RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 RGPD4Q7Z3J3 1758 aa8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 ADAMTS7Q9UKP4 1686 aa8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 SCN11AQ9UI33 1791 aa8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 A6NJR5 290 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 BTBD11A6QL63 1104 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 CCER2I3L3R5 266 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 TRAK2O60296 914 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 ITPK1Q13572 414 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 ZNF790Q6PG37 636 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 KRI1Q8N9T8 703 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 STK32BQ9NY57 414 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 TRIM35Q9UPQ4 493 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 RRP7AQ9Y3A4 280 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 POTEFA5A3E0 1075 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 PDE4DQ08499 809 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 LMOD3Q0VAK6 560 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 FAM9BQ8IZU0 186 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 CCDC136Q96JN2 1154 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 THUMPD2Q9BTF0 503 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 RREB1Q92766 1687 aa8.19□□□□□ -1.1
ATPAF1-209ENST00000529214 MRC1P22897 1456 aa8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 LY75O60449 1722 aa8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 KCNQ3O43525 872 aa8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 CHRM1P11229 460 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 RBM25P49756 843 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 RC3H1Q5TC82 1133 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 TTC5Q8N0Z6 440 aa8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 LINC00116Q8NCU8 138 aa8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 MIS18AQ9NYP9 233 aa8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 BCCIPQ9P287 314 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATPAF1-209ENST00000529214 TRIM66O15016 1216 aa8.17□□□□□ -1.1
ATPAF1-209ENST00000529214 AAMPQ13685 434 aa8.17□□□□□ -1.1
ATPAF1-209ENST00000529214 ZNF496Q96IT1 587 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-209ENST00000529214 BABAM1Q9NWV8 329 aa8.17□□□□□ -1.1
ATPAF1-209ENST00000529214 TFCP2L1Q9NZI6 479 aa8.17□□□□□ -1.1
ATPAF1-209ENST00000529214 NUP188Q5SRE5 1749 aa8.17□□□□□ -1.1
ATPAF1-209ENST00000529214 MFAP1P55081 439 aaKnown RBP8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 CCDC27Q2M243 656 aa8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 DNAJC10Q8IXB1 793 aa8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 FAM212AQ96EL1 285 aa8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 FMNL2Q96PY5 1086 aa8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 TEX13AQ9BXU3 409 aaPredicted RBP8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 PDGFDQ9GZP0 370 aaPredicted RBP8.16□□□□□ -1.1
ATPAF1-209ENST00000529214 HEG1Q9ULI3 1381 aa8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 PNPLA7Q6ZV29 1317 aa8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 CHL1O00533 1208 aa8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 CYP19A1P11511 503 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 MMRN1Q13201 1228 aa8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 FLAD1Q8NFF5 587 aa8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-209ENST00000529214 PAPPAQ13219 1627 aa8.15□□□□□ -1.11
ATPAF1-209ENST00000529214 CNTNAP4Q9C0A0 1308 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 RPS6KA4O75676 772 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 STARD3NLO95772 234 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 SNRPA1P09661 255 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 SSFA2P28290 1259 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 CRKLP46109 303 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 EIF4A1P60842 406 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 AMIGO3Q86WK7 504 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 COL23A1Q86Y22 540 aaPredicted RBP8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 WWC1Q8IX03 1113 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 SLC16A10Q8TF71 515 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 CLUAP1Q96AJ1 413 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 FAM117AQ9C073 453 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 TSPYL4Q9UJ04 414 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 RTCBQ9Y3I0 505 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 USP16Q9Y5T5 823 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 DLG5Q8TDM6 1919 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 KCPQ6ZWJ8 1503 aa8.14□□□□□ -1.11
ATPAF1-209ENST00000529214 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 GNPATO15228 680 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 ZNF853P0CG23 659 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 CALD1Q05682 793 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 SMIM5Q71RC9 77 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 FOXD4L4Q8WXT5 416 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 SIPA1L3O60292 1781 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 ZNF831Q5JPB2 1677 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 A0A0U1RQG5 324 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 SEC24BO95487 1268 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 TIE1P35590 1138 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 GNAI1P63096 354 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 TSPYL2Q9H2G4 693 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 CCDC87Q9NVE4 849 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 IFT57Q9NWB7 429 aa8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-209ENST00000529214 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
ATPAF1-209ENST00000529214 PHF14O94880 888 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms