RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-211ENST00000528840 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTP4A2-211ENST00000528840 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
PTP4A2-211ENST00000528840 CNKSR1Q969H4 720 aa15.21■□□□□ 0.03
PTP4A2-211ENST00000528840 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
PTP4A2-211ENST00000528840 STYK1Q6J9G0 422 aa15.2■□□□□ 0.02
PTP4A2-211ENST00000528840 MCM10Q7L590 875 aa15.2■□□□□ 0.02
PTP4A2-211ENST00000528840 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
PTP4A2-211ENST00000528840 CEMIPQ8WUJ3 1361 aa15.2■□□□□ 0.02
PTP4A2-211ENST00000528840 CCDC88AQ3V6T2 1871 aa15.19■□□□□ 0.02
PTP4A2-211ENST00000528840 SRGNP10124 158 aa15.19■□□□□ 0.02
PTP4A2-211ENST00000528840 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
PTP4A2-211ENST00000528840 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
PTP4A2-211ENST00000528840 MASTLQ96GX5 879 aa15.19■□□□□ 0.02
PTP4A2-211ENST00000528840 TAOK3Q9H2K8 898 aa15.19■□□□□ 0.02
PTP4A2-211ENST00000528840 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
PTP4A2-211ENST00000528840 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
PTP4A2-211ENST00000528840 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
PTP4A2-211ENST00000528840 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
PTP4A2-211ENST00000528840 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
PTP4A2-211ENST00000528840 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
PTP4A2-211ENST00000528840 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
PTP4A2-211ENST00000528840 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
PTP4A2-211ENST00000528840 DLEC1Q9Y238 1755 aa15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 TAF7Q15545 349 aaPredicted RBP15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 ANKRD31Q8N7Z5 1873 aa15.16■□□□□ 0.02
PTP4A2-211ENST00000528840 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
PTP4A2-211ENST00000528840 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
PTP4A2-211ENST00000528840 SIPA1L3O60292 1781 aaPredicted RBP15.14■□□□□ 0.01
PTP4A2-211ENST00000528840 HTATSF1O43719 755 aaKnown RBP15.14■□□□□ 0.01
PTP4A2-211ENST00000528840 CAPN15O75808 1086 aa15.14■□□□□ 0.01
PTP4A2-211ENST00000528840 NPR1P16066 1061 aa15.14■□□□□ 0.01
PTP4A2-211ENST00000528840 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
PTP4A2-211ENST00000528840 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
PTP4A2-211ENST00000528840 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
PTP4A2-211ENST00000528840 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
PTP4A2-211ENST00000528840 POTEJP0CG39 1038 aa15.13■□□□□ 0.01
PTP4A2-211ENST00000528840 GTF2E1P29083 439 aaPredicted RBP15.13■□□□□ 0.01
PTP4A2-211ENST00000528840 HLFQ16534 295 aa15.13■□□□□ 0.01
PTP4A2-211ENST00000528840 TNS4Q8IZW8 715 aa15.13■□□□□ 0.01
PTP4A2-211ENST00000528840 HSPA1AP0DMV8 641 aaKnown RBP15.12■□□□□ 0.01
PTP4A2-211ENST00000528840 HSPA1BP0DMV9 641 aaKnown RBP15.12■□□□□ 0.01
PTP4A2-211ENST00000528840 CCDC93Q567U6 631 aa15.12■□□□□ 0.01
PTP4A2-211ENST00000528840 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
PTP4A2-211ENST00000528840 KLRG2A4D1S0 409 aaPredicted RBP15.11■□□□□ 0.01
PTP4A2-211ENST00000528840 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
PTP4A2-211ENST00000528840 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
PTP4A2-211ENST00000528840 FER1L6Q2WGJ9 1857 aa15.11■□□□□ 0.01
PTP4A2-211ENST00000528840 SCN7AQ01118 1682 aa15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 TIAM2Q8IVF5 1701 aa15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 NEFMP07197 916 aa15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 FKBP4Q02790 459 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 RTKN2Q8IZC4 609 aa15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 RRP7AQ9Y3A4 280 aaKnown RBP15.1■□□□□ 0.01
PTP4A2-211ENST00000528840 COL11A2P13942 1736 aaPredicted RBP15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 IQCA1LA6NCM1 817 aa15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 TAF1DQ9H5J8 278 aaPredicted RBP15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
PTP4A2-211ENST00000528840 DICER1Q9UPY3 1922 aaKnown RBP15.08■□□□□ 0
PTP4A2-211ENST00000528840 RGL2O15211 777 aa15.08■□□□□ 0
PTP4A2-211ENST00000528840 EAPPQ56P03 285 aaPredicted RBP15.08■□□□□ 0
PTP4A2-211ENST00000528840 NUTM1Q86Y26 1132 aa15.08■□□□□ 0
PTP4A2-211ENST00000528840 MYL6BP14649 208 aa15.07■□□□□ 0
PTP4A2-211ENST00000528840 LDHDQ86WU2 507 aa15.07■□□□□ 0
PTP4A2-211ENST00000528840 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
PTP4A2-211ENST00000528840 CACNA1SQ13698 1873 aa15.06■□□□□ 0
PTP4A2-211ENST00000528840 ERVV-1B6SEH8 477 aa15.06■□□□□ 0
PTP4A2-211ENST00000528840 IARSP41252 1262 aaKnown RBP15.06■□□□□ 0
PTP4A2-211ENST00000528840 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
PTP4A2-211ENST00000528840 L3MBTL3Q96JM7 780 aaPredicted RBP15.06■□□□□ 0
PTP4A2-211ENST00000528840 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
PTP4A2-211ENST00000528840 NYXQ9GZU5 481 aa15.06■□□□□ 0
PTP4A2-211ENST00000528840 HACL1Q9UJ83 578 aa15.06■□□□□ 0
PTP4A2-211ENST00000528840 ZNF541Q9H0D2 1346 aa15.06■□□□□ 0
PTP4A2-211ENST00000528840 ITGBL1O95965 494 aaPredicted RBP15.05■□□□□ -0
PTP4A2-211ENST00000528840 GPTP24298 496 aa15.05■□□□□ -0
PTP4A2-211ENST00000528840 EPHX2P34913 555 aa15.05■□□□□ -0
PTP4A2-211ENST00000528840 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ -0
PTP4A2-211ENST00000528840 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
PTP4A2-211ENST00000528840 BCORQ6W2J9 1755 aa15.04■□□□□ -0
PTP4A2-211ENST00000528840 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
PTP4A2-211ENST00000528840 FZD9O00144 591 aa15.04■□□□□ -0
PTP4A2-211ENST00000528840 TCERG1O14776 1098 aaKnown RBP15.04■□□□□ -0
PTP4A2-211ENST00000528840 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
PTP4A2-211ENST00000528840 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
PTP4A2-211ENST00000528840 ZBTB3Q9H5J0 574 aa15.04■□□□□ -0
PTP4A2-211ENST00000528840 PASKQ96RG2 1323 aa15.03■□□□□ -0
PTP4A2-211ENST00000528840 TMEM88BA6NKF7 163 aa15.03■□□□□ -0
PTP4A2-211ENST00000528840 NFE2L2Q16236 605 aa15.03■□□□□ -0
PTP4A2-211ENST00000528840 SUSD4Q5VX71 490 aa15.03■□□□□ -0
PTP4A2-211ENST00000528840 JDP2Q8WYK2 163 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms