RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 MRS2Q9HD23 443 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
CCDC90B-208ENST00000527025 CHL1O00533 1208 aa11.66□□□□□ -0.54
CCDC90B-208ENST00000527025 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.54
CCDC90B-208ENST00000527025 LAMB4A4D0S4 1761 aa11.65□□□□□ -0.54
CCDC90B-208ENST00000527025 IL6STP40189 918 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-208ENST00000527025 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
CCDC90B-208ENST00000527025 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.55
CCDC90B-208ENST00000527025 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 YBX3P16989 372 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 NFIXQ14938 502 aa11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 TSPYL4Q9UJ04 414 aa11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-208ENST00000527025 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 ZPR1O75312 459 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 CAMTA2O94983 1202 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 PDIA6Q15084 440 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 LAS1LQ9Y4W2 734 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
CCDC90B-208ENST00000527025 C10orf71Q711Q0 1435 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 KCNA3P22001 575 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 MBIPQ9NS73 344 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 BABAM1Q9NWV8 329 aa11.62□□□□□ -0.55
CCDC90B-208ENST00000527025 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 ANXA1P04083 346 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 HLFQ16534 295 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
CCDC90B-208ENST00000527025 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 A0A087WZG4 1122 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 MIER1Q8N108 512 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 NECTIN2Q92692 538 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
CCDC90B-208ENST00000527025 ANKRD31Q8N7Z5 1873 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 SERPINB2P05120 415 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 MYL6BP14649 208 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 DPEP1P16444 411 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 EIF2S2P20042 333 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-208ENST00000527025 NUP98P52948 1817 aa11.58□□□□□ -0.56
CCDC90B-208ENST00000527025 CHRNA5P30532 468 aa11.58□□□□□ -0.56
CCDC90B-208ENST00000527025 GPR162Q16538 588 aa11.58□□□□□ -0.56
CCDC90B-208ENST00000527025 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-208ENST00000527025 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
CCDC90B-208ENST00000527025 ELL2O00472 640 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-208ENST00000527025 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
CCDC90B-208ENST00000527025 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
CCDC90B-208ENST00000527025 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-208ENST00000527025 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
CCDC90B-208ENST00000527025 TGFB2P61812 414 aa11.56□□□□□ -0.56
CCDC90B-208ENST00000527025 DUSP27Q5VZP5 1158 aa11.56□□□□□ -0.56
CCDC90B-208ENST00000527025 PRR5LQ6MZQ0 368 aa11.56□□□□□ -0.56
CCDC90B-208ENST00000527025 GNAI1P63096 354 aa11.55□□□□□ -0.56
CCDC90B-208ENST00000527025 CLEC4GQ6UXB4 293 aa11.55□□□□□ -0.56
CCDC90B-208ENST00000527025 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
CCDC90B-208ENST00000527025 CHPF2Q9P2E5 772 aa11.55□□□□□ -0.56
CCDC90B-208ENST00000527025 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-208ENST00000527025 CHD4Q14839 1912 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 COPS6Q7L5N1 327 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 SETDB2Q96T68 719 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
CCDC90B-208ENST00000527025 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 ERVV-1B6SEH8 477 aa11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 ZNF34Q8IZ26 560 aa11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 NIP7Q9Y221 180 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
CCDC90B-208ENST00000527025 RGL2O15211 777 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 GPTP24298 496 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 YY1P25490 414 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 HDGFL1Q5TGJ6 251 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 ZNF428Q96B54 188 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms