RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 AOX1Q06278 1338 aa18.89■□□□□ 0.61
USP35-206ENST00000530535 BRD1O95696 1058 aa18.89■□□□□ 0.61
USP35-206ENST00000530535 TMEM63CQ9P1W3 806 aa18.89■□□□□ 0.61
USP35-206ENST00000530535 NSFL1CQ9UNZ2 370 aaKnown RBP18.89■□□□□ 0.61
USP35-206ENST00000530535 PARP4Q9UKK3 1724 aaKnown RBP18.89■□□□□ 0.61
USP35-206ENST00000530535 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
USP35-206ENST00000530535 SRCIN1Q9C0H9 1055 aa18.88■□□□□ 0.61
USP35-206ENST00000530535 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
USP35-206ENST00000530535 DCAF5Q96JK2 942 aa18.88■□□□□ 0.61
USP35-206ENST00000530535 PDLIM2Q96JY6 352 aa18.88■□□□□ 0.61
USP35-206ENST00000530535 IL25Q9H293 177 aa18.88■□□□□ 0.61
USP35-206ENST00000530535 PCDH11XQ9BZA7 1347 aa18.87■□□□□ 0.61
USP35-206ENST00000530535 PCDH11YQ9BZA8 1340 aa18.87■□□□□ 0.61
USP35-206ENST00000530535 ADAMTS7Q9UKP4 1686 aa18.87■□□□□ 0.61
USP35-206ENST00000530535 KDM6AO15550 1401 aaPredicted RBP18.86■□□□□ 0.61
USP35-206ENST00000530535 SSH3Q8TE77 659 aa18.86■□□□□ 0.61
USP35-206ENST00000530535 RILPL2Q969X0 211 aa18.86■□□□□ 0.61
USP35-206ENST00000530535 INTS4Q96HW7 963 aaKnown RBP18.86■□□□□ 0.61
USP35-206ENST00000530535 ANO2Q9NQ90 1003 aa18.86■□□□□ 0.61
USP35-206ENST00000530535 TRIM6-TRIM34B2RNG4 842 aa18.86■□□□□ 0.61
USP35-206ENST00000530535 MCCP23508 829 aa18.86■□□□□ 0.61
USP35-206ENST00000530535 PLCH1Q4KWH8 1693 aa18.85■□□□□ 0.61
USP35-206ENST00000530535 ANP32BQ92688 251 aaKnown RBP18.85■□□□□ 0.61
USP35-206ENST00000530535 SLC52A2Q9HAB3 445 aa18.85■□□□□ 0.61
USP35-206ENST00000530535 KCNQ3O43525 872 aa18.84■□□□□ 0.61
USP35-206ENST00000530535 UBTFL1P0CB47 393 aaPredicted RBP18.84■□□□□ 0.61
USP35-206ENST00000530535 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
USP35-206ENST00000530535 POLA2Q14181 598 aa18.84■□□□□ 0.61
USP35-206ENST00000530535 FOXD4L5Q5VV16 416 aaPredicted RBP18.84■□□□□ 0.61
USP35-206ENST00000530535 FOXD4L4Q8WXT5 416 aaPredicted RBP18.84■□□□□ 0.61
USP35-206ENST00000530535 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.61
USP35-206ENST00000530535 EPB41L2O43491 1005 aaKnown RBP18.83■□□□□ 0.61
USP35-206ENST00000530535 LRSAM1Q6UWE0 723 aa18.83■□□□□ 0.61
USP35-206ENST00000530535 UBE2Q2Q8WVN8 375 aa18.83■□□□□ 0.61
USP35-206ENST00000530535 HSPA1LP34931 641 aa18.83■□□□□ 0.6
USP35-206ENST00000530535 HS1BP3Q53T59 392 aa18.83■□□□□ 0.6
USP35-206ENST00000530535 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
USP35-206ENST00000530535 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.6
USP35-206ENST00000530535 PHAXQ9H814 394 aaKnown RBP18.83■□□□□ 0.6
USP35-206ENST00000530535 IL1RAPL2Q9NP60 686 aa18.83■□□□□ 0.6
USP35-206ENST00000530535 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.6
USP35-206ENST00000530535 HSPA4P34932 840 aa18.82■□□□□ 0.6
USP35-206ENST00000530535 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
USP35-206ENST00000530535 SLIT2O94813 1529 aa18.82■□□□□ 0.6
USP35-206ENST00000530535 MBD3O95983 291 aa18.82■□□□□ 0.6
USP35-206ENST00000530535 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
USP35-206ENST00000530535 HDGFL1Q5TGJ6 251 aa18.82■□□□□ 0.6
USP35-206ENST00000530535 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
USP35-206ENST00000530535 UPF3BQ9BZI7 483 aaKnown RBP18.82■□□□□ 0.6
USP35-206ENST00000530535 SIPA1L3O60292 1781 aaPredicted RBP18.81■□□□□ 0.6
USP35-206ENST00000530535 SYCE3A1L190 88 aa18.81■□□□□ 0.6
USP35-206ENST00000530535 NRAPQ86VF7 1730 aa18.81■□□□□ 0.6
USP35-206ENST00000530535 DISP2A7MBM2 1401 aa18.81■□□□□ 0.6
USP35-206ENST00000530535 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
USP35-206ENST00000530535 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
USP35-206ENST00000530535 NOL8Q76FK4 1167 aaKnown RBP18.8■□□□□ 0.6
USP35-206ENST00000530535 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
USP35-206ENST00000530535 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
USP35-206ENST00000530535 C8orf37Q96NL8 207 aa18.8■□□□□ 0.6
USP35-206ENST00000530535 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.8■□□□□ 0.6
USP35-206ENST00000530535 NGLY1Q96IV0 654 aa18.8■□□□□ 0.6
USP35-206ENST00000530535 THRAP3Q9Y2W1 955 aaKnown RBP18.8■□□□□ 0.6
USP35-206ENST00000530535 NWD2Q9ULI1 1742 aa18.79■□□□□ 0.6
USP35-206ENST00000530535 HOXB7P09629 217 aa18.79■□□□□ 0.6
USP35-206ENST00000530535 CABP4P57796 275 aa18.79■□□□□ 0.6
USP35-206ENST00000530535 RAD50Q92878 1312 aa18.79■□□□□ 0.6
USP35-206ENST00000530535 ZNF790Q6PG37 636 aa18.79■□□□□ 0.6
USP35-206ENST00000530535 RHPN1Q8TCX5 695 aa18.79■□□□□ 0.6
USP35-206ENST00000530535 NOL7Q9UMY1 257 aaKnown RBP18.79■□□□□ 0.6
USP35-206ENST00000530535 SHANK3Q9BYB0 1731 aa18.78■□□□□ 0.6
USP35-206ENST00000530535 MRC1P22897 1456 aa18.78■□□□□ 0.6
USP35-206ENST00000530535 OFD1O75665 1012 aa18.78■□□□□ 0.6
USP35-206ENST00000530535 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
USP35-206ENST00000530535 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
USP35-206ENST00000530535 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
USP35-206ENST00000530535 SGSM2O43147 1006 aa18.77■□□□□ 0.6
USP35-206ENST00000530535 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.6
USP35-206ENST00000530535 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
USP35-206ENST00000530535 CDCA7Q9BWT1 371 aaPredicted RBP18.77■□□□□ 0.6
USP35-206ENST00000530535 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.6
USP35-206ENST00000530535 EXOC5O00471 708 aa18.77■□□□□ 0.6
USP35-206ENST00000530535 HEG1Q9ULI3 1381 aa18.77■□□□□ 0.59
USP35-206ENST00000530535 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 MSNP26038 577 aaKnown RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 BEND3Q5T5X7 828 aa18.76■□□□□ 0.59
USP35-206ENST00000530535 CHMP4AQ9BY43 222 aa18.76■□□□□ 0.59
USP35-206ENST00000530535 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 GIGYF1O75420 1035 aaPredicted RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 MAP4K4O95819 1239 aaPredicted RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 TPM2P07951 284 aa18.76■□□□□ 0.59
USP35-206ENST00000530535 FNBP4Q8N3X1 1017 aaPredicted RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
USP35-206ENST00000530535 TTC14Q96N46 770 aa18.76■□□□□ 0.59
USP35-206ENST00000530535 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
USP35-206ENST00000530535 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
USP35-206ENST00000530535 LRP6O75581 1613 aa18.75■□□□□ 0.59
USP35-206ENST00000530535 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
USP35-206ENST00000530535 EIF2S2P20042 333 aaKnown RBP18.75■□□□□ 0.59
USP35-206ENST00000530535 ZNF500O60304 480 aaPredicted RBP18.74■□□□□ 0.59
USP35-206ENST00000530535 CHPF2Q9P2E5 772 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms