FNBP4Q8N3X1 1017 aaPredicted RBP26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 CWC25Q9NXE8 425 aaPredicted RBP26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 STAP2Q9UGK3 403 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 AOX1Q06278 1338 aa26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 FAM98CQ17RN3 349 aaKnown RBP26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 ACSBG1Q96GR2 724 aa26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 TJP1Q07157 1748 aa26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 TUBGCP6Q96RT7 1819 aa26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 CYP19A1P11511 503 aaPredicted RBP26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 CCDC191Q8NCU4 936 aa26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 SLC4A9Q96Q91 983 aa26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 PA2G4Q9UQ80 394 aaKnown RBP26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 G3BP1Q13283 466 aaKnown RBP eCLIP26.84■■□□□ 1.89
AP004608.1-202ENST00000533390 USP21Q9UK80 565 aa26.83■■□□□ 1.89
AP004608.1-202ENST00000533390 NUTM1Q86Y26 1132 aa26.83■■□□□ 1.88
AP004608.1-202ENST00000533390 CLASRPQ8N2M8 674 aaKnown RBP26.83■■□□□ 1.88
AP004608.1-202ENST00000533390 JARID2Q92833 1246 aaPredicted RBP26.83■■□□□ 1.88
AP004608.1-202ENST00000533390 H7C1W4 665 aa26.82■■□□□ 1.88
AP004608.1-202ENST00000533390 BECN1Q14457 450 aa26.82■■□□□ 1.88
AP004608.1-202ENST00000533390 EPHA10Q5JZY3 1008 aa26.82■■□□□ 1.88
AP004608.1-202ENST00000533390 CASP7P55210 303 aa26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 TSHZ3Q63HK5 1081 aa26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 RABL6Q3YEC7 729 aaPredicted RBP26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 ARXQ96QS3 562 aa26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 TCIRG1Q13488 830 aa26.8■■□□□ 1.88
AP004608.1-202ENST00000533390 MEX3CQ5U5Q3 659 aaKnown RBP26.8■■□□□ 1.88
AP004608.1-202ENST00000533390 RBM25P49756 843 aaKnown RBP26.79■■□□□ 1.88
AP004608.1-202ENST00000533390 MYT1Q01538 1121 aa26.79■■□□□ 1.88
AP004608.1-202ENST00000533390 ISCA1Q9BUE6 129 aa26.79■■□□□ 1.88
AP004608.1-202ENST00000533390 MAP3K15Q6ZN16 1313 aa26.78■■□□□ 1.88
AP004608.1-202ENST00000533390 ZBTB1Q9Y2K1 713 aa26.78■■□□□ 1.88
AP004608.1-202ENST00000533390 AK9Q5TCS8 1911 aa26.78■■□□□ 1.88
AP004608.1-202ENST00000533390 TRIM6-TRIM34B2RNG4 842 aa26.77■■□□□ 1.88
AP004608.1-202ENST00000533390 SMARCC1Q92922 1105 aaPredicted RBP26.77■■□□□ 1.88
AP004608.1-202ENST00000533390 HSPA1LP34931 641 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 ATP6V1AP38606 617 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 IL6STP40189 918 aaPredicted RBP26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 SLC4A3P48751 1232 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 HSP90AB3PQ58FF7 597 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 SIL1Q9H173 461 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 COPRSQ9NQ92 184 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 TTC41PQ6P2S7 1318 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 ANKRD36CQ5JPF3 1778 aa26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 CICQ96RK0 1608 aaPredicted RBP26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 IFIT2P09913 472 aaKnown RBP26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 TRIM28Q13263 835 aaKnown RBP26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 GIGYF2Q6Y7W6 1299 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms