RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 NECTIN2Q92692 538 aa25.63■■□□□ 1.69
EXOSC4-202ENST00000525936 MAP3K15Q6ZN16 1313 aa25.63■■□□□ 1.69
EXOSC4-202ENST00000525936 ANXA1P04083 346 aa25.62■■□□□ 1.69
EXOSC4-202ENST00000525936 SERPINB2P05120 415 aa25.62■■□□□ 1.69
EXOSC4-202ENST00000525936 TSPYL6Q8N831 410 aa25.62■■□□□ 1.69
EXOSC4-202ENST00000525936 ZNF652Q9Y2D9 606 aa25.62■■□□□ 1.69
EXOSC4-202ENST00000525936 ELL2O00472 640 aaPredicted RBP25.61■■□□□ 1.69
EXOSC4-202ENST00000525936 TGFB2P61812 414 aa25.61■■□□□ 1.69
EXOSC4-202ENST00000525936 CHPF2Q9P2E5 772 aa25.61■■□□□ 1.69
EXOSC4-202ENST00000525936 DBF4Q9UBU7 674 aaPredicted RBP25.61■■□□□ 1.69
EXOSC4-202ENST00000525936 FANCIQ9NVI1 1328 aa25.61■■□□□ 1.69
EXOSC4-202ENST00000525936 AFDNP55196 1824 aaKnown RBP25.6■■□□□ 1.69
EXOSC4-202ENST00000525936 BICDL1Q6ZP65 573 aa25.6■■□□□ 1.69
EXOSC4-202ENST00000525936 SETDB2Q96T68 719 aa25.6■■□□□ 1.69
EXOSC4-202ENST00000525936 CARMIL3Q8ND23 1372 aa25.59■■□□□ 1.69
EXOSC4-202ENST00000525936 KIF6Q6ZMV9 814 aa25.59■■□□□ 1.69
EXOSC4-202ENST00000525936 COPS6Q7L5N1 327 aa25.59■■□□□ 1.69
EXOSC4-202ENST00000525936 KIAA1551Q9HCM1 1747 aa25.59■■□□□ 1.69
EXOSC4-202ENST00000525936 XAGE3Q8WTP9 111 aa25.57■■□□□ 1.68
EXOSC4-202ENST00000525936 CHMP4AQ9BY43 222 aa25.57■■□□□ 1.68
EXOSC4-202ENST00000525936 HYPKQ9NX55 129 aa25.57■■□□□ 1.68
EXOSC4-202ENST00000525936 PXDNLA1KZ92 1463 aa25.57■■□□□ 1.68
EXOSC4-202ENST00000525936 GIGYF2Q6Y7W6 1299 aaKnown RBP25.56■■□□□ 1.68
EXOSC4-202ENST00000525936 ZBTB3Q9H5J0 574 aa25.56■■□□□ 1.68
EXOSC4-202ENST00000525936 NUP98P52948 1817 aa25.56■■□□□ 1.68
EXOSC4-202ENST00000525936 ATP10DQ9P241 1426 aa25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 KCNA3P22001 575 aa25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 GOLGA2Q08379 1002 aa25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 TWISTNBQ3B726 338 aaPredicted RBP25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 PRR5LQ6MZQ0 368 aa25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 MYH16Q9H6N6 1097 aa25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 NIP7Q9Y221 180 aaKnown RBP eCLIP25.55■■□□□ 1.68
EXOSC4-202ENST00000525936 CCDC30Q5VVM6 783 aa25.54■■□□□ 1.68
EXOSC4-202ENST00000525936 ZNF34Q8IZ26 560 aa25.54■■□□□ 1.68
EXOSC4-202ENST00000525936 A0A0G2JLW4 131 aa25.53■■□□□ 1.68
EXOSC4-202ENST00000525936 DCAF8L1A6NGE4 600 aa25.53■■□□□ 1.68
EXOSC4-202ENST00000525936 VAMP4O75379 141 aa25.52■■□□□ 1.68
EXOSC4-202ENST00000525936 DPEP1P16444 411 aa25.52■■□□□ 1.68
EXOSC4-202ENST00000525936 EXOSC9Q06265 439 aaKnown RBP25.52■■□□□ 1.68
EXOSC4-202ENST00000525936 AIMP1Q12904 312 aaKnown RBP25.52■■□□□ 1.68
EXOSC4-202ENST00000525936 YBX3P16989 372 aaKnown RBP eCLIP25.51■■□□□ 1.67
EXOSC4-202ENST00000525936 BRIP1Q9BX63 1249 aa25.51■■□□□ 1.67
EXOSC4-202ENST00000525936 N4BP2Q86UW6 1770 aaPredicted RBP25.51■■□□□ 1.67
EXOSC4-202ENST00000525936 GPR162Q16538 588 aa25.5■■□□□ 1.67
EXOSC4-202ENST00000525936 CNBD1Q8NA66 436 aa25.5■■□□□ 1.67
EXOSC4-202ENST00000525936 UBN2Q6ZU65 1347 aa25.49■■□□□ 1.67
EXOSC4-202ENST00000525936 TPTE2Q6XPS3 522 aa25.49■■□□□ 1.67
EXOSC4-202ENST00000525936 ANKRD13DQ6ZTN6 518 aa25.49■■□□□ 1.67
EXOSC4-202ENST00000525936 NBPF5PQ86XG9 351 aaPredicted RBP25.49■■□□□ 1.67
EXOSC4-202ENST00000525936 PLBD2Q8NHP8 589 aa25.49■■□□□ 1.67
EXOSC4-202ENST00000525936 PHAXQ9H814 394 aaKnown RBP25.49■■□□□ 1.67
EXOSC4-202ENST00000525936 E9PSI1 815 aa25.48■■□□□ 1.67
EXOSC4-202ENST00000525936 SLFN5Q08AF3 891 aa25.48■■□□□ 1.67
EXOSC4-202ENST00000525936 ANKRD31Q8N7Z5 1873 aa25.47■■□□□ 1.67
EXOSC4-202ENST00000525936 CHRNA5P30532 468 aa25.47■■□□□ 1.67
EXOSC4-202ENST00000525936 TCIRG1Q13488 830 aa25.47■■□□□ 1.67
EXOSC4-202ENST00000525936 TRMT2AQ8IZ69 625 aaKnown RBP25.47■■□□□ 1.67
EXOSC4-202ENST00000525936 BRCA1P38398 1863 aaKnown RBP25.47■■□□□ 1.67
EXOSC4-202ENST00000525936 IBTKQ9P2D0 1353 aaPredicted RBP25.46■■□□□ 1.67
EXOSC4-202ENST00000525936 GPTP24298 496 aa25.46■■□□□ 1.67
EXOSC4-202ENST00000525936 HSP90AB3PQ58FF7 597 aa25.46■■□□□ 1.67
EXOSC4-202ENST00000525936 CCDC24Q8N4L8 307 aa25.46■■□□□ 1.67
EXOSC4-202ENST00000525936 KLRG2A4D1S0 409 aaPredicted RBP25.45■■□□□ 1.66
EXOSC4-202ENST00000525936 PDE6BP35913 854 aa25.45■■□□□ 1.66
EXOSC4-202ENST00000525936 PARP10Q53GL7 1025 aa25.45■■□□□ 1.66
EXOSC4-202ENST00000525936 SUSD4Q5VX71 490 aa25.45■■□□□ 1.66
EXOSC4-202ENST00000525936 PDZRN3Q9UPQ7 1066 aa25.45■■□□□ 1.66
EXOSC4-202ENST00000525936 GRIN3BO60391 1043 aa25.44■■□□□ 1.66
EXOSC4-202ENST00000525936 ST5P78524 1137 aa25.44■■□□□ 1.66
EXOSC4-202ENST00000525936 CDCA7LQ96GN5 454 aa25.44■■□□□ 1.66
EXOSC4-202ENST00000525936 NYXQ9GZU5 481 aa25.44■■□□□ 1.66
EXOSC4-202ENST00000525936 PIM2Q9P1W9 311 aa25.44■■□□□ 1.66
EXOSC4-202ENST00000525936 SLC4A2P04920 1241 aa25.43■■□□□ 1.66
EXOSC4-202ENST00000525936 PELP1Q8IZL8 1130 aaKnown RBP25.43■■□□□ 1.66
EXOSC4-202ENST00000525936 STK31Q9BXU1 1019 aa25.43■■□□□ 1.66
EXOSC4-202ENST00000525936 H0YIN7 160 aa25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 TCERG1O14776 1098 aaKnown RBP25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 NTSR2O95665 410 aa25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 TRIM28Q13263 835 aaKnown RBP25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 NLRP10Q86W26 655 aa25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 C2CD5Q86YS7 1000 aa25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
EXOSC4-202ENST00000525936 ANKRD36CQ5JPF3 1778 aa25.41■■□□□ 1.66
EXOSC4-202ENST00000525936 FAM177BA6PVY3 158 aa25.41■■□□□ 1.66
EXOSC4-202ENST00000525936 G2E3Q7L622 706 aa25.41■■□□□ 1.66
EXOSC4-202ENST00000525936 PPP1R42Q7Z4L9 355 aa25.41■■□□□ 1.66
EXOSC4-202ENST00000525936 WWC3Q9ULE0 1092 aa25.41■■□□□ 1.66
EXOSC4-202ENST00000525936 DLEC1Q9Y238 1755 aa25.41■■□□□ 1.66
EXOSC4-202ENST00000525936 RIC1Q4ADV7 1423 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 CACNA1FO60840 1977 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 NPHP1O15259 732 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 SRGNP10124 158 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 ERFEQ4G0M1 354 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 DALRD3Q5D0E6 543 aaKnown RBP25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 SLC10A5Q5PT55 438 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 NUTM1Q86Y26 1132 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 BCS1LQ9Y276 419 aa25.39■■□□□ 1.66
EXOSC4-202ENST00000525936 KSR2Q6VAB6 950 aa25.38■■□□□ 1.65
EXOSC4-202ENST00000525936 UTP14AQ9BVJ6 771 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms