RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ILDR2Q71H61 639 aa24.18■■□□□ 1.46
SMPD1-205ENST00000531303 TMEM57Q8N5G2 664 aa24.18■■□□□ 1.46
SMPD1-205ENST00000531303 ZBTB3Q9H5J0 574 aa24.18■■□□□ 1.46
SMPD1-205ENST00000531303 COG6Q9Y2V7 657 aa24.18■■□□□ 1.46
SMPD1-205ENST00000531303 RPS6KA4O75676 772 aa24.17■■□□□ 1.46
SMPD1-205ENST00000531303 PHF14O94880 888 aa24.17■■□□□ 1.46
SMPD1-205ENST00000531303 FKBP8Q14318 412 aa24.17■■□□□ 1.46
SMPD1-205ENST00000531303 CRBNQ96SW2 442 aa24.17■■□□□ 1.46
SMPD1-205ENST00000531303 RTCBQ9Y3I0 505 aaKnown RBP24.17■■□□□ 1.46
SMPD1-205ENST00000531303 AMIGO3Q86WK7 504 aa24.16■■□□□ 1.46
SMPD1-205ENST00000531303 DZIP3Q86Y13 1208 aaKnown RBP24.16■■□□□ 1.46
SMPD1-205ENST00000531303 DNAAF4Q8WXU2 420 aa24.16■■□□□ 1.46
SMPD1-205ENST00000531303 ABCC4O15439 1325 aa24.16■■□□□ 1.46
SMPD1-205ENST00000531303 ITPRIPQ8IWB1 547 aa24.15■■□□□ 1.46
SMPD1-205ENST00000531303 PLBD2Q8NHP8 589 aa24.15■■□□□ 1.46
SMPD1-205ENST00000531303 COL15A1P39059 1388 aa24.15■■□□□ 1.46
SMPD1-205ENST00000531303 UPF1Q92900 1129 aaKnown RBP eCLIP24.14■■□□□ 1.46
SMPD1-205ENST00000531303 HMGB2P26583 209 aaKnown RBP24.13■■□□□ 1.45
SMPD1-205ENST00000531303 ARFGEF2Q9Y6D5 1785 aa24.13■■□□□ 1.45
SMPD1-205ENST00000531303 A0A087WZG4 1122 aa24.13■■□□□ 1.45
SMPD1-205ENST00000531303 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
SMPD1-205ENST00000531303 EXOC6Q8TAG9 804 aa24.13■■□□□ 1.45
SMPD1-205ENST00000531303 MAP3K15Q6ZN16 1313 aa24.12■■□□□ 1.45
SMPD1-205ENST00000531303 UBR3Q6ZT12 1888 aa24.12■■□□□ 1.45
SMPD1-205ENST00000531303 MYD88Q99836 296 aa24.12■■□□□ 1.45
SMPD1-205ENST00000531303 TFCP2L1Q9NZI6 479 aa24.12■■□□□ 1.45
SMPD1-205ENST00000531303 NUP188Q5SRE5 1749 aa24.11■■□□□ 1.45
SMPD1-205ENST00000531303 MVPQ14764 893 aaKnown RBP24.11■■□□□ 1.45
SMPD1-205ENST00000531303 TRAPPC3LQ5T215 181 aa24.11■■□□□ 1.45
SMPD1-205ENST00000531303 METTL22Q9BUU2 404 aaPredicted RBP24.11■■□□□ 1.45
SMPD1-205ENST00000531303 CCT4P50991 539 aaKnown RBP24.1■■□□□ 1.45
SMPD1-205ENST00000531303 HLFQ16534 295 aa24.1■■□□□ 1.45
SMPD1-205ENST00000531303 INTS3Q68E01 1043 aaKnown RBP24.1■■□□□ 1.45
SMPD1-205ENST00000531303 ARHGEF1Q92888 912 aaKnown RBP24.1■■□□□ 1.45
SMPD1-205ENST00000531303 AKT1S1Q96B36 256 aa24.1■■□□□ 1.45
SMPD1-205ENST00000531303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.09■■□□□ 1.45
SMPD1-205ENST00000531303 ATP5J2-PTCD1G3V325 749 aa24.09■■□□□ 1.45
SMPD1-205ENST00000531303 NEXNQ0ZGT2 675 aa24.09■■□□□ 1.45
SMPD1-205ENST00000531303 SRCIN1Q9C0H9 1055 aa24.09■■□□□ 1.45
SMPD1-205ENST00000531303 BEND3Q5T5X7 828 aa24.08■■□□□ 1.45
SMPD1-205ENST00000531303 ANO8Q9HCE9 1232 aaPredicted RBP24.08■■□□□ 1.45
SMPD1-205ENST00000531303 SRP68Q9UHB9 627 aaKnown RBP24.08■■□□□ 1.45
SMPD1-205ENST00000531303 NUP98P52948 1817 aa24.08■■□□□ 1.44
SMPD1-205ENST00000531303 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
SMPD1-205ENST00000531303 RFC4P35249 363 aa24.07■■□□□ 1.44
SMPD1-205ENST00000531303 CWF19L2Q2TBE0 894 aaKnown RBP24.07■■□□□ 1.44
SMPD1-205ENST00000531303 TUBGCP6Q96RT7 1819 aa24.07■■□□□ 1.44
SMPD1-205ENST00000531303 ERVV-1B6SEH8 477 aa24.07■■□□□ 1.44
SMPD1-205ENST00000531303 ZPR1O75312 459 aa24.07■■□□□ 1.44
SMPD1-205ENST00000531303 STK32BQ9NY57 414 aa24.07■■□□□ 1.44
SMPD1-205ENST00000531303 PXDNLA1KZ92 1463 aa24.06■■□□□ 1.44
SMPD1-205ENST00000531303 AFDNP55196 1824 aaKnown RBP24.06■■□□□ 1.44
SMPD1-205ENST00000531303 MSH5O43196 834 aa24.06■■□□□ 1.44
SMPD1-205ENST00000531303 SSFA2P28290 1259 aa24.06■■□□□ 1.44
SMPD1-205ENST00000531303 USPL1Q5W0Q7 1092 aa24.06■■□□□ 1.44
SMPD1-205ENST00000531303 GIGYF2Q6Y7W6 1299 aaKnown RBP24.06■■□□□ 1.44
SMPD1-205ENST00000531303 DDX19BQ9UMR2 479 aa24.06■■□□□ 1.44
SMPD1-205ENST00000531303 C4AP0C0L4 1744 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 IGKV5-2P06315 115 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 ADRA2BP18089 450 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 TCIRG1Q13488 830 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 LINS1Q8NG48 757 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 NARFQ9UHQ1 456 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
SMPD1-205ENST00000531303 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
SMPD1-205ENST00000531303 GPTP24298 496 aa24.04■■□□□ 1.44
SMPD1-205ENST00000531303 ATP10DQ9P241 1426 aa24.04■■□□□ 1.44
SMPD1-205ENST00000531303 NEURL1BA8MQ27 555 aa24.03■■□□□ 1.44
SMPD1-205ENST00000531303 SLC15A2Q16348 729 aa24.03■■□□□ 1.44
SMPD1-205ENST00000531303 BCORQ6W2J9 1755 aa24.03■■□□□ 1.44
SMPD1-205ENST00000531303 HSP90AB3PQ58FF7 597 aa24.02■■□□□ 1.44
SMPD1-205ENST00000531303 COL23A1Q86Y22 540 aaPredicted RBP24.02■■□□□ 1.44
SMPD1-205ENST00000531303 ZNF652Q9Y2D9 606 aa24.02■■□□□ 1.44
SMPD1-205ENST00000531303 ALDH1L1O75891 902 aa24.01■■□□□ 1.43
SMPD1-205ENST00000531303 MEIS3Q99687 375 aa24.01■■□□□ 1.43
SMPD1-205ENST00000531303 USP42Q9H9J4 1324 aaKnown RBP24.01■■□□□ 1.43
SMPD1-205ENST00000531303 ZBTB7BO15156 539 aaPredicted RBP24■■□□□ 1.43
SMPD1-205ENST00000531303 BICDL1Q6ZP65 573 aa24■■□□□ 1.43
SMPD1-205ENST00000531303 JARID2Q92833 1246 aaPredicted RBP24■■□□□ 1.43
SMPD1-205ENST00000531303 BCL2L12Q9HB09 334 aa24■■□□□ 1.43
SMPD1-205ENST00000531303 ANKRD36CQ5JPF3 1778 aa24■■□□□ 1.43
SMPD1-205ENST00000531303 SCN7AQ01118 1682 aa24■■□□□ 1.43
SMPD1-205ENST00000531303 ISCA1Q9BUE6 129 aa24■■□□□ 1.43
SMPD1-205ENST00000531303 C9orf78Q9NZ63 289 aaPredicted RBP24■■□□□ 1.43
SMPD1-205ENST00000531303 PNPLA7Q6ZV29 1317 aa23.99■■□□□ 1.43
SMPD1-205ENST00000531303 GCKRQ14397 625 aa23.99■■□□□ 1.43
SMPD1-205ENST00000531303 USP44Q9H0E7 712 aa23.99■■□□□ 1.43
SMPD1-205ENST00000531303 CWC25Q9NXE8 425 aaPredicted RBP23.99■■□□□ 1.43
SMPD1-205ENST00000531303 FAM177BA6PVY3 158 aa23.98■■□□□ 1.43
SMPD1-205ENST00000531303 CLEC4GQ6UXB4 293 aa23.98■■□□□ 1.43
SMPD1-205ENST00000531303 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
SMPD1-205ENST00000531303 C1orf115Q9H7X2 142 aa23.98■■□□□ 1.43
SMPD1-205ENST00000531303 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMPD1-205ENST00000531303 RTL5Q5HYW3 569 aaPredicted RBP23.97■■□□□ 1.43
SMPD1-205ENST00000531303 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
SMPD1-205ENST00000531303 ZNF34Q8IZ26 560 aa23.97■■□□□ 1.43
SMPD1-205ENST00000531303 CCDC191Q8NCU4 936 aa23.97■■□□□ 1.43
SMPD1-205ENST00000531303 NLRP10Q86W26 655 aa23.96■■□□□ 1.43
SMPD1-205ENST00000531303 CHMP4BQ9H444 224 aaKnown RBP23.96■■□□□ 1.43
SMPD1-205ENST00000531303 ZBTB40Q9NUA8 1239 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms