RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 MSL3Q8N5Y2 521 aaKnown RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 SAMD3Q8N6K7 520 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 BICDL2A1A5D9 508 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 MYL3P08590 195 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 CASP2P42575 452 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 EVA1CP58658 441 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 PLCB3Q01970 1234 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 LCA5Q86VQ0 697 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 HOMER1Q86YM7 354 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 GTF3C2Q8WUA4 911 aaPredicted RBP4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 TYW1Q9NV66 732 aaKnown RBP4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 FEZ2Q9UHY8 353 aaPredicted RBP4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 RPGRIP1LQ68CZ1 1315 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 HIP1RO75146 1068 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 BPNT1O95861 308 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 FDX1P10109 184 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 CD44P16070 742 aaKnown RBP4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 CDC27P30260 824 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 ATN1P54259 1190 aaPredicted RBP4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 ZNF394Q53GI3 561 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 CHPFQ8IZ52 775 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 GGT7Q9UJ14 662 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 ZBBXA8MT70 800 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 GOLGA6L22H0YM25 854 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 TBX3O15119 743 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 PAK3O75914 559 aaPredicted RBP4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 NOS2P35228 1153 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 GNALP38405 381 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 KANSL2Q9H9L4 492 aa4.8□□□□□ -1.64
ARHGEF12-209ENST00000530388 FXR2P51116 673 aaKnown RBP eCLIP4.79□□□□□ -1.645e-8■■■■■ 36.6
ARHGEF12-209ENST00000530388 SF3B2Q13435 895 aaKnown RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 SETDB1Q15047 1291 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 WWC2Q6AWC2 1192 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 NUDT18Q6ZVK8 323 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 CHCHD4Q8N4Q1 142 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 IFRD1O00458 451 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 PRPF40AO75400 957 aaKnown RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 SSR1P43307 286 aaKnown RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 PRPF38BQ5VTL8 546 aaKnown RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 MSL1Q68DK7 614 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 CFAP69A5D8W1 941 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 RACK1P63244 317 aaKnown RBP4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 SWI5Q1ZZU3 235 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 EFCAB2Q5VUJ9 269 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 SULF1Q8IWU6 871 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 TSPAN18Q96SJ8 248 aa4.79□□□□□ -1.64
ARHGEF12-209ENST00000530388 IGHA2P01877 340 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 ANP32AP39687 249 aaKnown RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 PRSS12P56730 875 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 PDE1CQ14123 709 aaPredicted RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 NRBP1Q9UHY1 535 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 PPP4CP60510 307 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 AMPD3Q01432 767 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 PUS10Q3MIT2 529 aaKnown RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 TMC7Q7Z402 723 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 ANKRD42Q8N9B4 389 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 NOD1Q9Y239 953 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 CBFA2T2O43439 604 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 FAM26DQ5JW98 314 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 HS2ST1Q7LGA3 356 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 SMAD5Q99717 465 aaKnown RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 LRRC27Q9C0I9 530 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 IFT122Q9HBG6 1241 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 COLQQ9Y215 455 aaPredicted RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 ENPP3O14638 875 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 FIBPO43427 364 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 ATP1A2P50993 1020 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 VPS72Q15906 364 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 ARSHQ5FYA8 562 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 CC2D1BQ5T0F9 858 aaKnown RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 TRIM50Q86XT4 487 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 RAVER1Q8IY67 606 aaKnown RBP4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 TTC30BQ8N4P2 665 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 RDH13Q8NBN7 331 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 VPS37AQ8NEZ2 397 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 ATRIPQ8WXE1 791 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 TMEM134Q9H6X4 195 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 KLF15Q9UIH9 416 aa4.78□□□□□ -1.64
ARHGEF12-209ENST00000530388 MTMR2Q13614 643 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 NAA30Q147X3 362 aaPredicted RBP4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 TOMM20Q15388 145 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 OGFOD1Q8N543 542 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 ATL2Q8NHH9 583 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 PDZRN3Q9UPQ7 1066 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 CCDC96Q2M329 555 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 ZSCAN30Q86W11 494 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 RPGRQ92834 1020 aaKnown RBP4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 EPAS1Q99814 870 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 MCM8Q9UJA3 840 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 BIRC3Q13489 604 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 ALFQ53S48 1182 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 MCF2L2Q86YR7 1114 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 RELTQ969Z4 430 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 GMLQ99445 158 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 SIRPGQ9P1W8 387 aa4.77□□□□□ -1.65
ARHGEF12-209ENST00000530388 POTEFA5A3E0 1075 aa4.76□□□□□ -1.65
ARHGEF12-209ENST00000530388 SFI1A8K8P3 1242 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms