RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 DDX21Q9NR30 783 aaKnown RBP eCLIP21.02■□□□□ 0.96
SSSCA1-202ENST00000526433 SCN7AQ01118 1682 aa21.02■□□□□ 0.95
SSSCA1-202ENST00000526433 AFDNP55196 1824 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-202ENST00000526433 KIF6Q6ZMV9 814 aa21.01■□□□□ 0.95
SSSCA1-202ENST00000526433 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-202ENST00000526433 C10orf71Q711Q0 1435 aa21.01■□□□□ 0.95
SSSCA1-202ENST00000526433 MAP3K15Q6ZN16 1313 aa21.01■□□□□ 0.95
SSSCA1-202ENST00000526433 BCORQ6W2J9 1755 aa21■□□□□ 0.95
SSSCA1-202ENST00000526433 KIF13BQ9NQT8 1826 aa21■□□□□ 0.95
SSSCA1-202ENST00000526433 A0A0G2JLW4 131 aa21■□□□□ 0.95
SSSCA1-202ENST00000526433 CHPF2Q9P2E5 772 aa21■□□□□ 0.95
SSSCA1-202ENST00000526433 COPS6Q7L5N1 327 aa20.99■□□□□ 0.95
SSSCA1-202ENST00000526433 TSPYL6Q8N831 410 aa20.99■□□□□ 0.95
SSSCA1-202ENST00000526433 ZBTB3Q9H5J0 574 aa20.99■□□□□ 0.95
SSSCA1-202ENST00000526433 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
SSSCA1-202ENST00000526433 DPEP1P16444 411 aa20.98■□□□□ 0.95
SSSCA1-202ENST00000526433 AIMP1Q12904 312 aaKnown RBP20.98■□□□□ 0.95
SSSCA1-202ENST00000526433 XAGE3Q8WTP9 111 aa20.98■□□□□ 0.95
SSSCA1-202ENST00000526433 NIP7Q9Y221 180 aaKnown RBP eCLIP20.98■□□□□ 0.95
SSSCA1-202ENST00000526433 CARMIL3Q8ND23 1372 aa20.97■□□□□ 0.95
SSSCA1-202ENST00000526433 NUP98P52948 1817 aa20.97■□□□□ 0.95
SSSCA1-202ENST00000526433 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
SSSCA1-202ENST00000526433 NRXN2Q9P2S2 1712 aa20.97■□□□□ 0.95
SSSCA1-202ENST00000526433 N4BP2Q86UW6 1770 aaPredicted RBP20.96■□□□□ 0.95
SSSCA1-202ENST00000526433 CHMP4AQ9BY43 222 aa20.96■□□□□ 0.95
SSSCA1-202ENST00000526433 HYPKQ9NX55 129 aa20.96■□□□□ 0.95
SSSCA1-202ENST00000526433 WWC3Q9ULE0 1092 aa20.96■□□□□ 0.95
SSSCA1-202ENST00000526433 PXDNLA1KZ92 1463 aa20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 YBX3P16989 372 aaKnown RBP eCLIP20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 KCNA3P22001 575 aa20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 GOLGA2Q08379 1002 aa20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 PRR5LQ6MZQ0 368 aa20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 GIGYF2Q6Y7W6 1299 aaKnown RBP20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 CCDC24Q8N4L8 307 aa20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
SSSCA1-202ENST00000526433 TWISTNBQ3B726 338 aaPredicted RBP20.94■□□□□ 0.94
SSSCA1-202ENST00000526433 CCDC30Q5VVM6 783 aa20.94■□□□□ 0.94
SSSCA1-202ENST00000526433 NBPF5PQ86XG9 351 aaPredicted RBP20.94■□□□□ 0.94
SSSCA1-202ENST00000526433 ZNF521Q96K83 1311 aa20.94■□□□□ 0.94
SSSCA1-202ENST00000526433 KIAA1551Q9HCM1 1747 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 FAM177BA6PVY3 158 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 NPHP1O15259 732 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 CHRNA5P30532 468 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 TPTE2Q6XPS3 522 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 MYH16Q9H6N6 1097 aa20.93■□□□□ 0.94
SSSCA1-202ENST00000526433 GRIN3BO60391 1043 aa20.92■□□□□ 0.94
SSSCA1-202ENST00000526433 GPTP24298 496 aa20.92■□□□□ 0.94
SSSCA1-202ENST00000526433 EXOSC9Q06265 439 aaKnown RBP20.92■□□□□ 0.94
SSSCA1-202ENST00000526433 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
SSSCA1-202ENST00000526433 BRIP1Q9BX63 1249 aa20.92■□□□□ 0.94
SSSCA1-202ENST00000526433 ST5P78524 1137 aa20.91■□□□□ 0.94
SSSCA1-202ENST00000526433 ANKRD13DQ6ZTN6 518 aa20.91■□□□□ 0.94
SSSCA1-202ENST00000526433 PHAXQ9H814 394 aaKnown RBP20.91■□□□□ 0.94
SSSCA1-202ENST00000526433 PIM2Q9P1W9 311 aa20.91■□□□□ 0.94
SSSCA1-202ENST00000526433 ATP10DQ9P241 1426 aa20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 VAMP4O75379 141 aa20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 PDE6BP35913 854 aa20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 C2CD5Q86YS7 1000 aa20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 PLBD2Q8NHP8 589 aa20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 BCS1LQ9Y276 419 aa20.9■□□□□ 0.94
SSSCA1-202ENST00000526433 H0YIN7 160 aa20.89■□□□□ 0.93
SSSCA1-202ENST00000526433 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-202ENST00000526433 TCIRG1Q13488 830 aa20.89■□□□□ 0.93
SSSCA1-202ENST00000526433 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.93
SSSCA1-202ENST00000526433 SUSD4Q5VX71 490 aa20.89■□□□□ 0.93
SSSCA1-202ENST00000526433 UBN2Q6ZU65 1347 aa20.88■□□□□ 0.93
SSSCA1-202ENST00000526433 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
SSSCA1-202ENST00000526433 NYXQ9GZU5 481 aa20.88■□□□□ 0.93
SSSCA1-202ENST00000526433 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
SSSCA1-202ENST00000526433 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
SSSCA1-202ENST00000526433 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
SSSCA1-202ENST00000526433 PARP10Q53GL7 1025 aa20.87■□□□□ 0.93
SSSCA1-202ENST00000526433 DALRD3Q5D0E6 543 aaKnown RBP20.87■□□□□ 0.93
SSSCA1-202ENST00000526433 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
SSSCA1-202ENST00000526433 RIC3Q7Z5B4 369 aa20.86■□□□□ 0.93
SSSCA1-202ENST00000526433 BRCA1P38398 1863 aaKnown RBP20.86■□□□□ 0.93
SSSCA1-202ENST00000526433 E9PSI1 815 aa20.85■□□□□ 0.93
SSSCA1-202ENST00000526433 SLC4A2P04920 1241 aa20.85■□□□□ 0.93
SSSCA1-202ENST00000526433 SLFN5Q08AF3 891 aa20.85■□□□□ 0.93
SSSCA1-202ENST00000526433 ERFEQ4G0M1 354 aa20.85■□□□□ 0.93
SSSCA1-202ENST00000526433 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
SSSCA1-202ENST00000526433 CHD4Q14839 1912 aa20.84■□□□□ 0.93
SSSCA1-202ENST00000526433 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
SSSCA1-202ENST00000526433 ZNF622Q969S3 477 aaKnown RBP eCLIP20.84■□□□□ 0.93
SSSCA1-202ENST00000526433 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
SSSCA1-202ENST00000526433 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
SSSCA1-202ENST00000526433 UTRNP46939 3433 aa20.84■□□□□ 0.93
SSSCA1-202ENST00000526433 NTSR2O95665 410 aa20.83■□□□□ 0.93
SSSCA1-202ENST00000526433 G2E3Q7L622 706 aa20.83■□□□□ 0.93
SSSCA1-202ENST00000526433 TTLL6Q8N841 843 aa20.83■□□□□ 0.93
SSSCA1-202ENST00000526433 KLRG2A4D1S0 409 aaPredicted RBP20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 ATP5J2-PTCD1G3V325 749 aa20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 DDX58O95786 925 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 SRGNP10124 158 aa20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 YY1P25490 414 aa20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 CACNA1FO60840 1977 aa20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms