RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
CHD7-211ENST00000532149 C22orf23Q9BZE7 217 aa15.14■□□□□ 0.01
CHD7-211ENST00000532149 STAP2Q9UGK3 403 aa15.14■□□□□ 0.01
CHD7-211ENST00000532149 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
CHD7-211ENST00000532149 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
CHD7-211ENST00000532149 PLCH1Q4KWH8 1693 aa15.13■□□□□ 0.01
CHD7-211ENST00000532149 PDIA6Q15084 440 aa15.13■□□□□ 0.01
CHD7-211ENST00000532149 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
CHD7-211ENST00000532149 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
CHD7-211ENST00000532149 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
CHD7-211ENST00000532149 GRM8O00222 908 aa15.12■□□□□ 0.01
CHD7-211ENST00000532149 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
CHD7-211ENST00000532149 PAPPAQ13219 1627 aa15.11■□□□□ 0.01
CHD7-211ENST00000532149 REC8O95072 547 aa15.11■□□□□ 0.01
CHD7-211ENST00000532149 PLBD2Q8NHP8 589 aa15.11■□□□□ 0.01
CHD7-211ENST00000532149 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
CHD7-211ENST00000532149 BTG4Q9NY30 223 aa15.11■□□□□ 0.01
CHD7-211ENST00000532149 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
CHD7-211ENST00000532149 TNS2Q63HR2 1409 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 EXOC5O00471 708 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 SRGAP3O43295 1099 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 PDE1AP54750 535 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 TICAM2Q86XR7 235 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
CHD7-211ENST00000532149 DISP2A7MBM2 1401 aa15.09■□□□□ 0.01
CHD7-211ENST00000532149 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
CHD7-211ENST00000532149 ERC2O15083 957 aa15.08■□□□□ 0
CHD7-211ENST00000532149 SURF6O75683 361 aaKnown RBP15.08■□□□□ 0
CHD7-211ENST00000532149 STARD3NLO95772 234 aa15.08■□□□□ 0
CHD7-211ENST00000532149 MX1P20591 662 aa15.08■□□□□ 0
CHD7-211ENST00000532149 SLC39A6Q13433 755 aa15.08■□□□□ 0
CHD7-211ENST00000532149 COPS6Q7L5N1 327 aa15.08■□□□□ 0
CHD7-211ENST00000532149 SNX21Q969T3 373 aa15.08■□□□□ 0
CHD7-211ENST00000532149 MS4A3Q96HJ5 214 aa15.08■□□□□ 0
CHD7-211ENST00000532149 PHLPP1O60346 1717 aa15.08■□□□□ 0
CHD7-211ENST00000532149 NWD2Q9ULI1 1742 aa15.08■□□□□ 0
CHD7-211ENST00000532149 PNMA6EA0A0J9YXQ4 647 aa15.07■□□□□ 0
CHD7-211ENST00000532149 NEURL1BA8MQ27 555 aa15.07■□□□□ 0
CHD7-211ENST00000532149 SEC24BO95487 1268 aa15.07■□□□□ 0
CHD7-211ENST00000532149 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
CHD7-211ENST00000532149 GCKRQ14397 625 aa15.07■□□□□ 0
CHD7-211ENST00000532149 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
CHD7-211ENST00000532149 CLASRPQ8N2M8 674 aaKnown RBP15.07■□□□□ 0
CHD7-211ENST00000532149 XAGE3Q8WTP9 111 aa15.07■□□□□ 0
CHD7-211ENST00000532149 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
CHD7-211ENST00000532149 SALL3Q9BXA9 1300 aa15.07■□□□□ 0
CHD7-211ENST00000532149 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
CHD7-211ENST00000532149 C5P01031 1676 aa15.06■□□□□ 0
CHD7-211ENST00000532149 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
CHD7-211ENST00000532149 MFAP1P55081 439 aaKnown RBP15.06■□□□□ 0
CHD7-211ENST00000532149 LRP10Q7Z4F1 713 aa15.06■□□□□ 0
CHD7-211ENST00000532149 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
CHD7-211ENST00000532149 USP16Q9Y5T5 823 aa15.06■□□□□ 0
CHD7-211ENST00000532149 TRIM28Q13263 835 aaKnown RBP15.05■□□□□ -0
CHD7-211ENST00000532149 BARGINQ6ZT62 677 aa15.05■□□□□ -0
CHD7-211ENST00000532149 CCDC191Q8NCU4 936 aa15.05■□□□□ -0
CHD7-211ENST00000532149 RHPN1Q8TCX5 695 aa15.05■□□□□ -0
CHD7-211ENST00000532149 EXOC6BQ9Y2D4 811 aa15.05■□□□□ -0
CHD7-211ENST00000532149 COL16A1Q07092 1604 aaPredicted RBP15.05■□□□□ -0
CHD7-211ENST00000532149 KCPQ6ZWJ8 1503 aa15.04■□□□□ -0
CHD7-211ENST00000532149 GSPT1P15170 499 aaKnown RBP15.04■□□□□ -0
CHD7-211ENST00000532149 SDSP20132 328 aa15.04■□□□□ -0
CHD7-211ENST00000532149 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -09e-7■□□□□ 8
CHD7-211ENST00000532149 PROSER3Q2NL68 480 aa15.04■□□□□ -0
CHD7-211ENST00000532149 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
CHD7-211ENST00000532149 ATG3Q9NT62 314 aa15.04■□□□□ -0
CHD7-211ENST00000532149 FBXO3Q9UK99 471 aa15.04■□□□□ -0
CHD7-211ENST00000532149 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
CHD7-211ENST00000532149 MYL6BP14649 208 aa15.03■□□□□ -0
CHD7-211ENST00000532149 MCCP23508 829 aa15.03■□□□□ -0
CHD7-211ENST00000532149 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
CHD7-211ENST00000532149 OS9Q13438 667 aaPredicted RBP15.03■□□□□ -0
CHD7-211ENST00000532149 HSCBQ8IWL3 235 aa15.03■□□□□ -0
CHD7-211ENST00000532149 WNK3Q9BYP7 1800 aa15.02■□□□□ -0
CHD7-211ENST00000532149 HIP1O00291 1037 aa15.02■□□□□ -0
CHD7-211ENST00000532149 IGKV5-2P06315 115 aa15.02■□□□□ -0
CHD7-211ENST00000532149 RABL6Q3YEC7 729 aaPredicted RBP15.02■□□□□ -0
CHD7-211ENST00000532149 RASEFQ8IZ41 740 aa15.02■□□□□ -0
CHD7-211ENST00000532149 COPRSQ9NQ92 184 aa15.02■□□□□ -0
CHD7-211ENST00000532149 BCL9O00512 1426 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 SPATA31A1Q5TZJ5 1347 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 PRAMEF22A3QJZ6 481 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 ANXA1P04083 346 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 ANAPC15P60006 121 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 RABEP1Q15276 862 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
CHD7-211ENST00000532149 CNTROBQ8N137 903 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 RUFY2Q8WXA3 655 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 MYD88Q99836 296 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
CHD7-211ENST00000532149 GLI3P10071 1580 aa15.01□□□□□ -0.01
CHD7-211ENST00000532149 HSP90B1P14625 803 aaKnown RBP15□□□□□ -0.01
CHD7-211ENST00000532149 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
CHD7-211ENST00000532149 ARFGEF2Q9Y6D5 1785 aa15□□□□□ -0.01
CHD7-211ENST00000532149 H7C1W4 665 aa14.99□□□□□ -0.01
CHD7-211ENST00000532149 RGL2O15211 777 aa14.99□□□□□ -0.01
CHD7-211ENST00000532149 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
CHD7-211ENST00000532149 IFIT2P09913 472 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms