RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 GDPD2Q9HCC8 539 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 CWC15Q9P013 229 aaKnown RBP12.17□□□□□ -0.46
CTSC-203ENST00000524463 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
CTSC-203ENST00000524463 HSP90AA4PQ58FG1 418 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 SLF2Q8IX21 1173 aa12.17□□□□□ -0.46
CTSC-203ENST00000524463 ATAD2Q6PL18 1390 aa12.16□□□□□ -0.46
CTSC-203ENST00000524463 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
CTSC-203ENST00000524463 TFIP11Q9UBB9 837 aaKnown RBP12.16□□□□□ -0.46
CTSC-203ENST00000524463 CASKIN1Q8WXD9 1431 aa12.16□□□□□ -0.46
CTSC-203ENST00000524463 HSPA2P54652 639 aa12.16□□□□□ -0.46
CTSC-203ENST00000524463 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
CTSC-203ENST00000524463 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
CTSC-203ENST00000524463 KIAA1107Q9UPP5 1409 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
CTSC-203ENST00000524463 AAMPQ13685 434 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 PRKG1Q13976 671 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 CCDC40Q4G0X9 1142 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 CDK13Q14004 1512 aaKnown RBP12.15□□□□□ -0.46
CTSC-203ENST00000524463 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 TMCO5BA8MYB1 307 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 GJC1P36383 396 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 AMOTQ4VCS5 1084 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 PPP1R42Q7Z4L9 355 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 SBNO2Q9Y2G9 1366 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 TSPY3P0CV98 308 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 TSPY8P0CW00 308 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 MTIF2P46199 727 aaKnown RBP12.15□□□□□ -0.46
CTSC-203ENST00000524463 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
CTSC-203ENST00000524463 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
CTSC-203ENST00000524463 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.47
CTSC-203ENST00000524463 MAP3K11Q16584 847 aa12.15□□□□□ -0.47
CTSC-203ENST00000524463 TRMT1Q9NXH9 659 aaKnown RBP12.15□□□□□ -0.47
CTSC-203ENST00000524463 ARHGEF11O15085 1522 aa12.15□□□□□ -0.47
CTSC-203ENST00000524463 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 ARL1P40616 181 aaPredicted RBP12.14□□□□□ -0.47
CTSC-203ENST00000524463 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 LMAN1P49257 510 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 HEATR3Q7Z4Q2 680 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 CETN2P41208 172 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 CALM1P0DP23 149 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 CALM2P0DP24 149 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 CALM3P0DP25 149 aa12.14□□□□□ -0.47
CTSC-203ENST00000524463 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
CTSC-203ENST00000524463 HELBQ8NG08 1087 aaPredicted RBP12.14□□□□□ -0.47
CTSC-203ENST00000524463 CD109Q6YHK3 1445 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 BAG3O95817 575 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 HYPKQ9NX55 129 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 CYP7A1P22680 504 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 LUZP1Q86V48 1076 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTSC-203ENST00000524463 CASQ1P31415 396 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 RPAP2Q8IXW5 612 aaPredicted RBP12.13□□□□□ -0.47
CTSC-203ENST00000524463 SYNCQ9H7C4 482 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 WASLO00401 505 aaPredicted RBP12.13□□□□□ -0.47
CTSC-203ENST00000524463 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 UQCRHP07919 91 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 PDE4BQ07343 736 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 CALML4Q96GE6 196 aa12.13□□□□□ -0.47
CTSC-203ENST00000524463 NOP2P46087 812 aaKnown RBP12.12□□□□□ -0.47
CTSC-203ENST00000524463 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
CTSC-203ENST00000524463 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
CTSC-203ENST00000524463 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 RAB34Q9BZG1 259 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 ERLIN1O75477 346 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 TMEM110-MUSTN1A8MSY1 372 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 FLIIQ13045 1269 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 IQCEQ6IPM2 695 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 OTUD6BQ8N6M0 293 aa12.12□□□□□ -0.47
CTSC-203ENST00000524463 AFMP43652 599 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 CCDC91Q7Z6B0 441 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 FSIP1Q8NA03 581 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
CTSC-203ENST00000524463 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
CTSC-203ENST00000524463 PROCA1Q8NCQ7 364 aaPredicted RBP12.11□□□□□ -0.47
CTSC-203ENST00000524463 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms