RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 ST5P78524 1137 aa22.81■■□□□ 1.24
NR1H3-228ENST00000525441 PRR5LQ6MZQ0 368 aa22.81■■□□□ 1.24
NR1H3-228ENST00000525441 ZNF784Q8NCA9 323 aaPredicted RBP22.81■■□□□ 1.24
NR1H3-228ENST00000525441 BRIP1Q9BX63 1249 aa22.81■■□□□ 1.24
NR1H3-228ENST00000525441 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
NR1H3-228ENST00000525441 MAP3K15Q6ZN16 1313 aa22.81■■□□□ 1.24
NR1H3-228ENST00000525441 H0YIN7 160 aa22.8■■□□□ 1.24
NR1H3-228ENST00000525441 HOXB7P09629 217 aa22.8■■□□□ 1.24
NR1H3-228ENST00000525441 PDE6BP35913 854 aa22.8■■□□□ 1.24
NR1H3-228ENST00000525441 GNAI1P63096 354 aa22.8■■□□□ 1.24
NR1H3-228ENST00000525441 NBPF5PQ86XG9 351 aaPredicted RBP22.8■■□□□ 1.24
NR1H3-228ENST00000525441 C2CD5Q86YS7 1000 aa22.8■■□□□ 1.24
NR1H3-228ENST00000525441 NIP7Q9Y221 180 aaKnown RBP eCLIP22.8■■□□□ 1.24
NR1H3-228ENST00000525441 ZNF853P0CG23 659 aa22.78■■□□□ 1.24
NR1H3-228ENST00000525441 BRCA1P38398 1863 aaKnown RBP22.78■■□□□ 1.24
NR1H3-228ENST00000525441 HLFQ16534 295 aa22.78■■□□□ 1.24
NR1H3-228ENST00000525441 TTLL7Q6ZT98 887 aa22.78■■□□□ 1.24
NR1H3-228ENST00000525441 ARHGAP27Q6ZUM4 889 aa22.78■■□□□ 1.24
NR1H3-228ENST00000525441 MBIPQ9NS73 344 aa22.78■■□□□ 1.24
NR1H3-228ENST00000525441 KRT24Q2M2I5 525 aa22.77■■□□□ 1.24
NR1H3-228ENST00000525441 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
NR1H3-228ENST00000525441 PDIA6Q15084 440 aa22.76■■□□□ 1.23
NR1H3-228ENST00000525441 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
NR1H3-228ENST00000525441 NECTIN2Q92692 538 aa22.76■■□□□ 1.23
NR1H3-228ENST00000525441 HDGFL1Q5TGJ6 251 aa22.75■■□□□ 1.23
NR1H3-228ENST00000525441 CCDC24Q8N4L8 307 aa22.75■■□□□ 1.23
NR1H3-228ENST00000525441 TTLL6Q8N841 843 aa22.75■■□□□ 1.23
NR1H3-228ENST00000525441 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
NR1H3-228ENST00000525441 DDX21Q9NR30 783 aaKnown RBP eCLIP22.75■■□□□ 1.23
NR1H3-228ENST00000525441 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
NR1H3-228ENST00000525441 PROSER3Q2NL68 480 aa22.74■■□□□ 1.23
NR1H3-228ENST00000525441 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
NR1H3-228ENST00000525441 DUSP27Q5VZP5 1158 aa22.74■■□□□ 1.23
NR1H3-228ENST00000525441 LRP10Q7Z4F1 713 aa22.74■■□□□ 1.23
NR1H3-228ENST00000525441 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
NR1H3-228ENST00000525441 ANXA1P04083 346 aa22.73■■□□□ 1.23
NR1H3-228ENST00000525441 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
NR1H3-228ENST00000525441 ZNF622Q969S3 477 aaKnown RBP eCLIP22.73■■□□□ 1.23
NR1H3-228ENST00000525441 NYXQ9GZU5 481 aa22.73■■□□□ 1.23
NR1H3-228ENST00000525441 FAM177BA6PVY3 158 aa22.72■■□□□ 1.23
NR1H3-228ENST00000525441 GIGYF2Q6Y7W6 1299 aaKnown RBP22.72■■□□□ 1.23
NR1H3-228ENST00000525441 COPS6Q7L5N1 327 aa22.71■■□□□ 1.23
NR1H3-228ENST00000525441 WWC1Q8IX03 1113 aa22.71■■□□□ 1.23
NR1H3-228ENST00000525441 CHMP4AQ9BY43 222 aa22.71■■□□□ 1.23
NR1H3-228ENST00000525441 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
NR1H3-228ENST00000525441 DBF4Q9UBU7 674 aaPredicted RBP22.71■■□□□ 1.23
NR1H3-228ENST00000525441 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
NR1H3-228ENST00000525441 ANKRD31Q8N7Z5 1873 aa22.71■■□□□ 1.23
NR1H3-228ENST00000525441 AIMP1Q12904 312 aaKnown RBP22.7■■□□□ 1.22
NR1H3-228ENST00000525441 XAGE3Q8WTP9 111 aa22.7■■□□□ 1.22
NR1H3-228ENST00000525441 NUP98P52948 1817 aa22.7■■□□□ 1.22
NR1H3-228ENST00000525441 ADCY9O60503 1353 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 IBTKQ9P2D0 1353 aaPredicted RBP22.69■■□□□ 1.22
NR1H3-228ENST00000525441 GPTP24298 496 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 HSP90AB3PQ58FF7 597 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 STYK1Q6J9G0 422 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 FAM9BQ8IZU0 186 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 CNKSR1Q969H4 720 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 MASTLQ96GX5 879 aa22.69■■□□□ 1.22
NR1H3-228ENST00000525441 SRGNP10124 158 aa22.68■■□□□ 1.22
NR1H3-228ENST00000525441 PARP10Q53GL7 1025 aa22.68■■□□□ 1.22
NR1H3-228ENST00000525441 HYPKQ9NX55 129 aa22.68■■□□□ 1.22
NR1H3-228ENST00000525441 IL16Q14005 1332 aa22.67■■□□□ 1.22
NR1H3-228ENST00000525441 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
NR1H3-228ENST00000525441 PPP1R42Q7Z4L9 355 aa22.67■■□□□ 1.22
NR1H3-228ENST00000525441 UBN2Q6ZU65 1347 aa22.66■■□□□ 1.22
NR1H3-228ENST00000525441 KLRG2A4D1S0 409 aaPredicted RBP22.66■■□□□ 1.22
NR1H3-228ENST00000525441 ELL2O00472 640 aaPredicted RBP22.66■■□□□ 1.22
NR1H3-228ENST00000525441 NPR1P16066 1061 aa22.65■■□□□ 1.22
NR1H3-228ENST00000525441 SUSD4Q5VX71 490 aa22.65■■□□□ 1.22
NR1H3-228ENST00000525441 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
NR1H3-228ENST00000525441 C9orf131Q5VYM1 1079 aa22.64■■□□□ 1.21
NR1H3-228ENST00000525441 NUTM1Q86Y26 1132 aa22.64■■□□□ 1.21
NR1H3-228ENST00000525441 C8orf58Q8NAV2 365 aa22.64■■□□□ 1.21
NR1H3-228ENST00000525441 ERFEQ4G0M1 354 aa22.63■■□□□ 1.21
NR1H3-228ENST00000525441 WDR63Q8IWG1 891 aa22.63■■□□□ 1.21
NR1H3-228ENST00000525441 PLBD2Q8NHP8 589 aa22.63■■□□□ 1.21
NR1H3-228ENST00000525441 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
NR1H3-228ENST00000525441 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
NR1H3-228ENST00000525441 GPBP1L1Q9HC44 474 aaPredicted RBP22.63■■□□□ 1.21
NR1H3-228ENST00000525441 SALL2Q9Y467 1007 aaPredicted RBP22.63■■□□□ 1.21
NR1H3-228ENST00000525441 NTSR2O95665 410 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 TCIRG1Q13488 830 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 SOGA3Q5TF21 947 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 CCDC30Q5VVM6 783 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 PRPF40BQ6NWY9 871 aaKnown RBP22.62■■□□□ 1.21
NR1H3-228ENST00000525441 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 RNF181Q9P0P0 153 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 ABCC12Q96J65 1359 aa22.62■■□□□ 1.21
NR1H3-228ENST00000525441 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
NR1H3-228ENST00000525441 C21orf2O43822 256 aa22.61■■□□□ 1.21
NR1H3-228ENST00000525441 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
NR1H3-228ENST00000525441 ALDH1B1P30837 517 aa22.6■■□□□ 1.21
NR1H3-228ENST00000525441 ZNF526Q8TF50 670 aaPredicted RBP22.6■■□□□ 1.21
NR1H3-228ENST00000525441 ZNF219Q9P2Y4 722 aaPredicted RBP22.6■■□□□ 1.21
NR1H3-228ENST00000525441 LMNB1P20700 586 aa22.59■■□□□ 1.21
NR1H3-228ENST00000525441 RASSF7Q02833 373 aa22.59■■□□□ 1.21
NR1H3-228ENST00000525441 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
NR1H3-228ENST00000525441 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms