RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ST5P78524 1137 aa24.32■■□□□ 1.48
CAPN1-203ENST00000525013 NBPF5PQ86XG9 351 aaPredicted RBP24.32■■□□□ 1.48
CAPN1-203ENST00000525013 MYL6BP14649 208 aa24.31■■□□□ 1.48
CAPN1-203ENST00000525013 ZNF622Q969S3 477 aaKnown RBP eCLIP24.31■■□□□ 1.481e-7■■□□□ 11.9
CAPN1-203ENST00000525013 BABAM1Q9NWV8 329 aa24.31■■□□□ 1.48
CAPN1-203ENST00000525013 NIP7Q9Y221 180 aaKnown RBP eCLIP24.31■■□□□ 1.48
CAPN1-203ENST00000525013 PDZRN3Q9UPQ7 1066 aa24.3■■□□□ 1.48
CAPN1-203ENST00000525013 LAS1LQ9Y4W2 734 aaKnown RBP24.3■■□□□ 1.48
CAPN1-203ENST00000525013 EIF2S2P20042 333 aaKnown RBP24.29■■□□□ 1.48
CAPN1-203ENST00000525013 HLFQ16534 295 aa24.29■■□□□ 1.48
CAPN1-203ENST00000525013 C9orf131Q5VYM1 1079 aa24.29■■□□□ 1.48
CAPN1-203ENST00000525013 TRIM35Q9UPQ4 493 aa24.29■■□□□ 1.48
CAPN1-203ENST00000525013 FAM177BA6PVY3 158 aa24.28■■□□□ 1.48
CAPN1-203ENST00000525013 RGL2O15211 777 aa24.28■■□□□ 1.48
CAPN1-203ENST00000525013 KIF6Q6ZMV9 814 aa24.28■■□□□ 1.48
CAPN1-203ENST00000525013 NUP98P52948 1817 aa24.28■■□□□ 1.48
CAPN1-203ENST00000525013 SBF1O95248 1867 aa24.28■■□□□ 1.48
CAPN1-203ENST00000525013 TTLL7Q6ZT98 887 aa24.27■■□□□ 1.48
CAPN1-203ENST00000525013 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
CAPN1-203ENST00000525013 TPTE2Q6XPS3 522 aa24.26■■□□□ 1.47
CAPN1-203ENST00000525013 COL11A2P13942 1736 aaPredicted RBP24.26■■□□□ 1.47
CAPN1-203ENST00000525013 ERVV-1B6SEH8 477 aa24.25■■□□□ 1.47
CAPN1-203ENST00000525013 RNF181Q9P0P0 153 aa24.25■■□□□ 1.47
CAPN1-203ENST00000525013 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
CAPN1-203ENST00000525013 MAP3K15Q6ZN16 1313 aa24.25■■□□□ 1.47
CAPN1-203ENST00000525013 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
CAPN1-203ENST00000525013 CHL1O00533 1208 aa24.24■■□□□ 1.47
CAPN1-203ENST00000525013 GTF2E1P29083 439 aaPredicted RBP24.24■■□□□ 1.47
CAPN1-203ENST00000525013 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
CAPN1-203ENST00000525013 ZBTB3Q9H5J0 574 aa24.24■■□□□ 1.47
CAPN1-203ENST00000525013 ZNF219Q9P2Y4 722 aaPredicted RBP24.24■■□□□ 1.47
CAPN1-203ENST00000525013 APAF1O14727 1248 aa24.23■■□□□ 1.47
CAPN1-203ENST00000525013 RASSF7Q02833 373 aa24.23■■□□□ 1.47
CAPN1-203ENST00000525013 CCDC88AQ3V6T2 1871 aa24.23■■□□□ 1.47
CAPN1-203ENST00000525013 C21orf2O43822 256 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 ANXA1P04083 346 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 SRGNP10124 158 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 KRT24Q2M2I5 525 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
CAPN1-203ENST00000525013 SLX4Q8IY92 1834 aa24.2■■□□□ 1.46
CAPN1-203ENST00000525013 SENP3-EIF4A1A0A087X0R7 540 aa24.2■■□□□ 1.46
CAPN1-203ENST00000525013 GPTP24298 496 aa24.2■■□□□ 1.46
CAPN1-203ENST00000525013 PROSER3Q2NL68 480 aa24.2■■□□□ 1.46
CAPN1-203ENST00000525013 CCDC184Q52MB2 194 aa24.2■■□□□ 1.46
CAPN1-203ENST00000525013 LMNB1P20700 586 aa24.19■■□□□ 1.46
CAPN1-203ENST00000525013 PDIA6Q15084 440 aa24.19■■□□□ 1.46
CAPN1-203ENST00000525013 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
CAPN1-203ENST00000525013 NYXQ9GZU5 481 aa24.18■■□□□ 1.46
CAPN1-203ENST00000525013 PRPF40BQ6NWY9 871 aaKnown RBP24.17■■□□□ 1.46
CAPN1-203ENST00000525013 NFKBIEO00221 500 aa24.16■■□□□ 1.46
CAPN1-203ENST00000525013 ANP32CO43423 234 aa24.16■■□□□ 1.46
CAPN1-203ENST00000525013 NPR1P16066 1061 aa24.16■■□□□ 1.46
CAPN1-203ENST00000525013 AIMP1Q12904 312 aaKnown RBP24.16■■□□□ 1.46
CAPN1-203ENST00000525013 GIGYF2Q6Y7W6 1299 aaKnown RBP24.16■■□□□ 1.46
CAPN1-203ENST00000525013 LRP10Q7Z4F1 713 aa24.16■■□□□ 1.46
CAPN1-203ENST00000525013 NUTM1Q86Y26 1132 aa24.16■■□□□ 1.46
CAPN1-203ENST00000525013 KIF3CO14782 793 aa24.15■■□□□ 1.46
CAPN1-203ENST00000525013 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
CAPN1-203ENST00000525013 NMRK2Q9NPI5 230 aa24.15■■□□□ 1.46
CAPN1-203ENST00000525013 FER1L6Q2WGJ9 1857 aa24.15■■□□□ 1.46
CAPN1-203ENST00000525013 UBN2Q6ZU65 1347 aa24.14■■□□□ 1.46
CAPN1-203ENST00000525013 ARFGEF2Q9Y6D5 1785 aa24.14■■□□□ 1.46
CAPN1-203ENST00000525013 KLRG2A4D1S0 409 aaPredicted RBP24.14■■□□□ 1.45
CAPN1-203ENST00000525013 PRELPP51888 382 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 ERFEQ4G0M1 354 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 HDGFL1Q5TGJ6 251 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 COPS6Q7L5N1 327 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 ZNF34Q8IZ26 560 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 XAGE3Q8WTP9 111 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 DDX21Q9NR30 783 aaKnown RBP eCLIP24.14■■□□□ 1.45
CAPN1-203ENST00000525013 MBIPQ9NS73 344 aa24.14■■□□□ 1.45
CAPN1-203ENST00000525013 KDM2BQ8NHM5 1336 aa24.13■■□□□ 1.45
CAPN1-203ENST00000525013 SUSD4Q5VX71 490 aa24.13■■□□□ 1.45
CAPN1-203ENST00000525013 CHPF2Q9P2E5 772 aa24.13■■□□□ 1.45
CAPN1-203ENST00000525013 SOGA3Q5TF21 947 aa24.12■■□□□ 1.45
CAPN1-203ENST00000525013 DUSP27Q5VZP5 1158 aa24.12■■□□□ 1.45
CAPN1-203ENST00000525013 MRS2Q9HD23 443 aa24.12■■□□□ 1.45
CAPN1-203ENST00000525013 IFT57Q9NWB7 429 aa24.12■■□□□ 1.45
CAPN1-203ENST00000525013 ABCC12Q96J65 1359 aa24.12■■□□□ 1.45
CAPN1-203ENST00000525013 HOXB7P09629 217 aa24.11■■□□□ 1.45
CAPN1-203ENST00000525013 GNAI1P63096 354 aa24.11■■□□□ 1.45
CAPN1-203ENST00000525013 PPP1R42Q7Z4L9 355 aa24.11■■□□□ 1.45
CAPN1-203ENST00000525013 TAOK3Q9H2K8 898 aa24.11■■□□□ 1.45
CAPN1-203ENST00000525013 TNRC6CQ9HCJ0 1690 aaKnown RBP24.11■■□□□ 1.45
CAPN1-203ENST00000525013 ZNF853P0CG23 659 aa24.1■■□□□ 1.45
CAPN1-203ENST00000525013 PARP10Q53GL7 1025 aa24.1■■□□□ 1.45
CAPN1-203ENST00000525013 ZC3H4Q9UPT8 1303 aaKnown RBP24.1■■□□□ 1.45
CAPN1-203ENST00000525013 IBTKQ9P2D0 1353 aaPredicted RBP24.09■■□□□ 1.45
CAPN1-203ENST00000525013 ALDH1B1P30837 517 aa24.09■■□□□ 1.45
CAPN1-203ENST00000525013 DICER1Q9UPY3 1922 aaKnown RBP24.09■■□□□ 1.45
CAPN1-203ENST00000525013 TIAM2Q8IVF5 1701 aa24.09■■□□□ 1.45
CAPN1-203ENST00000525013 NTSR2O95665 410 aa24.08■■□□□ 1.45
CAPN1-203ENST00000525013 HSP90AB3PQ58FF7 597 aa24.08■■□□□ 1.45
CAPN1-203ENST00000525013 C16orf71Q8IYS4 520 aaPredicted RBP24.08■■□□□ 1.45
CAPN1-203ENST00000525013 RPGRQ92834 1020 aaKnown RBP24.08■■□□□ 1.45
CAPN1-203ENST00000525013 DBF4Q9UBU7 674 aaPredicted RBP24.08■■□□□ 1.45
CAPN1-203ENST00000525013 ANKRD36CQ5JPF3 1778 aa24.08■■□□□ 1.44
CAPN1-203ENST00000525013 ELL2O00472 640 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms