RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 C9orf78Q9NZ63 289 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 TBC1D2BQ9UPU7 963 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 BECN2A8MW95 431 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 CDC45O75419 566 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 ATP6V1AP38606 617 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 TAF7Q15545 349 aaPredicted RBP8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 TMCO3Q6UWJ1 677 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 ATP5J2-PTCD1G3V325 749 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 APBA3O96018 575 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 TMX1Q9H3N1 280 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 PAXBP1Q9Y5B6 917 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 ERBB3P21860 1342 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 AMOTQ4VCS5 1084 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 ZNF397Q8NF99 534 aaPredicted RBP8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
TGFBR3-209ENST00000532540 PARD3Q8TEW0 1356 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 SLFN5Q08AF3 891 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 UNC5CLQ8IV45 518 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 C8orf58Q8NAV2 365 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 TRPC5Q9UL62 973 aaPredicted RBP8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 MYO5BQ9ULV0 1848 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 H0YHG0 523 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 ATP2B3Q16720 1220 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 PRAMEF22A3QJZ6 481 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 CCDC91Q7Z6B0 441 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 ASAP1Q9ULH1 1129 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 NOB1Q9ULX3 412 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 TNNQ9UQP3 1299 aa8.03□□□□□ -1.12
TGFBR3-209ENST00000532540 SBNO1A3KN83 1393 aa8.02□□□□□ -1.12
TGFBR3-209ENST00000532540 TTC31Q49AM3 519 aaPredicted RBP8.02□□□□□ -1.12
TGFBR3-209ENST00000532540 CCDC191Q8NCU4 936 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 TULP4Q9NRJ4 1543 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 A1BGP04217 495 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 CCDC192P0DO97 292 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 PTPN14Q15678 1187 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 UBXN4Q92575 508 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 ACBD3Q9H3P7 528 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
TGFBR3-209ENST00000532540 GORABQ5T7V8 394 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 IL17REQ8NFR9 667 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 A0A1B0GUL7 405 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 SMTNL1A8MU46 457 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 NEXNQ0ZGT2 675 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 MSL1Q68DK7 614 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 KIF18AQ8NI77 898 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 SSH1Q8WYL5 1049 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 TFCP2L1Q9NZI6 479 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 NSD2O96028 1365 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 ARHGAP23Q9P227 1491 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 FILIP1Q7Z7B0 1213 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 CNPY4Q8N129 248 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 ATP7BP35670 1465 aa8.01□□□□□ -1.13
TGFBR3-209ENST00000532540 KIF2AO00139 706 aaPredicted RBP8□□□□□ -1.13
TGFBR3-209ENST00000532540 ZNF496Q96IT1 587 aaPredicted RBP8□□□□□ -1.13
TGFBR3-209ENST00000532540 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
TGFBR3-209ENST00000532540 WDR17Q8IZU2 1322 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 RNMTO43148 476 aaKnown RBP8□□□□□ -1.13
TGFBR3-209ENST00000532540 MCM2P49736 904 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 HSP90AB3PQ58FF7 597 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 DNAJC10Q8IXB1 793 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 ZBTB9Q96C00 473 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 DRC1Q96MC2 740 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 ADGRB1O14514 1584 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 ZC3H13Q5T200 1668 aaKnown RBP8□□□□□ -1.13
TGFBR3-209ENST00000532540 MST1RQ04912 1400 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 CPS1P31327 1500 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 LRRC7Q96NW7 1537 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 TRPM1Q7Z4N2 1603 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 CYP27B1O15528 508 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 MNAT1P51948 309 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 AKAP4Q5JQC9 854 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 DNAAF4Q8WXU2 420 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 SIL1Q9H173 461 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 CHPF2Q9P2E5 772 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 JCADQ9P266 1359 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 REREQ9P2R6 1566 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 PTCH1Q13635 1447 aa8□□□□□ -1.13
TGFBR3-209ENST00000532540 SSR1P43307 286 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 LMAN1P49257 510 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 CCDC183Q5T5S1 534 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 KRT27Q7Z3Y8 459 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 C17orf53Q8N3J3 647 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 GJD4Q96KN9 370 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 LRRFIP2Q9Y608 721 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 STARD3NLO95772 234 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 CT47A1Q5JQC4 288 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 TNS3Q68CZ2 1445 aa7.99□□□□□ -1.13
TGFBR3-209ENST00000532540 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms