RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 KIF5CO60282 957 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 GSTO1P78417 241 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 SPTY2D1Q68D10 685 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-227ENST00000530748 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 HMG20BQ9P0W2 317 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 CCDC194A0A1B0GVG4 234 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 TOP1P11387 765 aaKnown RBP9.82□□□□□ -0.84
CTNND1-227ENST00000530748 TTC22Q5TAA0 569 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-227ENST00000530748 CACNA2D4Q7Z3S7 1137 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 CLIP2Q9UDT6 1046 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 NUP160Q12769 1436 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 CCDC102AQ96A19 550 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 PPIP5K1Q6PFW1 1433 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 EZRP15311 586 aaKnown RBP9.82□□□□□ -0.84
CTNND1-227ENST00000530748 SFPQP23246 707 aaKnown RBP eCLIP9.82□□□□□ -0.841e-8■■■□□ 15.1
CTNND1-227ENST00000530748 KIF5BP33176 963 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 ST5P78524 1137 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 PEG3Q9GZU2 1588 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 C11orf95C9JLR9 678 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-227ENST00000530748 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 STX1AQ16623 288 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 ECHDC1Q9NTX5 307 aa9.82□□□□□ -0.84
CTNND1-227ENST00000530748 AMPD3Q01432 767 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 UBA5Q9GZZ9 404 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 KAT14Q9H8E8 782 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 DDX19AQ9NUU7 478 aaKnown RBP9.81□□□□□ -0.84
CTNND1-227ENST00000530748 ACEP12821 1306 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 GOLIM4O00461 696 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 PDE4BQ07343 736 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 CALML4Q96GE6 196 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 YEATS4O95619 227 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 UQCRFS1P1P0C7P4 283 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 PTPN14Q15678 1187 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 TMEM67Q5HYA8 995 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 FAM114A1Q8IWE2 563 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 NUP88Q99567 741 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-227ENST00000530748 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 SNRPA1P09661 255 aaKnown RBP9.81□□□□□ -0.84
CTNND1-227ENST00000530748 IDI1Q13907 227 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 KLHL10Q6JEL2 608 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 NCOA7Q8NI08 942 aa9.81□□□□□ -0.84
CTNND1-227ENST00000530748 BAG3O95817 575 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 LDHCP07864 332 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 SSFA2P28290 1259 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 CCT2P78371 535 aaKnown RBP9.8□□□□□ -0.84
CTNND1-227ENST00000530748 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
CTNND1-227ENST00000530748 CCDC91Q7Z6B0 441 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 GPTP24298 496 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 ZSCAN30Q86W11 494 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 GPATCH8Q9UKJ3 1502 aaKnown RBP9.8□□□□□ -0.84
CTNND1-227ENST00000530748 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 FSIP1Q8NA03 581 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 SYCP2Q9BX26 1530 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 NEMFO60524 1076 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 USO1O60763 962 aaKnown RBP9.8□□□□□ -0.84
CTNND1-227ENST00000530748 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
CTNND1-227ENST00000530748 CCDC152Q4G0S7 254 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 LRRC27Q9C0I9 530 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 BMP2KLQ5H9B9 411 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 KANK3Q6NY19 840 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 TNPO1Q92973 898 aaKnown RBP9.8□□□□□ -0.84
CTNND1-227ENST00000530748 NEK1Q96PY6 1258 aa9.8□□□□□ -0.84
CTNND1-227ENST00000530748 HLA-DOAP06340 250 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 UBXN4Q92575 508 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 DMRT2Q9Y5R5 561 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 FOXO3O43524 673 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 PDCL2Q8N4E4 241 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 ESPNB1AK53 854 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 TMCO3Q6UWJ1 677 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 CRNKL1Q9BZJ0 848 aaKnown RBP9.79□□□□□ -0.84
CTNND1-227ENST00000530748 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 STX6O43752 255 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 NUCB1Q02818 461 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.79□□□□□ -0.847e-6■□□□□ 8.3
CTNND1-227ENST00000530748 MSH6P52701 1360 aa9.79□□□□□ -0.84
CTNND1-227ENST00000530748 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
CTNND1-227ENST00000530748 GSDMDP57764 484 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 STXBP4Q6ZWJ1 553 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 ALS2CR12Q96Q35 445 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 PLCH2O75038 1416 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 POTEB2H3BUK9 544 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-227ENST00000530748 ARHGAP45Q92619 1136 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 KRT23Q9C075 422 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 ABCC1P33527 1531 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 RIMS2Q9UQ26 1411 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms